RNA–Protein interactions for RNA: ENST00000566254.1

CFDP1-206, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-206ENST00000566254 FHDC1Q9C0D6 1143 aaPredicted RBP12.67□□□□□ -0.38
CFDP1-206ENST00000566254 SLC6A16Q9GZN6 736 aa12.67□□□□□ -0.38
CFDP1-206ENST00000566254 THRAP3Q9Y2W1 955 aaKnown RBP12.67□□□□□ -0.38
CFDP1-206ENST00000566254 OVOS2A0A0G2JMS6 1433 aa12.67□□□□□ -0.38
CFDP1-206ENST00000566254 OVOS2A0A0J9YW53 1432 aa12.67□□□□□ -0.38
CFDP1-206ENST00000566254 OVOS2Q6IE36 1432 aa12.67□□□□□ -0.38
CFDP1-206ENST00000566254 UTRNP46939 3433 aa12.67□□□□□ -0.38
CFDP1-206ENST00000566254 LMO7Q8WWI1 1683 aa12.67□□□□□ -0.38
CFDP1-206ENST00000566254 GPKOWQ92917 476 aaPredicted RBP eCLIP12.66□□□□□ -0.38
CFDP1-206ENST00000566254 NUDT16Q96DE0 195 aaKnown RBP12.66□□□□□ -0.38
CFDP1-206ENST00000566254 SYT17Q9BSW7 474 aa12.66□□□□□ -0.38
CFDP1-206ENST00000566254 PEAK1Q9H792 1746 aa12.65□□□□□ -0.38
CFDP1-206ENST00000566254 PARP4Q9UKK3 1724 aaKnown RBP12.65□□□□□ -0.38
CFDP1-206ENST00000566254 PDXDC2PQ6P474 469 aa12.65□□□□□ -0.38
CFDP1-206ENST00000566254 CPDO75976 1380 aa12.65□□□□□ -0.38
CFDP1-206ENST00000566254 COL5A2P05997 1499 aaPredicted RBP12.65□□□□□ -0.38
CFDP1-206ENST00000566254 RGPD3A6NKT7 1758 aaPredicted RBP12.64□□□□□ -0.39
CFDP1-206ENST00000566254 RGPD4Q7Z3J3 1758 aa12.64□□□□□ -0.39
CFDP1-206ENST00000566254 PALM3A6NDB9 673 aaPredicted RBP12.64□□□□□ -0.39
CFDP1-206ENST00000566254 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
CFDP1-206ENST00000566254 ABTB2Q8N961 1025 aa12.64□□□□□ -0.39
CFDP1-206ENST00000566254 GPSM3Q9Y4H4 160 aa12.64□□□□□ -0.39
CFDP1-206ENST00000566254 ACEP12821 1306 aa12.63□□□□□ -0.39
CFDP1-206ENST00000566254 ITSN1Q15811 1721 aa12.63□□□□□ -0.39
CFDP1-206ENST00000566254 PTCRAQ6ISU1 281 aaPredicted RBP12.63□□□□□ -0.39
CFDP1-206ENST00000566254 NKX2-3Q8TAU0 364 aa12.63□□□□□ -0.39
CFDP1-206ENST00000566254 USP19O94966 1318 aa12.62□□□□□ -0.39
CFDP1-206ENST00000566254 CRB1P82279 1406 aa12.62□□□□□ -0.39
CFDP1-206ENST00000566254 LRRC37A3O60309 1634 aa12.62□□□□□ -0.39
CFDP1-206ENST00000566254 POLR3AO14802 1390 aaPredicted RBP12.62□□□□□ -0.39
CFDP1-206ENST00000566254 ZBTB7CA1YPR0 619 aa12.62□□□□□ -0.39
CFDP1-206ENST00000566254 PDIA4P13667 645 aaKnown RBP12.62□□□□□ -0.39
CFDP1-206ENST00000566254 DDB1Q16531 1140 aa12.62□□□□□ -0.39
CFDP1-206ENST00000566254 CCDC24Q8N4L8 307 aa12.62□□□□□ -0.39
CFDP1-206ENST00000566254 OCSTAMPQ9BR26 566 aa12.62□□□□□ -0.39
CFDP1-206ENST00000566254 UNC93B1Q9H1C4 597 aa12.62□□□□□ -0.39
CFDP1-206ENST00000566254 TFIP11Q9UBB9 837 aaKnown RBP12.62□□□□□ -0.39
CFDP1-206ENST00000566254 GCP02774 474 aa12.61□□□□□ -0.39
CFDP1-206ENST00000566254 RFX1P22670 979 aa12.61□□□□□ -0.39
CFDP1-206ENST00000566254 PTK2Q05397 1052 aa12.61□□□□□ -0.39
CFDP1-206ENST00000566254 PBXIP1Q96AQ6 731 aa12.61□□□□□ -0.39
CFDP1-206ENST00000566254 CDK19Q9BWU1 502 aa12.61□□□□□ -0.39
CFDP1-206ENST00000566254 STK32BQ9NY57 414 aa12.61□□□□□ -0.39
CFDP1-206ENST00000566254 SBF2Q86WG5 1849 aa12.6□□□□□ -0.39
CFDP1-206ENST00000566254 RAB3GAP2Q9H2M9 1393 aa12.6□□□□□ -0.39
CFDP1-206ENST00000566254 SRPK2P78362 688 aaKnown RBP12.6□□□□□ -0.39
CFDP1-206ENST00000566254 SLC15A2Q16348 729 aa12.6□□□□□ -0.39
CFDP1-206ENST00000566254 TXNRD1Q16881 649 aa12.6□□□□□ -0.39
CFDP1-206ENST00000566254 MTFR1LQ9H019 292 aa12.6□□□□□ -0.39
CFDP1-206ENST00000566254 S1PR4O95977 384 aa12.59□□□□□ -0.39
CFDP1-206ENST00000566254 MARCH10Q8NA82 808 aaPredicted RBP12.59□□□□□ -0.39
CFDP1-206ENST00000566254 TOPAZ1Q8N9V7 1692 aa12.58□□□□□ -0.4
CFDP1-206ENST00000566254 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.58□□□□□ -0.4
CFDP1-206ENST00000566254 GIGYF1O75420 1035 aaPredicted RBP12.58□□□□□ -0.4
CFDP1-206ENST00000566254 LMOD1P29536 600 aaPredicted RBP12.58□□□□□ -0.4
CFDP1-206ENST00000566254 TBC1D9Q6ZT07 1266 aa12.58□□□□□ -0.4
CFDP1-206ENST00000566254 TOM1L2Q6ZVM7 507 aa12.58□□□□□ -0.4
CFDP1-206ENST00000566254 NLRP13Q86W25 1043 aa12.58□□□□□ -0.4
CFDP1-206ENST00000566254 RETREG2Q8NC44 543 aa12.58□□□□□ -0.4
CFDP1-206ENST00000566254 CHD4Q14839 1912 aa12.58□□□□□ -0.4
CFDP1-206ENST00000566254 ARHGEF28Q8N1W1 1705 aaKnown RBP12.57□□□□□ -0.4
CFDP1-206ENST00000566254 DCAF11Q8TEB1 546 aa12.57□□□□□ -0.4
CFDP1-206ENST00000566254 MAFBQ9Y5Q3 323 aaPredicted RBP12.57□□□□□ -0.4
CFDP1-206ENST00000566254 GPR162Q16538 588 aa12.56□□□□□ -0.4
CFDP1-206ENST00000566254 SH3BP5LQ7L8J4 393 aa12.56□□□□□ -0.4
CFDP1-206ENST00000566254 FCF1Q9Y324 198 aaKnown RBP12.56□□□□□ -0.4
CFDP1-206ENST00000566254 BCL9O00512 1426 aa12.55□□□□□ -0.4
CFDP1-206ENST00000566254 ATP9BO43861 1147 aa12.55□□□□□ -0.4
CFDP1-206ENST00000566254 ARHGAP9Q9BRR9 750 aa12.55□□□□□ -0.4
CFDP1-206ENST00000566254 TRAIPQ9BWF2 469 aa12.55□□□□□ -0.4
CFDP1-206ENST00000566254 AATKQ6ZMQ8 1374 aa12.55□□□□□ -0.4
CFDP1-206ENST00000566254 PIK3CDO00329 1044 aa12.54□□□□□ -0.4
CFDP1-206ENST00000566254 ADAM32Q8TC27 787 aa12.54□□□□□ -0.4
CFDP1-206ENST00000566254 ZNF592Q92610 1267 aa12.54□□□□□ -0.4
CFDP1-206ENST00000566254 HCSTQ9UBK5 93 aa12.54□□□□□ -0.4
CFDP1-206ENST00000566254 MAP3K5Q99683 1374 aa12.54□□□□□ -0.4
CFDP1-206ENST00000566254 MCCD1P59942 119 aaPredicted RBP12.53□□□□□ -0.4
CFDP1-206ENST00000566254 TRIM26Q12899 539 aaPredicted RBP12.53□□□□□ -0.4
CFDP1-206ENST00000566254 NFATC2IPQ8NCF5 419 aa12.53□□□□□ -0.4
CFDP1-206ENST00000566254 PCDHB9Q9Y5E1 797 aa12.53□□□□□ -0.4
CFDP1-206ENST00000566254 WDR17Q8IZU2 1322 aa12.53□□□□□ -0.4
CFDP1-206ENST00000566254 PPIP5K1Q6PFW1 1433 aa12.53□□□□□ -0.4
CFDP1-206ENST00000566254 AKAP12Q02952 1782 aa12.52□□□□□ -0.41
CFDP1-206ENST00000566254 BAP1Q92560 729 aa12.52□□□□□ -0.41
CFDP1-206ENST00000566254 CDCA7Q9BWT1 371 aaPredicted RBP12.52□□□□□ -0.41
CFDP1-206ENST00000566254 CEP126Q9P2H0 1117 aa12.52□□□□□ -0.41
CFDP1-206ENST00000566254 WNK3Q9BYP7 1800 aa12.52□□□□□ -0.41
CFDP1-206ENST00000566254 SLIT3O75094 1523 aa12.52□□□□□ -0.41
CFDP1-206ENST00000566254 ITGBL1O95965 494 aaPredicted RBP12.51□□□□□ -0.41
CFDP1-206ENST00000566254 KCNC4Q03721 635 aa12.51□□□□□ -0.41
CFDP1-206ENST00000566254 SH3RF1Q7Z6J0 888 aa12.51□□□□□ -0.41
CFDP1-206ENST00000566254 ZBTB33Q86T24 672 aa12.51□□□□□ -0.41
CFDP1-206ENST00000566254 CEP350Q5VT06 3117 aa12.5□□□□□ -0.41
CFDP1-206ENST00000566254 ZNF827Q17R98 1081 aa12.5□□□□□ -0.41
CFDP1-206ENST00000566254 FAM174AQ8TBP5 190 aa12.5□□□□□ -0.41
CFDP1-206ENST00000566254 RNF166Q96A37 237 aaPredicted RBP12.5□□□□□ -0.41
CFDP1-206ENST00000566254 ACSBG1Q96GR2 724 aa12.5□□□□□ -0.41
CFDP1-206ENST00000566254 SHANK3Q9BYB0 1731 aa12.5□□□□□ -0.41
CFDP1-206ENST00000566254 COL18A1P39060 1754 aa12.5□□□□□ -0.41
CFDP1-206ENST00000566254 PAPPAQ13219 1627 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms