RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 GOLGA8KD6RF30 607 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 MAGEA9P43362 315 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 PPP2R3AQ06190 1150 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 C1orf141Q5JVX7 400 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 PPP1R1BQ9UD71 204 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-216ENST00000569240 TSPYL4Q9UJ04 414 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 DBN1Q16643 649 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 FSIP1Q8NA03 581 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 SREK1Q8WXA9 508 aaKnown RBP8.13□□□□□ -1.11
CNOT1-216ENST00000569240 JAKMIP2Q96AA8 810 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 RAI14Q9P0K7 980 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 BCAP29Q9UHQ4 241 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 PSDA5PKW4 1024 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-216ENST00000569240 TBC1D9Q6ZT07 1266 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 RPUSD2Q8IZ73 545 aaKnown RBP8.13□□□□□ -1.11
CNOT1-216ENST00000569240 CCDC51Q96ER9 411 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 NCAPD3P42695 1498 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 F13A1P00488 732 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 ACTN2P35609 894 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 BRPF1P55201 1214 aaPredicted RBP8.13□□□□□ -1.11
CNOT1-216ENST00000569240 UBASH3AP57075 661 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 TTC22Q5TAA0 569 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 PPP2R5EQ16537 467 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 P3H4Q92791 437 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 TBC1D31Q96DN5 1066 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 CABS1Q96KC9 395 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 FAN1Q9Y2M0 1017 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 NBPF9Q3BBW0 867 aa8.13□□□□□ -1.11
CNOT1-216ENST00000569240 MRPS27Q92552 414 aaKnown RBP8.13□□□□□ -1.11
CNOT1-216ENST00000569240 NUCKS1Q9H1E3 243 aaKnown RBP8.13□□□□□ -1.11
CNOT1-216ENST00000569240 DYNC1I2Q13409 638 aaKnown RBP8.12□□□□□ -1.11
CNOT1-216ENST00000569240 HLTFQ14527 1009 aaKnown RBP eCLIP8.12□□□□□ -1.11
CNOT1-216ENST00000569240 PRXQ9BXM0 1461 aa8.12□□□□□ -1.11
CNOT1-216ENST00000569240 SKIDA1Q1XH10 827 aa8.12□□□□□ -1.11
CNOT1-216ENST00000569240 TMX3Q96JJ7 454 aa8.12□□□□□ -1.11
CNOT1-216ENST00000569240 NUP88Q99567 741 aaPredicted RBP8.12□□□□□ -1.11
CNOT1-216ENST00000569240 TTC12Q9H892 705 aaPredicted RBP8.12□□□□□ -1.11
CNOT1-216ENST00000569240 GOLGA6CA6NDK9 693 aa8.12□□□□□ -1.11
CNOT1-216ENST00000569240 GOLGA6DP0CG33 693 aa8.12□□□□□ -1.11
CNOT1-216ENST00000569240 GOLGA6AQ9NYA3 693 aa8.12□□□□□ -1.11
CNOT1-216ENST00000569240 SYT1P21579 422 aa8.12□□□□□ -1.11
CNOT1-216ENST00000569240 CDC25BP30305 580 aa8.12□□□□□ -1.11
CNOT1-216ENST00000569240 AMPD3Q01432 767 aa8.12□□□□□ -1.11
CNOT1-216ENST00000569240 MAP3K21Q5TCX8 1036 aa8.12□□□□□ -1.11
CNOT1-216ENST00000569240 RABGGTAQ92696 567 aa8.12□□□□□ -1.11
CNOT1-216ENST00000569240 FBXW7Q969H0 707 aa8.12□□□□□ -1.11
CNOT1-216ENST00000569240 RAB3IPQ96QF0 476 aaPredicted RBP8.12□□□□□ -1.11
CNOT1-216ENST00000569240 PDS5BQ9NTI5 1447 aa8.12□□□□□ -1.11
CNOT1-216ENST00000569240 GFM2Q969S9 779 aaKnown RBP8.12□□□□□ -1.11
CNOT1-216ENST00000569240 NAP1L3Q99457 506 aaPredicted RBP8.12□□□□□ -1.11
CNOT1-216ENST00000569240 GEMIN8Q9NWZ8 242 aaKnown RBP8.12□□□□□ -1.11
CNOT1-216ENST00000569240 FLOT1O75955 427 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 U2AF2P26368 475 aaKnown RBP eCLIP8.11□□□□□ -1.113e-7■■□□□ 12.4
CNOT1-216ENST00000569240 AMOTQ4VCS5 1084 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 PHLDB3Q6NSJ2 640 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 CCDC65Q8IXS2 484 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 RAB34Q9BZG1 259 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 TCEAL9Q9UHQ7 104 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 OAS2P29728 719 aaKnown RBP8.11□□□□□ -1.11
CNOT1-216ENST00000569240 PDE6BP35913 854 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 MTHFSP49914 203 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 WASHC4Q2M389 1173 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 ANO6Q4KMQ2 910 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 PLCB1Q9NQ66 1216 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 NEBLO76041 1014 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 PCK1P35558 622 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 CHMP4BP1P59074 171 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 CNNM3Q8NE01 707 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 ZMAT2Q96NC0 199 aaKnown RBP8.11□□□□□ -1.11
CNOT1-216ENST00000569240 MTRF1LQ9UGC7 380 aaKnown RBP8.11□□□□□ -1.11
CNOT1-216ENST00000569240 HDAC9Q9UKV0 1011 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 IQSEC3Q9UPP2 1182 aaPredicted RBP8.11□□□□□ -1.11
CNOT1-216ENST00000569240 EVI5O60447 810 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 MAP4K4O95819 1239 aaPredicted RBP8.11□□□□□ -1.11
CNOT1-216ENST00000569240 MRFAP1L1Q96HT8 127 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 C8orf76Q96K31 380 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 CCDC43Q96MW1 224 aaKnown RBP8.11□□□□□ -1.11
CNOT1-216ENST00000569240 SCLT1Q96NL6 688 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 BATF3Q9NR55 127 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 AKAP2Q9Y2D5 859 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 LRRD1A4D1F6 860 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 STMN2Q93045 179 aa8.11□□□□□ -1.11
CNOT1-216ENST00000569240 RRP15Q9Y3B9 282 aaKnown RBP8.11□□□□□ -1.11
CNOT1-216ENST00000569240 CTNNBL1Q8WYA6 563 aaPredicted RBP8.11□□□□□ -1.11
CNOT1-216ENST00000569240 PSMD7P51665 324 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 USP48Q86UV5 1035 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 KIAA1524Q8TCG1 905 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 SEC62Q99442 399 aaKnown RBP8.1□□□□□ -1.11
CNOT1-216ENST00000569240 RABGAP1Q9Y3P9 1069 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 ZMYM4Q5VZL5 1548 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 KIF5AQ12840 1032 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 RPRD2Q5VT52 1461 aaKnown RBP8.1□□□□□ -1.11
CNOT1-216ENST00000569240 FBXO3Q9UK99 471 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 ELL2O00472 640 aaPredicted RBP8.1□□□□□ -1.11
CNOT1-216ENST00000569240 NAPGQ99747 312 aaPredicted RBP8.1□□□□□ -1.11
CNOT1-216ENST00000569240 SH3GL3Q99963 347 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 MYO1AQ9UBC5 1043 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 NAIPQ13075 1403 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 ARAP1Q96P48 1450 aa8.1□□□□□ -1.11
CNOT1-216ENST00000569240 CHUKO15111 745 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms