RNA–Protein interactions for RNA: ENST00000567406.5

CDR2-206, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-206ENST00000567406 RPGRQ92834 1020 aaKnown RBP20.05■□□□□ 0.8
CDR2-206ENST00000567406 IARSP41252 1262 aaKnown RBP20.04■□□□□ 0.8
CDR2-206ENST00000567406 ERBB4Q15303 1308 aa20.03■□□□□ 0.8
CDR2-206ENST00000567406 LMOD3Q0VAK6 560 aa20.03■□□□□ 0.8
CDR2-206ENST00000567406 CHADLQ6NUI6 762 aa20.03■□□□□ 0.8
CDR2-206ENST00000567406 COPS6Q7L5N1 327 aa20.03■□□□□ 0.8
CDR2-206ENST00000567406 ADAMTS8Q9UP79 889 aa20.03■□□□□ 0.8
CDR2-206ENST00000567406 TRIM35Q9UPQ4 493 aa20.03■□□□□ 0.8
CDR2-206ENST00000567406 WDR43Q15061 677 aaKnown RBP eCLIP20.02■□□□□ 0.8
CDR2-206ENST00000567406 PPP1R42Q7Z4L9 355 aa20.02■□□□□ 0.8
CDR2-206ENST00000567406 XAGE3Q8WTP9 111 aa20.02■□□□□ 0.8
CDR2-206ENST00000567406 TAF1DQ9H5J8 278 aaPredicted RBP20.02■□□□□ 0.8
CDR2-206ENST00000567406 HOXA10P31260 410 aaPredicted RBP20.01■□□□□ 0.79
CDR2-206ENST00000567406 EAPPQ56P03 285 aaPredicted RBP20.01■□□□□ 0.79
CDR2-206ENST00000567406 RUNDC1Q96C34 613 aa20.01■□□□□ 0.79
CDR2-206ENST00000567406 RBM17Q96I25 401 aaKnown RBP20.01■□□□□ 0.79
CDR2-206ENST00000567406 BABAM1Q9NWV8 329 aa20.01■□□□□ 0.79
CDR2-206ENST00000567406 SNED1Q8TER0 1413 aa20.01■□□□□ 0.79
CDR2-206ENST00000567406 FZD9O00144 591 aa20■□□□□ 0.79
CDR2-206ENST00000567406 CHL1O00533 1208 aa20■□□□□ 0.79
CDR2-206ENST00000567406 L3MBTL3Q96JM7 780 aaPredicted RBP20■□□□□ 0.79
CDR2-206ENST00000567406 UTP14AQ9BVJ6 771 aaKnown RBP20■□□□□ 0.79
CDR2-206ENST00000567406 COL4A5P29400 1685 aa20■□□□□ 0.79
CDR2-206ENST00000567406 IBTKQ9P2D0 1353 aaPredicted RBP19.99■□□□□ 0.79
CDR2-206ENST00000567406 IQCA1LA6NCM1 817 aa19.99■□□□□ 0.79
CDR2-206ENST00000567406 PPEF1O14829 653 aaPredicted RBP19.99■□□□□ 0.79
CDR2-206ENST00000567406 PARP10Q53GL7 1025 aa19.99■□□□□ 0.79
CDR2-206ENST00000567406 PSMD1Q99460 953 aa19.99■□□□□ 0.79
CDR2-206ENST00000567406 RNF123Q5XPI4 1314 aa19.99■□□□□ 0.79
CDR2-206ENST00000567406 HCLS1P14317 486 aaPredicted RBP19.98■□□□□ 0.79
CDR2-206ENST00000567406 COL13A1Q5TAT6 717 aaPredicted RBP19.98■□□□□ 0.79
CDR2-206ENST00000567406 NLRP3Q96P20 1036 aa19.98■□□□□ 0.79
CDR2-206ENST00000567406 CRAMP1Q96RY5 1269 aa19.98■□□□□ 0.79
CDR2-206ENST00000567406 MKRN1Q9UHC7 482 aaKnown RBP19.98■□□□□ 0.79
CDR2-206ENST00000567406 GJA3Q9Y6H8 435 aa19.98■□□□□ 0.79
CDR2-206ENST00000567406 LDHDQ86WU2 507 aa19.97■□□□□ 0.79
CDR2-206ENST00000567406 CHPF2Q9P2E5 772 aa19.97■□□□□ 0.79
CDR2-206ENST00000567406 HACL1Q9UJ83 578 aa19.97■□□□□ 0.79
CDR2-206ENST00000567406 CLEC11AQ9Y240 323 aa19.97■□□□□ 0.79
CDR2-206ENST00000567406 RIC1Q4ADV7 1423 aa19.96■□□□□ 0.79
CDR2-206ENST00000567406 EPHX2P34913 555 aa19.96■□□□□ 0.79
CDR2-206ENST00000567406 SLC10A5Q5PT55 438 aa19.96■□□□□ 0.79
CDR2-206ENST00000567406 NLRP10Q86W26 655 aa19.96■□□□□ 0.79
CDR2-206ENST00000567406 JDP2Q8WYK2 163 aa19.96■□□□□ 0.79
CDR2-206ENST00000567406 DDX21Q9NR30 783 aaKnown RBP eCLIP19.96■□□□□ 0.79
CDR2-206ENST00000567406 SCN4AP35499 1836 aa19.95■□□□□ 0.78
CDR2-206ENST00000567406 TCIRG1Q13488 830 aa19.95■□□□□ 0.78
CDR2-206ENST00000567406 CC2D2BQ6DHV5 1058 aa19.95■□□□□ 0.78
CDR2-206ENST00000567406 LARGE2Q8N3Y3 721 aa19.95■□□□□ 0.78
CDR2-206ENST00000567406 ABCC4O15439 1325 aa19.95■□□□□ 0.78
CDR2-206ENST00000567406 HSPA1AP0DMV8 641 aaKnown RBP19.94■□□□□ 0.78
CDR2-206ENST00000567406 HSPA1BP0DMV9 641 aaKnown RBP19.94■□□□□ 0.78
CDR2-206ENST00000567406 HDGFL1Q5TGJ6 251 aa19.94■□□□□ 0.78
CDR2-206ENST00000567406 PRKRIP1Q9H875 184 aaPredicted RBP19.94■□□□□ 0.78
CDR2-206ENST00000567406 CREBZFQ9NS37 354 aa19.94■□□□□ 0.78
CDR2-206ENST00000567406 TRMT112Q9UI30 125 aaKnown RBP19.94■□□□□ 0.78
CDR2-206ENST00000567406 EIF6P56537 245 aaKnown RBP19.93■□□□□ 0.78
CDR2-206ENST00000567406 AOC3Q16853 763 aa19.93■□□□□ 0.78
CDR2-206ENST00000567406 MAP1SQ66K74 1059 aaPredicted RBP19.93■□□□□ 0.78
CDR2-206ENST00000567406 GPC2Q8N158 579 aa19.93■□□□□ 0.78
CDR2-206ENST00000567406 PASKQ96RG2 1323 aa19.93■□□□□ 0.78
CDR2-206ENST00000567406 ITGBL1O95965 494 aaPredicted RBP19.92■□□□□ 0.78
CDR2-206ENST00000567406 HSP90AB3PQ58FF7 597 aa19.92■□□□□ 0.78
CDR2-206ENST00000567406 MBIPQ9NS73 344 aa19.92■□□□□ 0.78
CDR2-206ENST00000567406 ATP6V0A2Q9Y487 856 aa19.92■□□□□ 0.78
CDR2-206ENST00000567406 TAF1P21675 1872 aa19.91■□□□□ 0.78
CDR2-206ENST00000567406 ATP5J2-PTCD1G3V325 749 aa19.91■□□□□ 0.78
CDR2-206ENST00000567406 APAF1O14727 1248 aa19.91■□□□□ 0.78
CDR2-206ENST00000567406 PPIP5K2O43314 1243 aa19.91■□□□□ 0.78
CDR2-206ENST00000567406 EPS15P42566 896 aa19.91■□□□□ 0.78
CDR2-206ENST00000567406 DUSP27Q5VZP5 1158 aa19.91■□□□□ 0.78
CDR2-206ENST00000567406 LAMB2P55268 1798 aa19.9■□□□□ 0.78
CDR2-206ENST00000567406 ANKRD36CQ5JPF3 1778 aa19.9■□□□□ 0.78
CDR2-206ENST00000567406 RTL5Q5HYW3 569 aaPredicted RBP19.9■□□□□ 0.78
CDR2-206ENST00000567406 NIM1KQ8IY84 436 aa19.9■□□□□ 0.78
CDR2-206ENST00000567406 CFAP44Q96MT7 982 aa19.9■□□□□ 0.78
CDR2-206ENST00000567406 LTBP1Q14766 1721 aa19.9■□□□□ 0.78
CDR2-206ENST00000567406 ELL2O00472 640 aaPredicted RBP19.89■□□□□ 0.77
CDR2-206ENST00000567406 FMR1Q06787 632 aaKnown RBP eCLIP19.89■□□□□ 0.775e-8■□□□□ 10.1
CDR2-206ENST00000567406 ANKRD13DQ6ZTN6 518 aa19.89■□□□□ 0.77
CDR2-206ENST00000567406 CNTROBQ8N137 903 aa19.89■□□□□ 0.77
CDR2-206ENST00000567406 PLBD2Q8NHP8 589 aa19.89■□□□□ 0.77
CDR2-206ENST00000567406 SH3TC1Q8TE82 1336 aa19.89■□□□□ 0.77
CDR2-206ENST00000567406 FAM89AQ96GI7 184 aa19.89■□□□□ 0.77
CDR2-206ENST00000567406 TMX4Q9H1E5 349 aaPredicted RBP19.89■□□□□ 0.77
CDR2-206ENST00000567406 SCNN1DP51172 638 aa19.88■□□□□ 0.77
CDR2-206ENST00000567406 GRIPAP1Q4V328 841 aa19.88■□□□□ 0.77
CDR2-206ENST00000567406 DDX46Q7L014 1031 aaKnown RBP19.88■□□□□ 0.77
CDR2-206ENST00000567406 PNMA8AQ86V59 439 aaPredicted RBP19.88■□□□□ 0.77
CDR2-206ENST00000567406 DBF4Q9UBU7 674 aaPredicted RBP19.88■□□□□ 0.77
CDR2-206ENST00000567406 ADAMTSL1Q8N6G6 1762 aa19.88■□□□□ 0.77
CDR2-206ENST00000567406 TMEM88BA6NKF7 163 aa19.87■□□□□ 0.77
CDR2-206ENST00000567406 BBOX1O75936 387 aa19.87■□□□□ 0.77
CDR2-206ENST00000567406 LMOD1P29536 600 aaPredicted RBP19.87■□□□□ 0.77
CDR2-206ENST00000567406 DPP8Q6V1X1 898 aaPredicted RBP19.87■□□□□ 0.77
CDR2-206ENST00000567406 SP8Q8IXZ3 490 aa19.87■□□□□ 0.77
CDR2-206ENST00000567406 HOXB7P09629 217 aa19.86■□□□□ 0.77
CDR2-206ENST00000567406 ZNF853P0CG23 659 aa19.86■□□□□ 0.77
CDR2-206ENST00000567406 GRAPQ13588 217 aa19.86■□□□□ 0.77
CDR2-206ENST00000567406 MPNDQ8N594 471 aa19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms