RNA–Protein interactions for RNA: ENST00000564594.1

HMGN2P46-206, Transcript of high mobility group nucleosomal binding domain 2 pseudogene 46, human

TSL 4

Gene HMGN2P46, Length 572 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGN2P46-206	ENST00000564594	RNF123	Q5XPI4	1314 aa		13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	MAP3K15	Q6ZN16	1313 aa		13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	COL4A5	P29400	1685 aa		13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	KDM3B	Q7LBC6	1761 aa		13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	GTF2E1	P29083	439 aa	Predicted RBP	13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	HOXA10	P31260	410 aa	Predicted RBP	13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	CC2D2B	Q6DHV5	1058 aa		13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	TTLL7	Q6ZT98	887 aa		13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	NUTM1	Q86Y26	1132 aa		13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	GPC2	Q8N158	579 aa		13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	PNISR	Q8TF01	805 aa	Known RBP	13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	NYX	Q9GZU5	481 aa		13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	PRDM10	Q9NQV6	1147 aa		13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.92	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	UBN2	Q6ZU65	1347 aa		13.91	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	EIF4A1	P60842	406 aa	Known RBP	13.91	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	PNMA8A	Q86V59	439 aa	Predicted RBP	13.91	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	PLEKHF1	Q96S99	279 aa		13.91	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	NUP98	P52948	1817 aa		13.91	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	RASSF10	A6NK89	507 aa		13.9	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	MAP1S	Q66K74	1059 aa	Predicted RBP	13.9	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	CNTROB	Q8N137	903 aa		13.9	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	WBP1L	Q9NX94	342 aa		13.9	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	DLG5	Q8TDM6	1919 aa		13.9	□□□□□ -0.18
HMGN2P46-206	ENST00000564594	CTCF	P49711	727 aa	Predicted RBP	13.89	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	GRIPAP1	Q4V328	841 aa		13.89	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	SLC51A	Q86UW1	340 aa		13.89	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	ZNF34	Q8IZ26	560 aa		13.89	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	NGEF	Q8N5V2	710 aa		13.89	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	JDP2	Q8WYK2	163 aa		13.89	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	CRAMP1	Q96RY5	1269 aa		13.89	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	SPINK5	Q9NQ38	1064 aa	Predicted RBP	13.89	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	CLEC11A	Q9Y240	323 aa		13.89	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	RRP7A	Q9Y3A4	280 aa	Known RBP	13.89	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	LTBP1	Q14766	1721 aa		13.89	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	NTSR2	O95665	410 aa		13.88	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	GPT	P24298	496 aa		13.88	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	NFE2L2	Q16236	605 aa		13.88	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	SUSD4	Q5VX71	490 aa		13.88	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	KIF6	Q6ZMV9	814 aa		13.88	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	LRP10	Q7Z4F1	713 aa		13.88	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	AIDA	Q96BJ3	306 aa		13.88	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	THUMPD2	Q9BTF0	503 aa	Known RBP	13.88	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	ZBTB3	Q9H5J0	574 aa		13.88	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	ERBB4	Q15303	1308 aa		13.88	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	MYL6B	P14649	208 aa		13.87	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	SCNN1D	P51172	638 aa		13.87	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	EIF6	P56537	245 aa	Known RBP	13.87	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.87	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	C3orf67	Q6ZVT6	689 aa		13.87	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	RPGR	Q92834	1020 aa	Known RBP	13.87	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	DEFB115	Q30KQ5	88 aa		13.86	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	LARGE2	Q8N3Y3	721 aa		13.86	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	DDX21	Q9NR30	783 aa	Known RBP eCLIP	13.86	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	GJA3	Q9Y6H8	435 aa		13.86	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	PPEF1	O14829	653 aa	Predicted RBP	13.85	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	NEFM	P07197	916 aa		13.85	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	EPS15	P42566	896 aa		13.85	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	LBX1	P52954	281 aa		13.85	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	PDIA6	Q15084	440 aa		13.85	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	PARP10	Q53GL7	1025 aa		13.85	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	RBM17	Q96I25	401 aa	Known RBP	13.85	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	WDR33	Q9C0J8	1336 aa	Known RBP	13.85	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	HSPA8	P11142	646 aa	Known RBP	13.84	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	LMOD1	P29536	600 aa	Predicted RBP	13.84	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	SLC10A5	Q5PT55	438 aa		13.84	□□□□□ -0.19
HMGN2P46-206	ENST00000564594	MAP2K1	Q02750	393 aa	Predicted RBP	13.83	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	FMR1	Q06787	632 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	USP50	Q70EL3	339 aa	Predicted RBP	13.83	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	PPP1R42	Q7Z4L9	355 aa		13.83	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	NIM1K	Q8IY84	436 aa		13.83	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	VPS33B	Q9H267	617 aa		13.83	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	ATP6V0A2	Q9Y487	856 aa		13.83	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	THSD7B	Q9C0I4	1608 aa		13.82	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	TCERG1	O14776	1098 aa	Known RBP	13.82	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	CST9	Q5W186	159 aa		13.82	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	NLRP3	Q96P20	1036 aa		13.82	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.82	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	TSPYL4	Q9UJ04	414 aa		13.82	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	ABT1	Q9ULW3	272 aa	Known RBP	13.82	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	TRAF5	O00463	557 aa		13.81	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	PPIP5K2	O43314	1243 aa		13.81	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	AOC3	Q16853	763 aa		13.81	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	PROSER3	Q2NL68	480 aa		13.81	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	CAPNS2	Q96L46	248 aa		13.81	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	UTP14A	Q9BVJ6	771 aa	Known RBP	13.81	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	GPRC5D	Q9NZD1	345 aa		13.81	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	ABCC4	O15439	1325 aa		13.81	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	CXCL9	Q07325	125 aa		13.8	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	PNN	Q9H307	717 aa	Known RBP	13.8	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	BABAM1	Q9NWV8	329 aa		13.8	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	ZNRF3	Q9ULT6	936 aa		13.8	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	MAPK8IP3	Q9UPT6	1336 aa		13.8	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	TRPM7	Q96QT4	1865 aa		13.8	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	ANXA1	P04083	346 aa		13.79	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	EIF2S2	P20042	333 aa	Known RBP	13.79	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	NLRP10	Q86W26	655 aa		13.79	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	ADARB2	Q9NS39	739 aa	Known RBP	13.79	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	TLL2	Q9Y6L7	1015 aa		13.79	□□□□□ -0.2
HMGN2P46-206	ENST00000564594	BBOX1	O75936	387 aa		13.78	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 29 ms