RNA–Protein interactions for RNA: ENST00000568328.5

VWA3A-208, Transcript of von Willebrand factor A domain containing 3A, humanhuman

TSL 1 (best)

Gene VWA3A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VWA3A-208ENST00000568328 CCDC88AQ3V6T2 1871 aa13.06□□□□□ -0.32
VWA3A-208ENST00000568328 MAP3K15Q6ZN16 1313 aa13.06□□□□□ -0.32
VWA3A-208ENST00000568328 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
VWA3A-208ENST00000568328 L3MBTL3Q96JM7 780 aaPredicted RBP13.05□□□□□ -0.32
VWA3A-208ENST00000568328 SCN4AP35499 1836 aa13.05□□□□□ -0.32
VWA3A-208ENST00000568328 PARP10Q53GL7 1025 aa13.05□□□□□ -0.32
VWA3A-208ENST00000568328 PLEKHF1Q96S99 279 aa13.05□□□□□ -0.32
VWA3A-208ENST00000568328 EIF4A1P60842 406 aaKnown RBP13.04□□□□□ -0.32
VWA3A-208ENST00000568328 C7orf43Q8WVR3 580 aa13.04□□□□□ -0.32
VWA3A-208ENST00000568328 TMX4Q9H1E5 349 aaPredicted RBP13.04□□□□□ -0.32
VWA3A-208ENST00000568328 VPS33BQ9H267 617 aa13.04□□□□□ -0.32
VWA3A-208ENST00000568328 NBPF26B4DH59 902 aa13.04□□□□□ -0.32
VWA3A-208ENST00000568328 PRELPP51888 382 aa13.04□□□□□ -0.32
VWA3A-208ENST00000568328 NBPF10Q6P3W6 841 aaKnown RBP13.04□□□□□ -0.32
VWA3A-208ENST00000568328 PPP1R42Q7Z4L9 355 aa13.04□□□□□ -0.32
VWA3A-208ENST00000568328 LDHDQ86WU2 507 aa13.04□□□□□ -0.32
VWA3A-208ENST00000568328 NBPF15Q8N660 670 aa13.04□□□□□ -0.32
VWA3A-208ENST00000568328 RBM17Q96I25 401 aaKnown RBP13.04□□□□□ -0.32
VWA3A-208ENST00000568328 DLG5Q8TDM6 1919 aa13.03□□□□□ -0.32
VWA3A-208ENST00000568328 SLX4Q8IY92 1834 aa13.03□□□□□ -0.32
VWA3A-208ENST00000568328 HSP90AB3PQ58FF7 597 aa13.03□□□□□ -0.32
VWA3A-208ENST00000568328 PSMD1Q99460 953 aa13.03□□□□□ -0.32
VWA3A-208ENST00000568328 DCTN1Q14203 1278 aa13.02□□□□□ -0.33
VWA3A-208ENST00000568328 RPGRQ92834 1020 aaKnown RBP13.02□□□□□ -0.33
VWA3A-208ENST00000568328 CRAMP1Q96RY5 1269 aa13.02□□□□□ -0.33
VWA3A-208ENST00000568328 CREBZFQ9NS37 354 aa13.02□□□□□ -0.33
VWA3A-208ENST00000568328 ZNF219Q9P2Y4 722 aaPredicted RBP13.02□□□□□ -0.33
VWA3A-208ENST00000568328 HOXA10P31260 410 aaPredicted RBP13.01□□□□□ -0.33
VWA3A-208ENST00000568328 CRY2Q49AN0 593 aa13.01□□□□□ -0.33
VWA3A-208ENST00000568328 CACNA1SQ13698 1873 aa13.01□□□□□ -0.33
VWA3A-208ENST00000568328 IARSP41252 1262 aaKnown RBP13.01□□□□□ -0.33
VWA3A-208ENST00000568328 PNMA8AQ86V59 439 aaPredicted RBP13.01□□□□□ -0.33
VWA3A-208ENST00000568328 SUPT20HQ8NEM7 779 aa13.01□□□□□ -0.33
VWA3A-208ENST00000568328 L1TD1Q5T7N2 865 aaKnown RBP13□□□□□ -0.33
VWA3A-208ENST00000568328 TSPYL4Q9UJ04 414 aa13□□□□□ -0.33
VWA3A-208ENST00000568328 HACL1Q9UJ83 578 aa13□□□□□ -0.33
VWA3A-208ENST00000568328 PRAMEF22A3QJZ6 481 aa13□□□□□ -0.33
VWA3A-208ENST00000568328 EIF6P56537 245 aaKnown RBP13□□□□□ -0.33
VWA3A-208ENST00000568328 SYNE4Q8N205 404 aa13□□□□□ -0.33
VWA3A-208ENST00000568328 CCDC24Q8N4L8 307 aa13□□□□□ -0.33
VWA3A-208ENST00000568328 JDP2Q8WYK2 163 aa13□□□□□ -0.33
VWA3A-208ENST00000568328 NUP98P52948 1817 aa12.99□□□□□ -0.33
VWA3A-208ENST00000568328 POTECB2RU33 542 aa12.99□□□□□ -0.33
VWA3A-208ENST00000568328 GIGYF2Q6Y7W6 1299 aaKnown RBP12.99□□□□□ -0.33
VWA3A-208ENST00000568328 ZNF34Q8IZ26 560 aa12.99□□□□□ -0.33
VWA3A-208ENST00000568328 PKNOX2Q96KN3 472 aa12.99□□□□□ -0.33
VWA3A-208ENST00000568328 HLFQ16534 295 aa12.99□□□□□ -0.33
VWA3A-208ENST00000568328 FAM161AQ3B820 660 aa12.99□□□□□ -0.33
VWA3A-208ENST00000568328 CENPQQ7L2Z9 268 aaPredicted RBP12.99□□□□□ -0.33
VWA3A-208ENST00000568328 TMC4Q7Z404 712 aa12.99□□□□□ -0.33
VWA3A-208ENST00000568328 CHMP4AQ9BY43 222 aa12.99□□□□□ -0.33
VWA3A-208ENST00000568328 GPC2Q8N158 579 aa12.98□□□□□ -0.33
VWA3A-208ENST00000568328 TAF1DQ9H5J8 278 aaPredicted RBP12.98□□□□□ -0.33
VWA3A-208ENST00000568328 RRP7AQ9Y3A4 280 aaKnown RBP12.98□□□□□ -0.33
VWA3A-208ENST00000568328 FZD9O00144 591 aa12.97□□□□□ -0.33
VWA3A-208ENST00000568328 HOXB7P09629 217 aa12.97□□□□□ -0.33
VWA3A-208ENST00000568328 PIP4K2AP48426 406 aaPredicted RBP12.97□□□□□ -0.33
VWA3A-208ENST00000568328 SLC10A5Q5PT55 438 aa12.97□□□□□ -0.33
VWA3A-208ENST00000568328 UTP14AQ9BVJ6 771 aaKnown RBP12.97□□□□□ -0.33
VWA3A-208ENST00000568328 DDNO94850 711 aaPredicted RBP12.97□□□□□ -0.33
VWA3A-208ENST00000568328 LMOD1P29536 600 aaPredicted RBP12.97□□□□□ -0.33
VWA3A-208ENST00000568328 RIPK4P57078 832 aa12.97□□□□□ -0.33
VWA3A-208ENST00000568328 NLRP3Q96P20 1036 aa12.97□□□□□ -0.33
VWA3A-208ENST00000568328 PPEF1O14829 653 aaPredicted RBP12.96□□□□□ -0.33
VWA3A-208ENST00000568328 MIS18AQ9NYP9 233 aa12.96□□□□□ -0.33
VWA3A-208ENST00000568328 NTSR2O95665 410 aa12.95□□□□□ -0.34
VWA3A-208ENST00000568328 HSP90B1P14625 803 aaKnown RBP12.95□□□□□ -0.34
VWA3A-208ENST00000568328 MYL6BP14649 208 aa12.95□□□□□ -0.34
VWA3A-208ENST00000568328 EPHX2P34913 555 aa12.95□□□□□ -0.34
VWA3A-208ENST00000568328 TMPOP42166 694 aaKnown RBP12.95□□□□□ -0.34
VWA3A-208ENST00000568328 CALD1Q05682 793 aaKnown RBP12.95□□□□□ -0.34
VWA3A-208ENST00000568328 WDR43Q15061 677 aaKnown RBP eCLIP12.95□□□□□ -0.34
VWA3A-208ENST00000568328 ZNF277Q9NRM2 450 aaPredicted RBP12.95□□□□□ -0.34
VWA3A-208ENST00000568328 ANKRD36CQ5JPF3 1778 aa12.95□□□□□ -0.34
VWA3A-208ENST00000568328 ABCC12Q96J65 1359 aa12.95□□□□□ -0.34
VWA3A-208ENST00000568328 FAM177BA6PVY3 158 aa12.95□□□□□ -0.34
VWA3A-208ENST00000568328 BBOX1O75936 387 aa12.95□□□□□ -0.34
VWA3A-208ENST00000568328 TTLL7Q6ZT98 887 aa12.95□□□□□ -0.34
VWA3A-208ENST00000568328 NGEFQ8N5V2 710 aa12.95□□□□□ -0.34
VWA3A-208ENST00000568328 RUNDC1Q96C34 613 aa12.95□□□□□ -0.34
VWA3A-208ENST00000568328 PASKQ96RG2 1323 aa12.94□□□□□ -0.34
VWA3A-208ENST00000568328 SNED1Q8TER0 1413 aa12.94□□□□□ -0.34
VWA3A-208ENST00000568328 TMEM88BA6NKF7 163 aa12.94□□□□□ -0.34
VWA3A-208ENST00000568328 SUSD4Q5VX71 490 aa12.94□□□□□ -0.34
VWA3A-208ENST00000568328 NIM1KQ8IY84 436 aa12.94□□□□□ -0.34
VWA3A-208ENST00000568328 CNTNAP1P78357 1384 aa12.94□□□□□ -0.34
VWA3A-208ENST00000568328 ADAMTSL1Q8N6G6 1762 aa12.94□□□□□ -0.34
VWA3A-208ENST00000568328 AIDAQ96BJ3 306 aa12.94□□□□□ -0.34
VWA3A-208ENST00000568328 ZBTB3Q9H5J0 574 aa12.94□□□□□ -0.34
VWA3A-208ENST00000568328 CDHR2Q9BYE9 1310 aa12.93□□□□□ -0.34
VWA3A-208ENST00000568328 HSPA1AP0DMV8 641 aaKnown RBP12.93□□□□□ -0.34
VWA3A-208ENST00000568328 HSPA1BP0DMV9 641 aaKnown RBP12.93□□□□□ -0.34
VWA3A-208ENST00000568328 DDX21Q9NR30 783 aaKnown RBP eCLIP12.93□□□□□ -0.34
VWA3A-208ENST00000568328 CLEC11AQ9Y240 323 aa12.93□□□□□ -0.34
VWA3A-208ENST00000568328 ZNF541Q9H0D2 1346 aa12.93□□□□□ -0.34
VWA3A-208ENST00000568328 USP50Q70EL3 339 aaPredicted RBP12.93□□□□□ -0.34
VWA3A-208ENST00000568328 LARGE2Q8N3Y3 721 aa12.93□□□□□ -0.34
VWA3A-208ENST00000568328 ATP6V0A2Q9Y487 856 aa12.93□□□□□ -0.34
VWA3A-208ENST00000568328 UBN2Q6ZU65 1347 aa12.92□□□□□ -0.34
VWA3A-208ENST00000568328 GPTP24298 496 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms