RNA–Protein interactions for RNA: ENST00000569251.5

SCAMP2-211, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 867 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-211ENST00000569251 COPS6Q7L5N1 327 aa16.83■□□□□ 0.28
SCAMP2-211ENST00000569251 PPP1R42Q7Z4L9 355 aa16.83■□□□□ 0.28
SCAMP2-211ENST00000569251 RTKN2Q8IZC4 609 aa16.83■□□□□ 0.28
SCAMP2-211ENST00000569251 NECTIN2Q92692 538 aa16.83■□□□□ 0.28
SCAMP2-211ENST00000569251 DDX21Q9NR30 783 aaKnown RBP eCLIP16.83■□□□□ 0.28
SCAMP2-211ENST00000569251 LAS1LQ9Y4W2 734 aaKnown RBP16.83■□□□□ 0.28
SCAMP2-211ENST00000569251 XAGE3Q8WTP9 111 aa16.82■□□□□ 0.28
SCAMP2-211ENST00000569251 CFAP44Q96MT7 982 aa16.82■□□□□ 0.28
SCAMP2-211ENST00000569251 DDNO94850 711 aaPredicted RBP16.81■□□□□ 0.28
SCAMP2-211ENST00000569251 HOXB7P09629 217 aa16.81■□□□□ 0.28
SCAMP2-211ENST00000569251 SLC10A5Q5PT55 438 aa16.81■□□□□ 0.28
SCAMP2-211ENST00000569251 C3orf67Q6ZVT6 689 aa16.81■□□□□ 0.28
SCAMP2-211ENST00000569251 RPGRQ92834 1020 aaKnown RBP16.81■□□□□ 0.28
SCAMP2-211ENST00000569251 ZNF277Q9NRM2 450 aaPredicted RBP16.81■□□□□ 0.28
SCAMP2-211ENST00000569251 DDX60Q8IY21 1712 aaKnown RBP16.81■□□□□ 0.28
SCAMP2-211ENST00000569251 AIMP1Q12904 312 aaKnown RBP16.8■□□□□ 0.28
SCAMP2-211ENST00000569251 CRAMP1Q96RY5 1269 aa16.8■□□□□ 0.28
SCAMP2-211ENST00000569251 PSMD1Q99460 953 aa16.8■□□□□ 0.28
SCAMP2-211ENST00000569251 UTP14AQ9BVJ6 771 aaKnown RBP16.8■□□□□ 0.28
SCAMP2-211ENST00000569251 APAF1O14727 1248 aa16.79■□□□□ 0.28
SCAMP2-211ENST00000569251 ZNF853P0CG23 659 aa16.79■□□□□ 0.28
SCAMP2-211ENST00000569251 HTRA3P83110 453 aa16.79■□□□□ 0.28
SCAMP2-211ENST00000569251 TCIRG1Q13488 830 aa16.79■□□□□ 0.28
SCAMP2-211ENST00000569251 HSP90AB3PQ58FF7 597 aa16.79■□□□□ 0.28
SCAMP2-211ENST00000569251 HDGFL1Q5TGJ6 251 aa16.79■□□□□ 0.28
SCAMP2-211ENST00000569251 CC2D2BQ6DHV5 1058 aa16.79■□□□□ 0.28
SCAMP2-211ENST00000569251 SYNE4Q8N205 404 aa16.79■□□□□ 0.28
SCAMP2-211ENST00000569251 RBM17Q96I25 401 aaKnown RBP16.79■□□□□ 0.28
SCAMP2-211ENST00000569251 CHPF2Q9P2E5 772 aa16.79■□□□□ 0.28
SCAMP2-211ENST00000569251 RNF123Q5XPI4 1314 aa16.78■□□□□ 0.28
SCAMP2-211ENST00000569251 IARSP41252 1262 aaKnown RBP16.78■□□□□ 0.28
SCAMP2-211ENST00000569251 NLRP10Q86W26 655 aa16.78■□□□□ 0.28
SCAMP2-211ENST00000569251 L3MBTL3Q96JM7 780 aaPredicted RBP16.78■□□□□ 0.28
SCAMP2-211ENST00000569251 NLRP3Q96P20 1036 aa16.78■□□□□ 0.28
SCAMP2-211ENST00000569251 MBIPQ9NS73 344 aa16.78■□□□□ 0.28
SCAMP2-211ENST00000569251 DUSP27Q5VZP5 1158 aa16.77■□□□□ 0.28
SCAMP2-211ENST00000569251 DBF4Q9UBU7 674 aaPredicted RBP16.77■□□□□ 0.28
SCAMP2-211ENST00000569251 COL4A5P29400 1685 aa16.77■□□□□ 0.28
SCAMP2-211ENST00000569251 ZNF541Q9H0D2 1346 aa16.76■□□□□ 0.27
SCAMP2-211ENST00000569251 FZD9O00144 591 aa16.76■□□□□ 0.27
SCAMP2-211ENST00000569251 GRIPAP1Q4V328 841 aa16.76■□□□□ 0.27
SCAMP2-211ENST00000569251 SLC51AQ86UW1 340 aa16.76■□□□□ 0.27
SCAMP2-211ENST00000569251 KLRG1Q96E93 195 aa16.76■□□□□ 0.27
SCAMP2-211ENST00000569251 CACNA1FO60840 1977 aa16.76■□□□□ 0.27
SCAMP2-211ENST00000569251 ADAMTSL1Q8N6G6 1762 aa16.75■□□□□ 0.27
SCAMP2-211ENST00000569251 PPEF1O14829 653 aaPredicted RBP16.75■□□□□ 0.27
SCAMP2-211ENST00000569251 PLBD2Q8NHP8 589 aa16.75■□□□□ 0.27
SCAMP2-211ENST00000569251 IFT57Q9NWB7 429 aa16.75■□□□□ 0.27
SCAMP2-211ENST00000569251 IQCA1LA6NCM1 817 aa16.74■□□□□ 0.27
SCAMP2-211ENST00000569251 POTEIP0CG38 1075 aa16.74■□□□□ 0.27
SCAMP2-211ENST00000569251 POTEJP0CG39 1038 aa16.74■□□□□ 0.27
SCAMP2-211ENST00000569251 HCLS1P14317 486 aaPredicted RBP16.74■□□□□ 0.27
SCAMP2-211ENST00000569251 GNAI1P63096 354 aa16.74■□□□□ 0.27
SCAMP2-211ENST00000569251 CCDC184Q52MB2 194 aa16.74■□□□□ 0.27
SCAMP2-211ENST00000569251 ANKRD13DQ6ZTN6 518 aa16.74■□□□□ 0.27
SCAMP2-211ENST00000569251 HYPKQ9NX55 129 aa16.74■□□□□ 0.27
SCAMP2-211ENST00000569251 TRMT112Q9UI30 125 aaKnown RBP16.74■□□□□ 0.27
SCAMP2-211ENST00000569251 LRRC37AA6NMS7 1700 aa16.73■□□□□ 0.27
SCAMP2-211ENST00000569251 ABCC4O15439 1325 aa16.73■□□□□ 0.27
SCAMP2-211ENST00000569251 SH3TC1Q8TE82 1336 aa16.73■□□□□ 0.27
SCAMP2-211ENST00000569251 TCERG1O14776 1098 aaKnown RBP16.73■□□□□ 0.27
SCAMP2-211ENST00000569251 ZEB1P37275 1124 aaPredicted RBP16.73■□□□□ 0.27
SCAMP2-211ENST00000569251 CALD1Q05682 793 aaKnown RBP16.73■□□□□ 0.27
SCAMP2-211ENST00000569251 CHADLQ6NUI6 762 aa16.73■□□□□ 0.27
SCAMP2-211ENST00000569251 ISCA1Q9BUE6 129 aa16.73■□□□□ 0.27
SCAMP2-211ENST00000569251 TAF1DQ9H5J8 278 aaPredicted RBP16.73■□□□□ 0.27
SCAMP2-211ENST00000569251 ATP6V0A2Q9Y487 856 aa16.73■□□□□ 0.27
SCAMP2-211ENST00000569251 JMYQ8N9B5 988 aa16.72■□□□□ 0.27
SCAMP2-211ENST00000569251 JDP2Q8WYK2 163 aa16.72■□□□□ 0.27
SCAMP2-211ENST00000569251 LTBP1Q14766 1721 aa16.72■□□□□ 0.27
SCAMP2-211ENST00000569251 BBOX1O75936 387 aa16.71■□□□□ 0.27
SCAMP2-211ENST00000569251 GPC2Q8N158 579 aa16.71■□□□□ 0.27
SCAMP2-211ENST00000569251 MYH3P11055 1940 aa16.7■□□□□ 0.26
SCAMP2-211ENST00000569251 ELL2O00472 640 aaPredicted RBP16.7■□□□□ 0.26
SCAMP2-211ENST00000569251 LDHDQ86WU2 507 aa16.7■□□□□ 0.26
SCAMP2-211ENST00000569251 LARGE2Q8N3Y3 721 aa16.7■□□□□ 0.26
SCAMP2-211ENST00000569251 C8orf58Q8NAV2 365 aa16.7■□□□□ 0.26
SCAMP2-211ENST00000569251 ZNF428Q96B54 188 aa16.7■□□□□ 0.26
SCAMP2-211ENST00000569251 HACL1Q9UJ83 578 aa16.7■□□□□ 0.26
SCAMP2-211ENST00000569251 ATP5J2-PTCD1G3V325 749 aa16.69■□□□□ 0.26
SCAMP2-211ENST00000569251 TRIM28Q13263 835 aaKnown RBP16.69■□□□□ 0.26
SCAMP2-211ENST00000569251 DDX46Q7L014 1031 aaKnown RBP16.69■□□□□ 0.26
SCAMP2-211ENST00000569251 SP8Q8IXZ3 490 aa16.69■□□□□ 0.26
SCAMP2-211ENST00000569251 TMX4Q9H1E5 349 aaPredicted RBP16.69■□□□□ 0.26
SCAMP2-211ENST00000569251 TRPM7Q96QT4 1865 aa16.68■□□□□ 0.26
SCAMP2-211ENST00000569251 EPHX2P34913 555 aa16.68■□□□□ 0.26
SCAMP2-211ENST00000569251 EIF6P56537 245 aaKnown RBP16.68■□□□□ 0.26
SCAMP2-211ENST00000569251 GRAPQ13588 217 aa16.68■□□□□ 0.26
SCAMP2-211ENST00000569251 GRAPLQ8TC17 118 aaPredicted RBP16.68■□□□□ 0.26
SCAMP2-211ENST00000569251 FAM89AQ96GI7 184 aa16.68■□□□□ 0.26
SCAMP2-211ENST00000569251 RTFDC1Q9BY42 306 aaPredicted RBP16.68■□□□□ 0.26
SCAMP2-211ENST00000569251 VPS33BQ9H267 617 aa16.68■□□□□ 0.26
SCAMP2-211ENST00000569251 PHAXQ9H814 394 aaKnown RBP16.68■□□□□ 0.26
SCAMP2-211ENST00000569251 PASKQ96RG2 1323 aa16.68■□□□□ 0.26
SCAMP2-211ENST00000569251 COL4A1P02462 1669 aa16.67■□□□□ 0.26
SCAMP2-211ENST00000569251 SF3B3Q15393 1217 aaKnown RBP16.67■□□□□ 0.26
SCAMP2-211ENST00000569251 CCDC27Q2M243 656 aa16.67■□□□□ 0.26
SCAMP2-211ENST00000569251 DUOX1Q9NRD9 1551 aa16.67■□□□□ 0.26
SCAMP2-211ENST00000569251 POLR2AP24928 1970 aaKnown RBP16.66■□□□□ 0.26
SCAMP2-211ENST00000569251 PPIP5K2O43314 1243 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms