RNA–Protein interactions for RNA: ENST00000568770.5

CDH13-211, Transcript of cadherin 13, humanhuman

TSL 4

Gene CDH13, Length 589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-211ENST00000568770 PARD3Q8TEW0 1356 aa8.36□□□□□ -1.07
CDH13-211ENST00000568770 SPATA31A1Q5TZJ5 1347 aa8.36□□□□□ -1.07
CDH13-211ENST00000568770 DLC1Q96QB1 1528 aa8.36□□□□□ -1.07
CDH13-211ENST00000568770 ZNF697Q5TEC3 545 aa8.36□□□□□ -1.07
CDH13-211ENST00000568770 ZNF598Q86UK7 904 aaKnown RBP8.36□□□□□ -1.07
CDH13-211ENST00000568770 GLMNQ92990 594 aa8.36□□□□□ -1.07
CDH13-211ENST00000568770 C1QTNF2Q9BXJ5 285 aa8.36□□□□□ -1.07
CDH13-211ENST00000568770 C14orf93Q9H972 538 aaKnown RBP8.36□□□□□ -1.07
CDH13-211ENST00000568770 PKD2L1Q9P0L9 805 aa8.36□□□□□ -1.07
CDH13-211ENST00000568770 V9GY48 417 aaPredicted RBP8.36□□□□□ -1.07
CDH13-211ENST00000568770 CHD4Q14839 1912 aa8.36□□□□□ -1.07
CDH13-211ENST00000568770 GPRASP1Q5JY77 1395 aa8.35□□□□□ -1.07
CDH13-211ENST00000568770 SIAH2O43255 324 aa8.35□□□□□ -1.07
CDH13-211ENST00000568770 CFAP70Q5T0N1 1121 aa8.35□□□□□ -1.07
CDH13-211ENST00000568770 MRGPRX2Q96LB1 330 aa8.35□□□□□ -1.07
CDH13-211ENST00000568770 PRDM11Q9NQV5 511 aa8.35□□□□□ -1.07
CDH13-211ENST00000568770 POGKQ9P215 609 aa8.35□□□□□ -1.07
CDH13-211ENST00000568770 PCDHB9Q9Y5E1 797 aa8.35□□□□□ -1.07
CDH13-211ENST00000568770 ACIN1Q9UKV3 1341 aaKnown RBP8.34□□□□□ -1.07
CDH13-211ENST00000568770 FOXC1Q12948 553 aa8.34□□□□□ -1.07
CDH13-211ENST00000568770 NBPF8Q3BBV2 869 aa8.34□□□□□ -1.07
CDH13-211ENST00000568770 EHBP1Q8NDI1 1231 aa8.34□□□□□ -1.07
CDH13-211ENST00000568770 HIRIP3Q9BW71 556 aaPredicted RBP8.34□□□□□ -1.07
CDH13-211ENST00000568770 STRN4Q9NRL3 753 aa8.34□□□□□ -1.07
CDH13-211ENST00000568770 USP35Q9P2H5 1018 aa8.34□□□□□ -1.07
CDH13-211ENST00000568770 PPP1R1BQ9UD71 204 aaPredicted RBP8.34□□□□□ -1.07
CDH13-211ENST00000568770 RGPD3A6NKT7 1758 aaPredicted RBP8.34□□□□□ -1.07
CDH13-211ENST00000568770 RGPD4Q7Z3J3 1758 aa8.34□□□□□ -1.07
CDH13-211ENST00000568770 PARP4Q9UKK3 1724 aaKnown RBP8.34□□□□□ -1.07
CDH13-211ENST00000568770 KIAA0232Q92628 1395 aa8.34□□□□□ -1.07
CDH13-211ENST00000568770 TULP4Q9NRJ4 1543 aa8.34□□□□□ -1.08
CDH13-211ENST00000568770 PRR36Q9H6K5 1346 aa8.33□□□□□ -1.08
CDH13-211ENST00000568770 CASZ1Q86V15 1759 aa8.33□□□□□ -1.08
CDH13-211ENST00000568770 WNT7AO00755 349 aa8.33□□□□□ -1.08
CDH13-211ENST00000568770 VARSP26640 1264 aaKnown RBP8.33□□□□□ -1.08
CDH13-211ENST00000568770 EIF4G2P78344 907 aaKnown RBP eCLIP8.33□□□□□ -1.08
CDH13-211ENST00000568770 CHRNA2Q15822 529 aa8.33□□□□□ -1.08
CDH13-211ENST00000568770 TRIM67Q6ZTA4 783 aa8.33□□□□□ -1.08
CDH13-211ENST00000568770 SPON1Q9HCB6 807 aa8.33□□□□□ -1.08
CDH13-211ENST00000568770 NINLQ9Y2I6 1382 aa8.33□□□□□ -1.08
CDH13-211ENST00000568770 ADGRB1O14514 1584 aa8.32□□□□□ -1.08
CDH13-211ENST00000568770 KCNQ2O43526 872 aa8.32□□□□□ -1.08
CDH13-211ENST00000568770 GDF9O60383 454 aa8.32□□□□□ -1.08
CDH13-211ENST00000568770 SEMA3FQ13275 785 aa8.32□□□□□ -1.08
CDH13-211ENST00000568770 PDE3BQ13370 1112 aa8.32□□□□□ -1.08
CDH13-211ENST00000568770 NGDNQ8NEJ9 315 aaKnown RBP8.32□□□□□ -1.08
CDH13-211ENST00000568770 CALR3Q96L12 384 aaKnown RBP8.32□□□□□ -1.08
CDH13-211ENST00000568770 MPHOSPH9Q99550 1183 aa8.32□□□□□ -1.08
CDH13-211ENST00000568770 CEP126Q9P2H0 1117 aa8.32□□□□□ -1.08
CDH13-211ENST00000568770 TLL2Q9Y6L7 1015 aa8.32□□□□□ -1.08
CDH13-211ENST00000568770 MYOM1P52179 1685 aa8.32□□□□□ -1.08
CDH13-211ENST00000568770 LMO7Q8WWI1 1683 aa8.32□□□□□ -1.08
CDH13-211ENST00000568770 GOLGB1Q14789 3259 aaKnown RBP8.32□□□□□ -1.08
CDH13-211ENST00000568770 ARHGEF28Q8N1W1 1705 aaKnown RBP8.32□□□□□ -1.08
CDH13-211ENST00000568770 PEAK1Q9H792 1746 aa8.32□□□□□ -1.08
CDH13-211ENST00000568770 CEP350Q5VT06 3117 aa8.32□□□□□ -1.08
CDH13-211ENST00000568770 NRKQ7Z2Y5 1582 aa8.31□□□□□ -1.08
CDH13-211ENST00000568770 AKAP12Q02952 1782 aa8.31□□□□□ -1.08
CDH13-211ENST00000568770 PIK3CDO00329 1044 aa8.31□□□□□ -1.08
CDH13-211ENST00000568770 GIGYF1O75420 1035 aaPredicted RBP8.31□□□□□ -1.08
CDH13-211ENST00000568770 ZC3H6P61129 1189 aaKnown RBP8.31□□□□□ -1.08
CDH13-211ENST00000568770 TSGA10IPQ3SY00 556 aa8.31□□□□□ -1.08
CDH13-211ENST00000568770 DZIP3Q86Y13 1208 aaKnown RBP8.31□□□□□ -1.08
CDH13-211ENST00000568770 TRMT44Q8IYL2 757 aaKnown RBP8.31□□□□□ -1.08
CDH13-211ENST00000568770 UCN2Q96RP3 112 aa8.31□□□□□ -1.08
CDH13-211ENST00000568770 TRAK1Q9UPV9 953 aa8.31□□□□□ -1.08
CDH13-211ENST00000568770 EIF3AQ14152 1382 aaKnown RBP8.31□□□□□ -1.08
CDH13-211ENST00000568770 WNK3Q9BYP7 1800 aa8.31□□□□□ -1.08
CDH13-211ENST00000568770 TOPAZ1Q8N9V7 1692 aa8.3□□□□□ -1.08
CDH13-211ENST00000568770 SSH2Q76I76 1423 aa8.3□□□□□ -1.08
CDH13-211ENST00000568770 TNFRSF10AO00220 468 aa8.3□□□□□ -1.08
CDH13-211ENST00000568770 WASLO00401 505 aaPredicted RBP8.3□□□□□ -1.08
CDH13-211ENST00000568770 GRM5P41594 1212 aa8.3□□□□□ -1.08
CDH13-211ENST00000568770 EVA1CP58658 441 aa8.3□□□□□ -1.08
CDH13-211ENST00000568770 PHTF2Q8N3S3 785 aa8.3□□□□□ -1.08
CDH13-211ENST00000568770 FAM174AQ8TBP5 190 aa8.3□□□□□ -1.08
CDH13-211ENST00000568770 SOX11P35716 441 aa8.29□□□□□ -1.08
CDH13-211ENST00000568770 ARID5BQ14865 1188 aa8.29□□□□□ -1.08
CDH13-211ENST00000568770 NUTM2GQ5VZR2 741 aa8.29□□□□□ -1.08
CDH13-211ENST00000568770 LARP1Q6PKG0 1096 aaKnown RBP8.29□□□□□ -1.08
CDH13-211ENST00000568770 CCDC82Q8N4S0 544 aa8.29□□□□□ -1.08
CDH13-211ENST00000568770 ATP7BP35670 1465 aa8.29□□□□□ -1.08
CDH13-211ENST00000568770 LRRC37A3O60309 1634 aa8.29□□□□□ -1.08
CDH13-211ENST00000568770 RGPD5Q99666 1765 aa8.28□□□□□ -1.08
CDH13-211ENST00000568770 TCP11L2Q8N4U5 519 aa8.28□□□□□ -1.08
CDH13-211ENST00000568770 ZNF784Q8NCA9 323 aaPredicted RBP8.28□□□□□ -1.08
CDH13-211ENST00000568770 SLC10A4Q96EP9 437 aa8.28□□□□□ -1.08
CDH13-211ENST00000568770 CDK15Q96Q40 435 aa8.28□□□□□ -1.08
CDH13-211ENST00000568770 TBC1D9Q6ZT07 1266 aa8.27□□□□□ -1.09
CDH13-211ENST00000568770 VASH1Q7L8A9 365 aaPredicted RBP8.27□□□□□ -1.09
CDH13-211ENST00000568770 KCTD15Q96SI1 283 aaPredicted RBP8.27□□□□□ -1.09
CDH13-211ENST00000568770 ARID3AQ99856 593 aa8.27□□□□□ -1.09
CDH13-211ENST00000568770 PDGFDQ9GZP0 370 aaPredicted RBP8.27□□□□□ -1.09
CDH13-211ENST00000568770 ESPNB1AK53 854 aa8.26□□□□□ -1.09
CDH13-211ENST00000568770 J3QL48 77 aa8.26□□□□□ -1.09
CDH13-211ENST00000568770 NUDT16Q96DE0 195 aaKnown RBP8.26□□□□□ -1.09
CDH13-211ENST00000568770 TFIP11Q9UBB9 837 aaKnown RBP8.26□□□□□ -1.09
CDH13-211ENST00000568770 THRAP3Q9Y2W1 955 aaKnown RBP8.26□□□□□ -1.09
CDH13-211ENST00000568770 OVOS2A0A0G2JMS6 1433 aa8.26□□□□□ -1.09
CDH13-211ENST00000568770 OVOS2A0A0J9YW53 1432 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms