RNA–Protein interactions for RNA: ENST00000564634.5

CYLD-208, Transcript of CYLD lysine 63 deubiquitinase, human

TSL 3

Gene CYLD, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CYLD-208	ENST00000564634	LMOD3	Q0VAK6	560 aa		33.05	■■■□□ 2.88
CYLD-208	ENST00000564634	CCDC184	Q52MB2	194 aa		33.05	■■■□□ 2.88
CYLD-208	ENST00000564634	FZD9	O00144	591 aa		33.04	■■■□□ 2.88
CYLD-208	ENST00000564634	PNISR	Q8TF01	805 aa	Known RBP	33.04	■■■□□ 2.88
CYLD-208	ENST00000564634	NUP98	P52948	1817 aa		33.03	■■■□□ 2.88
CYLD-208	ENST00000564634	MAP1S	Q66K74	1059 aa	Predicted RBP	33.03	■■■□□ 2.88
CYLD-208	ENST00000564634	COL4A5	P29400	1685 aa		33.03	■■■□□ 2.88
CYLD-208	ENST00000564634	AIDA	Q96BJ3	306 aa		33.02	■■■□□ 2.88
CYLD-208	ENST00000564634	THUMPD2	Q9BTF0	503 aa	Known RBP	33.02	■■■□□ 2.88
CYLD-208	ENST00000564634	NYX	Q9GZU5	481 aa		33.02	■■■□□ 2.88
CYLD-208	ENST00000564634	CRY2	Q49AN0	593 aa		33.01	■■■□□ 2.87
CYLD-208	ENST00000564634	TTLL7	Q6ZT98	887 aa		33.01	■■■□□ 2.87
CYLD-208	ENST00000564634	RRP7A	Q9Y3A4	280 aa	Known RBP	33.01	■■■□□ 2.87
CYLD-208	ENST00000564634	MAP3K15	Q6ZN16	1313 aa		33.01	■■■□□ 2.87
CYLD-208	ENST00000564634	GPT	P24298	496 aa		33	■■■□□ 2.87
CYLD-208	ENST00000564634	NEUROD2	Q15784	382 aa		33	■■■□□ 2.87
CYLD-208	ENST00000564634	SLC51A	Q86UW1	340 aa		33	■■■□□ 2.87
CYLD-208	ENST00000564634	PNMA8A	Q86V59	439 aa	Predicted RBP	33	■■■□□ 2.87
CYLD-208	ENST00000564634	GPC2	Q8N158	579 aa		33	■■■□□ 2.87
CYLD-208	ENST00000564634	JDP2	Q8WYK2	163 aa		33	■■■□□ 2.87
CYLD-208	ENST00000564634	PSMD1	Q99460	953 aa		33	■■■□□ 2.87
CYLD-208	ENST00000564634	KIF6	Q6ZMV9	814 aa		32.99	■■■□□ 2.87
CYLD-208	ENST00000564634	CNTROB	Q8N137	903 aa		32.99	■■■□□ 2.87
CYLD-208	ENST00000564634	RPGR	Q92834	1020 aa	Known RBP	32.99	■■■□□ 2.87
CYLD-208	ENST00000564634	GJA3	Q9Y6H8	435 aa		32.99	■■■□□ 2.87
CYLD-208	ENST00000564634	MYL6B	P14649	208 aa		32.98	■■■□□ 2.87
CYLD-208	ENST00000564634	ZBTB3	Q9H5J0	574 aa		32.98	■■■□□ 2.87
CYLD-208	ENST00000564634	MRS2	Q9HD23	443 aa		32.98	■■■□□ 2.87
CYLD-208	ENST00000564634	UBN2	Q6ZU65	1347 aa		32.98	■■■□□ 2.87
CYLD-208	ENST00000564634	LTBP1	Q14766	1721 aa		32.97	■■■□□ 2.87
CYLD-208	ENST00000564634	ERVV-1	B6SEH8	477 aa		32.97	■■■□□ 2.87
CYLD-208	ENST00000564634	CTCF	P49711	727 aa	Predicted RBP	32.97	■■■□□ 2.87
CYLD-208	ENST00000564634	PRDM10	Q9NQV6	1147 aa		32.97	■■■□□ 2.87
CYLD-208	ENST00000564634	EIF6	P56537	245 aa	Known RBP	32.95	■■■□□ 2.87
CYLD-208	ENST00000564634	TCERG1	O14776	1098 aa	Known RBP	32.94	■■■□□ 2.86
CYLD-208	ENST00000564634	EIF4A1	P60842	406 aa	Known RBP	32.94	■■■□□ 2.86
CYLD-208	ENST00000564634	IBTK	Q9P2D0	1353 aa	Predicted RBP	32.94	■■■□□ 2.86
CYLD-208	ENST00000564634	RIC1	Q4ADV7	1423 aa		32.94	■■■□□ 2.86
CYLD-208	ENST00000564634	RASSF10	A6NK89	507 aa		32.93	■■■□□ 2.86
CYLD-208	ENST00000564634	SUSD4	Q5VX71	490 aa		32.93	■■■□□ 2.86
CYLD-208	ENST00000564634	CC2D2B	Q6DHV5	1058 aa		32.93	■■■□□ 2.86
CYLD-208	ENST00000564634	TRIM35	Q9UPQ4	493 aa		32.93	■■■□□ 2.86
CYLD-208	ENST00000564634	LMOD1	P29536	600 aa	Predicted RBP	32.92	■■■□□ 2.86
CYLD-208	ENST00000564634	BABAM1	Q9NWV8	329 aa		32.92	■■■□□ 2.86
CYLD-208	ENST00000564634	WBP1L	Q9NX94	342 aa		32.92	■■■□□ 2.86
CYLD-208	ENST00000564634	ABT1	Q9ULW3	272 aa	Known RBP	32.92	■■■□□ 2.86
CYLD-208	ENST00000564634	APAF1	O14727	1248 aa		32.91	■■■□□ 2.86
CYLD-208	ENST00000564634	PPEF1	O14829	653 aa	Predicted RBP	32.91	■■■□□ 2.86
CYLD-208	ENST00000564634	LBX1	P52954	281 aa		32.91	■■■□□ 2.86
CYLD-208	ENST00000564634	DEFB115	Q30KQ5	88 aa		32.91	■■■□□ 2.86
CYLD-208	ENST00000564634	LARGE2	Q8N3Y3	721 aa		32.91	■■■□□ 2.86
CYLD-208	ENST00000564634	HOXA10	P31260	410 aa	Predicted RBP	32.9	■■■□□ 2.86
CYLD-208	ENST00000564634	C3orf67	Q6ZVT6	689 aa		32.9	■■■□□ 2.86
CYLD-208	ENST00000564634	SCNN1D	P51172	638 aa		32.89	■■■□□ 2.86
CYLD-208	ENST00000564634	TSPYL4	Q9UJ04	414 aa		32.89	■■■□□ 2.86
CYLD-208	ENST00000564634	NTSR2	O95665	410 aa		32.88	■■■□□ 2.85
CYLD-208	ENST00000564634	FMR1	Q06787	632 aa	Known RBP eCLIP	32.88	■■■□□ 2.85
CYLD-208	ENST00000564634	RBM17	Q96I25	401 aa	Known RBP	32.88	■■■□□ 2.85
CYLD-208	ENST00000564634	WDR33	Q9C0J8	1336 aa	Known RBP	32.87	■■■□□ 2.85
CYLD-208	ENST00000564634	EPS15	P42566	896 aa		32.87	■■■□□ 2.85
CYLD-208	ENST00000564634	DDX21	Q9NR30	783 aa	Known RBP eCLIP	32.87	■■■□□ 2.85
CYLD-208	ENST00000564634	ZNF34	Q8IZ26	560 aa		32.86	■■■□□ 2.85
CYLD-208	ENST00000564634	CRAMP1	Q96RY5	1269 aa		32.86	■■■□□ 2.85
CYLD-208	ENST00000564634	HSPA8	P11142	646 aa	Known RBP	32.85	■■■□□ 2.85
CYLD-208	ENST00000564634	NIM1K	Q8IY84	436 aa		32.85	■■■□□ 2.85
CYLD-208	ENST00000564634	PPIP5K2	O43314	1243 aa		32.83	■■■□□ 2.85
CYLD-208	ENST00000564634	GIGYF2	Q6Y7W6	1299 aa	Known RBP	32.83	■■■□□ 2.85
CYLD-208	ENST00000564634	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	32.83	■■■□□ 2.85
CYLD-208	ENST00000564634	GRIPAP1	Q4V328	841 aa		32.82	■■■□□ 2.84
CYLD-208	ENST00000564634	TRAF5	O00463	557 aa		32.81	■■■□□ 2.84
CYLD-208	ENST00000564634	CHL1	O00533	1208 aa		32.81	■■■□□ 2.84
CYLD-208	ENST00000564634	GRM1	Q13255	1194 aa		32.81	■■■□□ 2.84
CYLD-208	ENST00000564634	AOC3	Q16853	763 aa		32.81	■■■□□ 2.84
CYLD-208	ENST00000564634	PPP1R42	Q7Z4L9	355 aa		32.81	■■■□□ 2.84
CYLD-208	ENST00000564634	THSD7B	Q9C0I4	1608 aa		32.8	■■■□□ 2.84
CYLD-208	ENST00000564634	ERBB4	Q15303	1308 aa		32.79	■■■□□ 2.84
CYLD-208	ENST00000564634	MAP2K1	Q02750	393 aa	Predicted RBP	32.79	■■■□□ 2.84
CYLD-208	ENST00000564634	LAS1L	Q9Y4W2	734 aa	Known RBP	32.79	■■■□□ 2.84
CYLD-208	ENST00000564634	ANXA1	P04083	346 aa		32.78	■■■□□ 2.84
CYLD-208	ENST00000564634	EIF2S2	P20042	333 aa	Known RBP	32.78	■■■□□ 2.84
CYLD-208	ENST00000564634	PARP10	Q53GL7	1025 aa		32.78	■■■□□ 2.84
CYLD-208	ENST00000564634	USP50	Q70EL3	339 aa	Predicted RBP	32.78	■■■□□ 2.84
CYLD-208	ENST00000564634	CAPNS2	Q96L46	248 aa		32.78	■■■□□ 2.84
CYLD-208	ENST00000564634	NLRP3	Q96P20	1036 aa		32.78	■■■□□ 2.84
CYLD-208	ENST00000564634	TRPM7	Q96QT4	1865 aa		32.78	■■■□□ 2.84
CYLD-208	ENST00000564634	CALD1	Q05682	793 aa	Known RBP	32.77	■■■□□ 2.84
CYLD-208	ENST00000564634	PROSER3	Q2NL68	480 aa		32.77	■■■□□ 2.84
CYLD-208	ENST00000564634	TMX4	Q9H1E5	349 aa	Predicted RBP	32.77	■■■□□ 2.84
CYLD-208	ENST00000564634	ABCC4	O15439	1325 aa		32.77	■■■□□ 2.84
CYLD-208	ENST00000564634	CYP4F22	Q6NT55	531 aa		32.76	■■■□□ 2.83
CYLD-208	ENST00000564634	LRP10	Q7Z4F1	713 aa		32.76	■■■□□ 2.83
CYLD-208	ENST00000564634	CFAP44	Q96MT7	982 aa		32.76	■■■□□ 2.83
CYLD-208	ENST00000564634	UTP14A	Q9BVJ6	771 aa	Known RBP	32.76	■■■□□ 2.83
CYLD-208	ENST00000564634	ATP6V0A2	Q9Y487	856 aa		32.76	■■■□□ 2.83
CYLD-208	ENST00000564634	LAMB2	P55268	1798 aa		32.75	■■■□□ 2.83
CYLD-208	ENST00000564634	ANKRD36C	Q5JPF3	1778 aa		32.74	■■■□□ 2.83
CYLD-208	ENST00000564634	PDIA6	Q15084	440 aa		32.74	■■■□□ 2.83
CYLD-208	ENST00000564634	CST9	Q5W186	159 aa		32.74	■■■□□ 2.83
CYLD-208	ENST00000564634	GPRC5D	Q9NZD1	345 aa		32.74	■■■□□ 2.83
CYLD-208	ENST00000564634	ECE1	P42892	770 aa		32.72	■■■□□ 2.83

Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms