RNA–Protein interactions for RNA: ENST00000565121.1

NEIL1-209, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 2

Gene NEIL1, Length 1,169 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-209ENST00000565121 EPHX2P34913 555 aa17.48■□□□□ 0.39
NEIL1-209ENST00000565121 C3orf67Q6ZVT6 689 aa17.48■□□□□ 0.39
NEIL1-209ENST00000565121 ZNF34Q8IZ26 560 aa17.48■□□□□ 0.39
NEIL1-209ENST00000565121 ANXA1P04083 346 aa17.47■□□□□ 0.39
NEIL1-209ENST00000565121 EIF2S2P20042 333 aaKnown RBP17.47■□□□□ 0.39
NEIL1-209ENST00000565121 RPGRQ92834 1020 aaKnown RBP17.47■□□□□ 0.39
NEIL1-209ENST00000565121 MAPK8IP3Q9UPT6 1336 aa17.47■□□□□ 0.39
NEIL1-209ENST00000565121 COL4A5P29400 1685 aa17.46■□□□□ 0.39
NEIL1-209ENST00000565121 NTSR2O95665 410 aa17.46■□□□□ 0.39
NEIL1-209ENST00000565121 HOXA10P31260 410 aaPredicted RBP17.46■□□□□ 0.39
NEIL1-209ENST00000565121 PROSER3Q2NL68 480 aa17.46■□□□□ 0.39
NEIL1-209ENST00000565121 MAP1SQ66K74 1059 aaPredicted RBP17.46■□□□□ 0.39
NEIL1-209ENST00000565121 LRP10Q7Z4F1 713 aa17.46■□□□□ 0.39
NEIL1-209ENST00000565121 PSMD1Q99460 953 aa17.46■□□□□ 0.39
NEIL1-209ENST00000565121 TSPYL4Q9UJ04 414 aa17.46■□□□□ 0.39
NEIL1-209ENST00000565121 GJA3Q9Y6H8 435 aa17.46■□□□□ 0.39
NEIL1-209ENST00000565121 CNTNAP1P78357 1384 aa17.45■□□□□ 0.38
NEIL1-209ENST00000565121 RIPK4P57078 832 aa17.45■□□□□ 0.38
NEIL1-209ENST00000565121 PDIA6Q15084 440 aa17.45■□□□□ 0.38
NEIL1-209ENST00000565121 GIGYF2Q6Y7W6 1299 aaKnown RBP17.45■□□□□ 0.38
NEIL1-209ENST00000565121 TMEM88BA6NKF7 163 aa17.44■□□□□ 0.38
NEIL1-209ENST00000565121 CNTROBQ8N137 903 aa17.44■□□□□ 0.38
NEIL1-209ENST00000565121 JDP2Q8WYK2 163 aa17.44■□□□□ 0.38
NEIL1-209ENST00000565121 NECTIN2Q92692 538 aa17.44■□□□□ 0.38
NEIL1-209ENST00000565121 FOXN1O15353 648 aa17.43■□□□□ 0.38
NEIL1-209ENST00000565121 VEGFBP49765 207 aa17.43■□□□□ 0.38
NEIL1-209ENST00000565121 CC2D2BQ6DHV5 1058 aa17.43■□□□□ 0.38
NEIL1-209ENST00000565121 GPC2Q8N158 579 aa17.43■□□□□ 0.38
NEIL1-209ENST00000565121 RBM17Q96I25 401 aaKnown RBP17.43■□□□□ 0.38
NEIL1-209ENST00000565121 CRAMP1Q96RY5 1269 aa17.43■□□□□ 0.38
NEIL1-209ENST00000565121 PNNQ9H307 717 aaKnown RBP17.43■□□□□ 0.38
NEIL1-209ENST00000565121 MYBBP1AQ9BQG0 1328 aaKnown RBP17.43■□□□□ 0.38
NEIL1-209ENST00000565121 IBTKQ9P2D0 1353 aaPredicted RBP17.42■□□□□ 0.38
NEIL1-209ENST00000565121 PPEF1O14829 653 aaPredicted RBP17.42■□□□□ 0.38
NEIL1-209ENST00000565121 EIF6P56537 245 aaKnown RBP17.42■□□□□ 0.38
NEIL1-209ENST00000565121 FMR1Q06787 632 aaKnown RBP eCLIP17.42■□□□□ 0.38
NEIL1-209ENST00000565121 LARGE2Q8N3Y3 721 aa17.42■□□□□ 0.38
NEIL1-209ENST00000565121 ADAMTSL1Q8N6G6 1762 aa17.42■□□□□ 0.38
NEIL1-209ENST00000565121 RIC1Q4ADV7 1423 aa17.41■□□□□ 0.38
NEIL1-209ENST00000565121 TMPOP42166 694 aaKnown RBP17.41■□□□□ 0.38
NEIL1-209ENST00000565121 EPS15P42566 896 aa17.41■□□□□ 0.38
NEIL1-209ENST00000565121 PPP1R42Q7Z4L9 355 aa17.41■□□□□ 0.38
NEIL1-209ENST00000565121 PNMA8AQ86V59 439 aaPredicted RBP17.41■□□□□ 0.38
NEIL1-209ENST00000565121 ZNF428Q96B54 188 aa17.41■□□□□ 0.38
NEIL1-209ENST00000565121 PRKRIP1Q9H875 184 aaPredicted RBP17.41■□□□□ 0.38
NEIL1-209ENST00000565121 ERBB4Q15303 1308 aa17.41■□□□□ 0.38
NEIL1-209ENST00000565121 LTBP1Q14766 1721 aa17.41■□□□□ 0.38
NEIL1-209ENST00000565121 ZEB1P37275 1124 aaPredicted RBP17.4■□□□□ 0.38
NEIL1-209ENST00000565121 SCNN1DP51172 638 aa17.4■□□□□ 0.38
NEIL1-209ENST00000565121 AIMP1Q12904 312 aaKnown RBP17.4■□□□□ 0.38
NEIL1-209ENST00000565121 KRT24Q2M2I5 525 aa17.4■□□□□ 0.38
NEIL1-209ENST00000565121 NLRP3Q96P20 1036 aa17.4■□□□□ 0.38
NEIL1-209ENST00000565121 UTP14AQ9BVJ6 771 aaKnown RBP17.4■□□□□ 0.38
NEIL1-209ENST00000565121 NEUROD2Q15784 382 aa17.39■□□□□ 0.37
NEIL1-209ENST00000565121 PARP10Q53GL7 1025 aa17.39■□□□□ 0.37
NEIL1-209ENST00000565121 SLC10A5Q5PT55 438 aa17.39■□□□□ 0.37
NEIL1-209ENST00000565121 COPS6Q7L5N1 327 aa17.39■□□□□ 0.37
NEIL1-209ENST00000565121 CCDC146Q8IYE0 955 aa17.39■□□□□ 0.37
NEIL1-209ENST00000565121 XAGE3Q8WTP9 111 aa17.39■□□□□ 0.37
NEIL1-209ENST00000565121 PPIP5K2O43314 1243 aa17.38■□□□□ 0.37
NEIL1-209ENST00000565121 HCLS1P14317 486 aaPredicted RBP17.38■□□□□ 0.37
NEIL1-209ENST00000565121 AOC3Q16853 763 aa17.38■□□□□ 0.37
NEIL1-209ENST00000565121 ABCC4O15439 1325 aa17.38■□□□□ 0.37
NEIL1-209ENST00000565121 LMOD1P29536 600 aaPredicted RBP17.37■□□□□ 0.37
NEIL1-209ENST00000565121 DEFB115Q30KQ5 88 aa17.37■□□□□ 0.37
NEIL1-209ENST00000565121 NIM1KQ8IY84 436 aa17.37■□□□□ 0.37
NEIL1-209ENST00000565121 ATP6V0A2Q9Y487 856 aa17.37■□□□□ 0.37
NEIL1-209ENST00000565121 RASSF10A6NK89 507 aa17.36■□□□□ 0.37
NEIL1-209ENST00000565121 GRIPAP1Q4V328 841 aa17.36■□□□□ 0.37
NEIL1-209ENST00000565121 NLRP10Q86W26 655 aa17.36■□□□□ 0.37
NEIL1-209ENST00000565121 DDX21Q9NR30 783 aaKnown RBP eCLIP17.36■□□□□ 0.37
NEIL1-209ENST00000565121 ADAMTS8Q9UP79 889 aa17.36■□□□□ 0.37
NEIL1-209ENST00000565121 TRAF5O00463 557 aa17.35■□□□□ 0.37
NEIL1-209ENST00000565121 BABAM1Q9NWV8 329 aa17.35■□□□□ 0.37
NEIL1-209ENST00000565121 WBP1LQ9NX94 342 aa17.35■□□□□ 0.37
NEIL1-209ENST00000565121 ABT1Q9ULW3 272 aaKnown RBP17.35■□□□□ 0.37
NEIL1-209ENST00000565121 LAS1LQ9Y4W2 734 aaKnown RBP17.35■□□□□ 0.37
NEIL1-209ENST00000565121 CXCL9Q07325 125 aa17.34■□□□□ 0.37
NEIL1-209ENST00000565121 TCIRG1Q13488 830 aa17.34■□□□□ 0.37
NEIL1-209ENST00000565121 AIDAQ96BJ3 306 aa17.34■□□□□ 0.37
NEIL1-209ENST00000565121 WDR33Q9C0J8 1336 aaKnown RBP17.34■□□□□ 0.37
NEIL1-209ENST00000565121 TAF1P21675 1872 aa17.33■□□□□ 0.37
NEIL1-209ENST00000565121 CHL1O00533 1208 aa17.33■□□□□ 0.36
NEIL1-209ENST00000565121 CTCFP49711 727 aaPredicted RBP17.33■□□□□ 0.36
NEIL1-209ENST00000565121 LBX1P52954 281 aa17.33■□□□□ 0.36
NEIL1-209ENST00000565121 LMOD3Q0VAK6 560 aa17.33■□□□□ 0.36
NEIL1-209ENST00000565121 TMX4Q9H1E5 349 aaPredicted RBP17.33■□□□□ 0.36
NEIL1-209ENST00000565121 PRDM10Q9NQV6 1147 aa17.33■□□□□ 0.36
NEIL1-209ENST00000565121 TRMT112Q9UI30 125 aaKnown RBP17.33■□□□□ 0.36
NEIL1-209ENST00000565121 TRIM35Q9UPQ4 493 aa17.33■□□□□ 0.36
NEIL1-209ENST00000565121 LAMB2P55268 1798 aa17.33■□□□□ 0.36
NEIL1-209ENST00000565121 BBOX1O75936 387 aa17.32■□□□□ 0.36
NEIL1-209ENST00000565121 HSP90AB3PQ58FF7 597 aa17.32■□□□□ 0.36
NEIL1-209ENST00000565121 CST9Q5W186 159 aa17.32■□□□□ 0.36
NEIL1-209ENST00000565121 DPP8Q6V1X1 898 aaPredicted RBP17.32■□□□□ 0.36
NEIL1-209ENST00000565121 USP50Q70EL3 339 aaPredicted RBP17.32■□□□□ 0.36
NEIL1-209ENST00000565121 SP8Q8IXZ3 490 aa17.32■□□□□ 0.36
NEIL1-209ENST00000565121 MPNDQ8N594 471 aa17.32■□□□□ 0.36
NEIL1-209ENST00000565121 RTFDC1Q9BY42 306 aaPredicted RBP17.32■□□□□ 0.36
NEIL1-209ENST00000565121 CHPF2Q9P2E5 772 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms