RNA–Protein interactions for RNA: ENST00000569005.5

EIF3C-213, Transcript of eukaryotic translation initiation factor 3 subunit C, human

TSL 5

Gene EIF3C, Length 610 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EIF3C-213	ENST00000569005	EAPP	Q56P03	285 aa	Predicted RBP	14.03	□□□□□ -0.16
EIF3C-213	ENST00000569005	KIF6	Q6ZMV9	814 aa		14.03	□□□□□ -0.16
EIF3C-213	ENST00000569005	RTKN2	Q8IZC4	609 aa		14.03	□□□□□ -0.16
EIF3C-213	ENST00000569005	SYNE4	Q8N205	404 aa		14.03	□□□□□ -0.16
EIF3C-213	ENST00000569005	BABAM1	Q9NWV8	329 aa		14.03	□□□□□ -0.16
EIF3C-213	ENST00000569005	ADAMTSL1	Q8N6G6	1762 aa		14.03	□□□□□ -0.16
EIF3C-213	ENST00000569005	PASK	Q96RG2	1323 aa		14.02	□□□□□ -0.17
EIF3C-213	ENST00000569005	MYBBP1A	Q9BQG0	1328 aa	Known RBP	14.02	□□□□□ -0.17
EIF3C-213	ENST00000569005	FZD9	O00144	591 aa		14.02	□□□□□ -0.17
EIF3C-213	ENST00000569005	ITGBL1	O95965	494 aa	Predicted RBP	14.02	□□□□□ -0.17
EIF3C-213	ENST00000569005	ANXA1	P04083	346 aa		14.02	□□□□□ -0.17
EIF3C-213	ENST00000569005	GTF2E1	P29083	439 aa	Predicted RBP	14.02	□□□□□ -0.17
EIF3C-213	ENST00000569005	ALDH1B1	P30837	517 aa		14.02	□□□□□ -0.17
EIF3C-213	ENST00000569005	DDX10	Q13206	875 aa	Known RBP	14.01	□□□□□ -0.17
EIF3C-213	ENST00000569005	LDHD	Q86WU2	507 aa		14.01	□□□□□ -0.17
EIF3C-213	ENST00000569005	PSMD1	Q99460	953 aa		14.01	□□□□□ -0.17
EIF3C-213	ENST00000569005	CLEC11A	Q9Y240	323 aa		14.01	□□□□□ -0.17
EIF3C-213	ENST00000569005	TCERG1	O14776	1098 aa	Known RBP	14	□□□□□ -0.17
EIF3C-213	ENST00000569005	FOXN1	O15353	648 aa		14	□□□□□ -0.17
EIF3C-213	ENST00000569005	IARS	P41252	1262 aa	Known RBP	14	□□□□□ -0.17
EIF3C-213	ENST00000569005	VEGFB	P49765	207 aa		14	□□□□□ -0.17
EIF3C-213	ENST00000569005	KRT24	Q2M2I5	525 aa		14	□□□□□ -0.17
EIF3C-213	ENST00000569005	MAP1S	Q66K74	1059 aa	Predicted RBP	14	□□□□□ -0.17
EIF3C-213	ENST00000569005	CCDC146	Q8IYE0	955 aa		14	□□□□□ -0.17
EIF3C-213	ENST00000569005	TRIM35	Q9UPQ4	493 aa		14	□□□□□ -0.17
EIF3C-213	ENST00000569005	ANKRD36C	Q5JPF3	1778 aa		14	□□□□□ -0.17
EIF3C-213	ENST00000569005	RNF123	Q5XPI4	1314 aa		13.99	□□□□□ -0.17
EIF3C-213	ENST00000569005	IQCA1L	A6NCM1	817 aa		13.99	□□□□□ -0.17
EIF3C-213	ENST00000569005	CHL1	O00533	1208 aa		13.99	□□□□□ -0.17
EIF3C-213	ENST00000569005	EIF2S2	P20042	333 aa	Known RBP	13.99	□□□□□ -0.17
EIF3C-213	ENST00000569005	FMR1	Q06787	632 aa	Known RBP eCLIP	13.99	□□□□□ -0.17
EIF3C-213	ENST00000569005	LMOD3	Q0VAK6	560 aa		13.99	□□□□□ -0.17
EIF3C-213	ENST00000569005	SLC10A5	Q5PT55	438 aa		13.99	□□□□□ -0.17
EIF3C-213	ENST00000569005	CRAMP1	Q96RY5	1269 aa		13.99	□□□□□ -0.17
EIF3C-213	ENST00000569005	HACL1	Q9UJ83	578 aa		13.99	□□□□□ -0.17
EIF3C-213	ENST00000569005	LAMB2	P55268	1798 aa		13.99	□□□□□ -0.17
EIF3C-213	ENST00000569005	LTBP1	Q14766	1721 aa		13.98	□□□□□ -0.17
EIF3C-213	ENST00000569005	CNTNAP1	P78357	1384 aa		13.98	□□□□□ -0.17
EIF3C-213	ENST00000569005	EPHX2	P34913	555 aa		13.98	□□□□□ -0.17
EIF3C-213	ENST00000569005	PARP10	Q53GL7	1025 aa		13.98	□□□□□ -0.17
EIF3C-213	ENST00000569005	CC2D2B	Q6DHV5	1058 aa		13.98	□□□□□ -0.17
EIF3C-213	ENST00000569005	RPGR	Q92834	1020 aa	Known RBP	13.98	□□□□□ -0.17
EIF3C-213	ENST00000569005	TMEM88B	A6NKF7	163 aa		13.97	□□□□□ -0.17
EIF3C-213	ENST00000569005	COPS6	Q7L5N1	327 aa		13.97	□□□□□ -0.17
EIF3C-213	ENST00000569005	CNTROB	Q8N137	903 aa		13.97	□□□□□ -0.17
EIF3C-213	ENST00000569005	GPC2	Q8N158	579 aa		13.97	□□□□□ -0.17
EIF3C-213	ENST00000569005	GJA3	Q9Y6H8	435 aa		13.97	□□□□□ -0.17
EIF3C-213	ENST00000569005	PPEF1	O14829	653 aa	Predicted RBP	13.96	□□□□□ -0.17
EIF3C-213	ENST00000569005	PPP1R42	Q7Z4L9	355 aa		13.96	□□□□□ -0.17
EIF3C-213	ENST00000569005	NLRP10	Q86W26	655 aa		13.96	□□□□□ -0.17
EIF3C-213	ENST00000569005	XAGE3	Q8WTP9	111 aa		13.96	□□□□□ -0.17
EIF3C-213	ENST00000569005	RUNDC1	Q96C34	613 aa		13.96	□□□□□ -0.17
EIF3C-213	ENST00000569005	RBM17	Q96I25	401 aa	Known RBP	13.96	□□□□□ -0.17
EIF3C-213	ENST00000569005	UTP14A	Q9BVJ6	771 aa	Known RBP	13.96	□□□□□ -0.17
EIF3C-213	ENST00000569005	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.96	□□□□□ -0.17
EIF3C-213	ENST00000569005	ADAMTS8	Q9UP79	889 aa		13.96	□□□□□ -0.17
EIF3C-213	ENST00000569005	ABCC4	O15439	1325 aa		13.95	□□□□□ -0.18
EIF3C-213	ENST00000569005	NEUROD2	Q15784	382 aa		13.95	□□□□□ -0.18
EIF3C-213	ENST00000569005	NECTIN2	Q92692	538 aa		13.95	□□□□□ -0.18
EIF3C-213	ENST00000569005	EPS15	P42566	896 aa		13.94	□□□□□ -0.18
EIF3C-213	ENST00000569005	TCIRG1	Q13488	830 aa		13.94	□□□□□ -0.18
EIF3C-213	ENST00000569005	GRIPAP1	Q4V328	841 aa		13.94	□□□□□ -0.18
EIF3C-213	ENST00000569005	ZNF428	Q96B54	188 aa		13.94	□□□□□ -0.18
EIF3C-213	ENST00000569005	NLRP3	Q96P20	1036 aa		13.94	□□□□□ -0.18
EIF3C-213	ENST00000569005	CHPF2	Q9P2E5	772 aa		13.94	□□□□□ -0.18
EIF3C-213	ENST00000569005	ATP6V0A2	Q9Y487	856 aa		13.94	□□□□□ -0.18
EIF3C-213	ENST00000569005	DDX60	Q8IY21	1712 aa	Known RBP	13.93	□□□□□ -0.18
EIF3C-213	ENST00000569005	HCLS1	P14317	486 aa	Predicted RBP	13.93	□□□□□ -0.18
EIF3C-213	ENST00000569005	SCNN1D	P51172	638 aa		13.93	□□□□□ -0.18
EIF3C-213	ENST00000569005	LBX1	P52954	281 aa		13.93	□□□□□ -0.18
EIF3C-213	ENST00000569005	AIMP1	Q12904	312 aa	Known RBP	13.93	□□□□□ -0.18
EIF3C-213	ENST00000569005	JDP2	Q8WYK2	163 aa		13.93	□□□□□ -0.18
EIF3C-213	ENST00000569005	PRKRIP1	Q9H875	184 aa	Predicted RBP	13.93	□□□□□ -0.18
EIF3C-213	ENST00000569005	WBP1L	Q9NX94	342 aa		13.93	□□□□□ -0.18
EIF3C-213	ENST00000569005	TAF1	P21675	1872 aa		13.93	□□□□□ -0.18
EIF3C-213	ENST00000569005	DUOX1	Q9NRD9	1551 aa		13.92	□□□□□ -0.18
EIF3C-213	ENST00000569005	HOXB7	P09629	217 aa		13.92	□□□□□ -0.18
EIF3C-213	ENST00000569005	ZNF853	P0CG23	659 aa		13.92	□□□□□ -0.18
EIF3C-213	ENST00000569005	WDR43	Q15061	677 aa	Known RBP eCLIP	13.92	□□□□□ -0.18
EIF3C-213	ENST00000569005	DEFB115	Q30KQ5	88 aa		13.92	□□□□□ -0.18
EIF3C-213	ENST00000569005	HSP90AB3P	Q58FF7	597 aa		13.92	□□□□□ -0.18
EIF3C-213	ENST00000569005	PNMA8A	Q86V59	439 aa	Predicted RBP	13.92	□□□□□ -0.18
EIF3C-213	ENST00000569005	LARGE2	Q8N3Y3	721 aa		13.92	□□□□□ -0.18
EIF3C-213	ENST00000569005	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.92	□□□□□ -0.18
EIF3C-213	ENST00000569005	LRRC37A	A6NMS7	1700 aa		13.92	□□□□□ -0.18
EIF3C-213	ENST00000569005	COL4A1	P02462	1669 aa		13.91	□□□□□ -0.18
EIF3C-213	ENST00000569005	SH3TC1	Q8TE82	1336 aa		13.91	□□□□□ -0.18
EIF3C-213	ENST00000569005	RASSF10	A6NK89	507 aa		13.91	□□□□□ -0.18
EIF3C-213	ENST00000569005	TRAF5	O00463	557 aa		13.91	□□□□□ -0.18
EIF3C-213	ENST00000569005	EIF6	P56537	245 aa	Known RBP	13.91	□□□□□ -0.18
EIF3C-213	ENST00000569005	HDGFL1	Q5TGJ6	251 aa		13.91	□□□□□ -0.18
EIF3C-213	ENST00000569005	CFAP44	Q96MT7	982 aa		13.91	□□□□□ -0.18
EIF3C-213	ENST00000569005	LAS1L	Q9Y4W2	734 aa	Known RBP	13.91	□□□□□ -0.18
EIF3C-213	ENST00000569005	CTCF	P49711	727 aa	Predicted RBP	13.9	□□□□□ -0.18
EIF3C-213	ENST00000569005	AOC3	Q16853	763 aa		13.9	□□□□□ -0.18
EIF3C-213	ENST00000569005	CST9	Q5W186	159 aa		13.9	□□□□□ -0.18
EIF3C-213	ENST00000569005	PLBD2	Q8NHP8	589 aa		13.9	□□□□□ -0.18
EIF3C-213	ENST00000569005	ISCA1	Q9BUE6	129 aa		13.9	□□□□□ -0.18
EIF3C-213	ENST00000569005	PRDM10	Q9NQV6	1147 aa		13.9	□□□□□ -0.18
EIF3C-213	ENST00000569005	MBIP	Q9NS73	344 aa		13.9	□□□□□ -0.18

Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms