RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 ANXA1P04083 346 aa19.42■□□□□ 0.7
NDE1-203ENST00000570727 C3orf67Q6ZVT6 689 aa19.42■□□□□ 0.7
NDE1-203ENST00000570727 PSMD1Q99460 953 aa19.42■□□□□ 0.7
NDE1-203ENST00000570727 IQCA1LA6NCM1 817 aa19.41■□□□□ 0.7
NDE1-203ENST00000570727 CCDC146Q8IYE0 955 aa19.41■□□□□ 0.7
NDE1-203ENST00000570727 CRAMP1Q96RY5 1269 aa19.41■□□□□ 0.7
NDE1-203ENST00000570727 MYBBP1AQ9BQG0 1328 aaKnown RBP19.41■□□□□ 0.7
NDE1-203ENST00000570727 LMOD3Q0VAK6 560 aa19.4■□□□□ 0.7
NDE1-203ENST00000570727 PARP10Q53GL7 1025 aa19.4■□□□□ 0.7
NDE1-203ENST00000570727 CC2D2BQ6DHV5 1058 aa19.4■□□□□ 0.7
NDE1-203ENST00000570727 PPP1R42Q7Z4L9 355 aa19.4■□□□□ 0.7
NDE1-203ENST00000570727 SLC51AQ86UW1 340 aa19.4■□□□□ 0.7
NDE1-203ENST00000570727 RPGRQ92834 1020 aaKnown RBP19.4■□□□□ 0.7
NDE1-203ENST00000570727 CHL1O00533 1208 aa19.39■□□□□ 0.69
NDE1-203ENST00000570727 NEUROD2Q15784 382 aa19.39■□□□□ 0.69
NDE1-203ENST00000570727 SLC10A5Q5PT55 438 aa19.39■□□□□ 0.69
NDE1-203ENST00000570727 LDHDQ86WU2 507 aa19.39■□□□□ 0.69
NDE1-203ENST00000570727 TRIM35Q9UPQ4 493 aa19.39■□□□□ 0.69
NDE1-203ENST00000570727 COL4A5P29400 1685 aa19.38■□□□□ 0.69
NDE1-203ENST00000570727 KRT24Q2M2I5 525 aa19.38■□□□□ 0.69
NDE1-203ENST00000570727 COL13A1Q5TAT6 717 aaPredicted RBP19.38■□□□□ 0.69
NDE1-203ENST00000570727 COPS6Q7L5N1 327 aa19.38■□□□□ 0.69
NDE1-203ENST00000570727 NECTIN2Q92692 538 aa19.38■□□□□ 0.69
NDE1-203ENST00000570727 RBM17Q96I25 401 aaKnown RBP19.38■□□□□ 0.69
NDE1-203ENST00000570727 CREBZFQ9NS37 354 aa19.38■□□□□ 0.69
NDE1-203ENST00000570727 PASKQ96RG2 1323 aa19.37■□□□□ 0.69
NDE1-203ENST00000570727 RUNDC1Q96C34 613 aa19.37■□□□□ 0.69
NDE1-203ENST00000570727 NLRP3Q96P20 1036 aa19.37■□□□□ 0.69
NDE1-203ENST00000570727 UTP14AQ9BVJ6 771 aaKnown RBP19.37■□□□□ 0.69
NDE1-203ENST00000570727 HACL1Q9UJ83 578 aa19.37■□□□□ 0.69
NDE1-203ENST00000570727 TCERG1O14776 1098 aaKnown RBP19.36■□□□□ 0.69
NDE1-203ENST00000570727 ITGBL1O95965 494 aaPredicted RBP19.36■□□□□ 0.69
NDE1-203ENST00000570727 GRIPAP1Q4V328 841 aa19.36■□□□□ 0.69
NDE1-203ENST00000570727 GPC2Q8N158 579 aa19.36■□□□□ 0.69
NDE1-203ENST00000570727 XAGE3Q8WTP9 111 aa19.36■□□□□ 0.69
NDE1-203ENST00000570727 JDP2Q8WYK2 163 aa19.36■□□□□ 0.69
NDE1-203ENST00000570727 ADAMTS8Q9UP79 889 aa19.36■□□□□ 0.69
NDE1-203ENST00000570727 PPEF1O14829 653 aaPredicted RBP19.35■□□□□ 0.69
NDE1-203ENST00000570727 EPHX2P34913 555 aa19.35■□□□□ 0.69
NDE1-203ENST00000570727 AIMP1Q12904 312 aaKnown RBP19.35■□□□□ 0.69
NDE1-203ENST00000570727 EAPPQ56P03 285 aaPredicted RBP19.35■□□□□ 0.69
NDE1-203ENST00000570727 DDX21Q9NR30 783 aaKnown RBP eCLIP19.35■□□□□ 0.69
NDE1-203ENST00000570727 ADAMTSL1Q8N6G6 1762 aa19.34■□□□□ 0.69
NDE1-203ENST00000570727 RNF123Q5XPI4 1314 aa19.34■□□□□ 0.69
NDE1-203ENST00000570727 HSPA1AP0DMV8 641 aaKnown RBP19.34■□□□□ 0.69
NDE1-203ENST00000570727 HSPA1BP0DMV9 641 aaKnown RBP19.34■□□□□ 0.69
NDE1-203ENST00000570727 TCIRG1Q13488 830 aa19.34■□□□□ 0.69
NDE1-203ENST00000570727 NLRP10Q86W26 655 aa19.34■□□□□ 0.69
NDE1-203ENST00000570727 LAS1LQ9Y4W2 734 aaKnown RBP19.34■□□□□ 0.69
NDE1-203ENST00000570727 ANKRD36CQ5JPF3 1778 aa19.34■□□□□ 0.69
NDE1-203ENST00000570727 MKRN1Q9UHC7 482 aaKnown RBP19.33■□□□□ 0.68
NDE1-203ENST00000570727 LAMB2P55268 1798 aa19.32■□□□□ 0.68
NDE1-203ENST00000570727 WDR43Q15061 677 aaKnown RBP eCLIP19.32■□□□□ 0.68
NDE1-203ENST00000570727 HSP90AB3PQ58FF7 597 aa19.32■□□□□ 0.68
NDE1-203ENST00000570727 PNMA8AQ86V59 439 aaPredicted RBP19.32■□□□□ 0.68
NDE1-203ENST00000570727 LARGE2Q8N3Y3 721 aa19.32■□□□□ 0.68
NDE1-203ENST00000570727 CLEC11AQ9Y240 323 aa19.32■□□□□ 0.68
NDE1-203ENST00000570727 ATP6V0A2Q9Y487 856 aa19.32■□□□□ 0.68
NDE1-203ENST00000570727 GJA3Q9Y6H8 435 aa19.32■□□□□ 0.68
NDE1-203ENST00000570727 ABCC4O15439 1325 aa19.31■□□□□ 0.68
NDE1-203ENST00000570727 HCLS1P14317 486 aaPredicted RBP19.31■□□□□ 0.68
NDE1-203ENST00000570727 EIF6P56537 245 aaKnown RBP19.31■□□□□ 0.68
NDE1-203ENST00000570727 CHPF2Q9P2E5 772 aa19.31■□□□□ 0.68
NDE1-203ENST00000570727 CNTROBQ8N137 903 aa19.3■□□□□ 0.68
NDE1-203ENST00000570727 LTBP1Q14766 1721 aa19.3■□□□□ 0.68
NDE1-203ENST00000570727 TAF1P21675 1872 aa19.3■□□□□ 0.68
NDE1-203ENST00000570727 TMEM88BA6NKF7 163 aa19.29■□□□□ 0.68
NDE1-203ENST00000570727 BBOX1O75936 387 aa19.29■□□□□ 0.68
NDE1-203ENST00000570727 MAP1SQ66K74 1059 aaPredicted RBP19.29■□□□□ 0.68
NDE1-203ENST00000570727 VPS33BQ9H267 617 aa19.29■□□□□ 0.68
NDE1-203ENST00000570727 TRMT112Q9UI30 125 aaKnown RBP19.29■□□□□ 0.68
NDE1-203ENST00000570727 CNTNAP1P78357 1384 aa19.29■□□□□ 0.68
NDE1-203ENST00000570727 EPS15P42566 896 aa19.28■□□□□ 0.68
NDE1-203ENST00000570727 SCNN1DP51172 638 aa19.28■□□□□ 0.68
NDE1-203ENST00000570727 AOC3Q16853 763 aa19.28■□□□□ 0.68
NDE1-203ENST00000570727 HDGFL1Q5TGJ6 251 aa19.28■□□□□ 0.68
NDE1-203ENST00000570727 SP8Q8IXZ3 490 aa19.28■□□□□ 0.68
NDE1-203ENST00000570727 PLBD2Q8NHP8 589 aa19.28■□□□□ 0.68
NDE1-203ENST00000570727 ZNF428Q96B54 188 aa19.28■□□□□ 0.68
NDE1-203ENST00000570727 CFAP44Q96MT7 982 aa19.28■□□□□ 0.68
NDE1-203ENST00000570727 RTFDC1Q9BY42 306 aaPredicted RBP19.28■□□□□ 0.68
NDE1-203ENST00000570727 PRKRIP1Q9H875 184 aaPredicted RBP19.28■□□□□ 0.68
NDE1-203ENST00000570727 SH3TC1Q8TE82 1336 aa19.27■□□□□ 0.68
NDE1-203ENST00000570727 PPIP5K2O43314 1243 aa19.27■□□□□ 0.68
NDE1-203ENST00000570727 HOXB7P09629 217 aa19.27■□□□□ 0.68
NDE1-203ENST00000570727 ANKRD13DQ6ZTN6 518 aa19.27■□□□□ 0.68
NDE1-203ENST00000570727 TMX4Q9H1E5 349 aaPredicted RBP19.27■□□□□ 0.68
NDE1-203ENST00000570727 ZNF853P0CG23 659 aa19.26■□□□□ 0.67
NDE1-203ENST00000570727 DUSP27Q5VZP5 1158 aa19.26■□□□□ 0.67
NDE1-203ENST00000570727 NIM1KQ8IY84 436 aa19.26■□□□□ 0.67
NDE1-203ENST00000570727 ISCA1Q9BUE6 129 aa19.26■□□□□ 0.67
NDE1-203ENST00000570727 MBIPQ9NS73 344 aa19.26■□□□□ 0.67
NDE1-203ENST00000570727 DBF4Q9UBU7 674 aaPredicted RBP19.26■□□□□ 0.67
NDE1-203ENST00000570727 LMOD1P29536 600 aaPredicted RBP19.25■□□□□ 0.67
NDE1-203ENST00000570727 VEGFBP49765 207 aa19.25■□□□□ 0.67
NDE1-203ENST00000570727 DDX46Q7L014 1031 aaKnown RBP19.25■□□□□ 0.67
NDE1-203ENST00000570727 CXCL9Q07325 125 aa19.24■□□□□ 0.67
NDE1-203ENST00000570727 GRAPQ13588 217 aa19.24■□□□□ 0.67
NDE1-203ENST00000570727 DPP8Q6V1X1 898 aaPredicted RBP19.24■□□□□ 0.67
NDE1-203ENST00000570727 TNS4Q8IZW8 715 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms