RNA–Protein interactions for RNA: ENST00000566062.1

SUB1P4-201, Transcript of SUB1 homolog, transcriptional regulator pseudogene 4, humanhuman

BASIC

Gene SUB1P4, Length 339 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1P4-201ENST00000566062 NEFLP07196 543 aa2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 EIF4BP23588 611 aaKnown RBP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 GTF2F1P35269 517 aaKnown RBP eCLIP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 TNNI2P48788 182 aa2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 POU4F2Q12837 409 aa2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 CLN3Q13286 438 aa2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 SF3A1Q15459 793 aaKnown RBP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 ENOX2Q16206 610 aaKnown RBP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 LARP7Q4G0J3 582 aaKnown RBP eCLIP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 PKDCCQ504Y2 493 aa2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 ARSJQ5FYB0 599 aaPredicted RBP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 PPARGC1BQ86YN6 1023 aaKnown RBP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 FAM177A1Q8N128 213 aaPredicted RBP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 KDF1Q8NAX2 398 aaPredicted RBP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 ZNF280CQ8ND82 737 aa2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 DHX38Q92620 1227 aaKnown RBP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 DNAJC2Q99543 621 aaKnown RBP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 FHDC1Q9C0D6 1143 aaPredicted RBP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 ACBD3Q9H3P7 528 aa2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 POLMQ9NP87 494 aaPredicted RBP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 NLRP2Q9NX02 1062 aa2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 FAM13BQ9NYF5 915 aa2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.79□□□□□ -1.96
SUB1P4-201ENST00000566062 UBAP1LF5GYI3 381 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 TNFRSF10AO00220 468 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 OPLAHO14841 1288 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 SMARCA5O60264 1052 aaPredicted RBP2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 CPNE3O75131 537 aaKnown RBP2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 GADD45BO75293 160 aaPredicted RBP2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 TATP17735 454 aaPredicted RBP2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 ATP2B1P20020 1258 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 GNA15P30679 374 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 DNAJA1P31689 397 aaKnown RBP2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 GNL2Q13823 731 aaKnown RBP2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 NBPF1Q3BBV0 1214 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 C4orf17Q53FE4 359 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 LDLRAD1Q5T700 205 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 USPL1Q5W0Q7 1092 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 PI16Q6UXB8 463 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 PRICKLE2Q7Z3G6 844 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 KRTAP19-1Q8IUB9 90 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 GJD3Q8N144 294 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 PMFBP1Q8TBY8 1022 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 EPS8L3Q8TE67 593 aaKnown RBP2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 RHBDD1Q8TEB9 315 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 UBXN4Q92575 508 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 HSH2DQ96JZ2 352 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 SUSD3Q96L08 255 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 INSM2Q96T92 566 aaPredicted RBP2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 PRKAG2Q9UGJ0 569 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 FOXD3Q9UJU5 478 aaPredicted RBP2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 SPG7Q9UQ90 795 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 INPP5FQ9Y2H2 1132 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 HRH3Q9Y5N1 445 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 GJA3Q9Y6H8 435 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 AK5Q9Y6K8 562 aa2.78□□□□□ -1.96
SUB1P4-201ENST00000566062 FIGNL2A6NMB9 653 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 PHACTR2O75167 634 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 UPP2O95045 317 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 IGHA2P01877 340 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 RPLP1P05386 114 aaKnown RBP2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 HMGB1P09429 215 aaKnown RBP2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 BMP2P12643 396 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 RHOQP17081 205 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 SMPD1P17405 629 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 IRS1P35568 1242 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 IDH3AP50213 366 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 FANCCQ00597 558 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 RAD51AP2Q09MP3 1159 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 ZNF394Q53GI3 561 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 C6orf118Q5T5N4 469 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 C1orf53Q5VUE5 145 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 LRRC69Q6ZNQ3 347 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 Q6ZVU0 165 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 ZNF438Q7Z4V0 828 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 METTL16Q86W50 562 aaKnown RBP2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 CCDC74AQ96AQ1 378 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 ALKBH8Q96BT7 664 aaKnown RBP2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 KLRG1Q96E93 195 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 GRIP2Q9C0E4 1043 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 GGT7Q9UJ14 662 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 BCS1LQ9Y276 419 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 FNDC3AQ9Y2H6 1198 aaKnown RBP2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 RTCBQ9Y3I0 505 aaKnown RBP2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 PCDHGB7Q9Y5F8 929 aa2.77□□□□□ -1.97
SUB1P4-201ENST00000566062 FAM187AA6NFU0 413 aa2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 TNFRSF21O75509 655 aa2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 HSP90B1P14625 803 aaKnown RBP2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 TIMP2P16035 220 aa2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 CTSOP43234 321 aaPredicted RBP2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 ARSDP51689 593 aa2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 HIRAP54198 1017 aaPredicted RBP2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 ARID5AQ03989 594 aa2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 HIF1AQ16665 826 aa2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 MEI1Q5TIA1 1274 aa2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 TTC39BQ5VTQ0 682 aaPredicted RBP2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 NXPE4Q6UWF7 544 aa2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 DPH6Q7L8W6 267 aa2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 KRT25Q7Z3Z0 450 aa2.76□□□□□ -1.97
SUB1P4-201ENST00000566062 USP48Q86UV5 1035 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms