RNA–Protein interactions for RNA: ENST00000563346.1

TSC2-219, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 553 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-219ENST00000563346 ANXA1P04083 346 aa22.63■■□□□ 1.21
TSC2-219ENST00000563346 HSPA1AP0DMV8 641 aaKnown RBP22.63■■□□□ 1.21
TSC2-219ENST00000563346 HSPA1BP0DMV9 641 aaKnown RBP22.63■■□□□ 1.21
TSC2-219ENST00000563346 IARSP41252 1262 aaKnown RBP22.63■■□□□ 1.21
TSC2-219ENST00000563346 PDIA6Q15084 440 aa22.63■■□□□ 1.21
TSC2-219ENST00000563346 PROSER3Q2NL68 480 aa22.63■■□□□ 1.21
TSC2-219ENST00000563346 RBM17Q96I25 401 aaKnown RBP22.63■■□□□ 1.21
TSC2-219ENST00000563346 NTSR2O95665 410 aa22.62■■□□□ 1.21
TSC2-219ENST00000563346 CC2D2BQ6DHV5 1058 aa22.62■■□□□ 1.21
TSC2-219ENST00000563346 CHADLQ6NUI6 762 aa22.62■■□□□ 1.21
TSC2-219ENST00000563346 LRP10Q7Z4F1 713 aa22.62■■□□□ 1.21
TSC2-219ENST00000563346 HOXA10P31260 410 aaPredicted RBP22.61■■□□□ 1.21
TSC2-219ENST00000563346 AIMP1Q12904 312 aaKnown RBP22.61■■□□□ 1.21
TSC2-219ENST00000563346 UTP14AQ9BVJ6 771 aaKnown RBP22.61■■□□□ 1.21
TSC2-219ENST00000563346 COPS6Q7L5N1 327 aa22.6■■□□□ 1.21
TSC2-219ENST00000563346 L3MBTL3Q96JM7 780 aaPredicted RBP22.6■■□□□ 1.21
TSC2-219ENST00000563346 NLRP3Q96P20 1036 aa22.6■■□□□ 1.21
TSC2-219ENST00000563346 PSMD1Q99460 953 aa22.6■■□□□ 1.21
TSC2-219ENST00000563346 ADAMTS8Q9UP79 889 aa22.6■■□□□ 1.21
TSC2-219ENST00000563346 ZNF541Q9H0D2 1346 aa22.59■■□□□ 1.21
TSC2-219ENST00000563346 SCN4AP35499 1836 aa22.59■■□□□ 1.21
TSC2-219ENST00000563346 CHL1O00533 1208 aa22.59■■□□□ 1.21
TSC2-219ENST00000563346 HSP90AB3PQ58FF7 597 aa22.59■■□□□ 1.21
TSC2-219ENST00000563346 XAGE3Q8WTP9 111 aa22.59■■□□□ 1.21
TSC2-219ENST00000563346 JDP2Q8WYK2 163 aa22.59■■□□□ 1.21
TSC2-219ENST00000563346 CRAMP1Q96RY5 1269 aa22.59■■□□□ 1.21
TSC2-219ENST00000563346 TRIM35Q9UPQ4 493 aa22.59■■□□□ 1.21
TSC2-219ENST00000563346 TCERG1O14776 1098 aaKnown RBP22.58■■□□□ 1.21
TSC2-219ENST00000563346 PPEF1O14829 653 aaPredicted RBP22.58■■□□□ 1.21
TSC2-219ENST00000563346 POTEIP0CG38 1075 aa22.58■■□□□ 1.21
TSC2-219ENST00000563346 POTEJP0CG39 1038 aa22.58■■□□□ 1.21
TSC2-219ENST00000563346 GRIPAP1Q4V328 841 aa22.58■■□□□ 1.21
TSC2-219ENST00000563346 TMX4Q9H1E5 349 aaPredicted RBP22.58■■□□□ 1.21
TSC2-219ENST00000563346 KRT24Q2M2I5 525 aa22.57■■□□□ 1.2
TSC2-219ENST00000563346 TAF1DQ9H5J8 278 aaPredicted RBP22.57■■□□□ 1.2
TSC2-219ENST00000563346 DDX21Q9NR30 783 aaKnown RBP eCLIP22.57■■□□□ 1.2
TSC2-219ENST00000563346 ANKRD36CQ5JPF3 1778 aa22.57■■□□□ 1.2
TSC2-219ENST00000563346 FZD9O00144 591 aa22.56■■□□□ 1.2
TSC2-219ENST00000563346 C3orf67Q6ZVT6 689 aa22.56■■□□□ 1.2
TSC2-219ENST00000563346 LDHDQ86WU2 507 aa22.56■■□□□ 1.2
TSC2-219ENST00000563346 HACL1Q9UJ83 578 aa22.56■■□□□ 1.2
TSC2-219ENST00000563346 SNED1Q8TER0 1413 aa22.56■■□□□ 1.2
TSC2-219ENST00000563346 RNF123Q5XPI4 1314 aa22.56■■□□□ 1.2
TSC2-219ENST00000563346 EAPPQ56P03 285 aaPredicted RBP22.55■■□□□ 1.2
TSC2-219ENST00000563346 SLC10A5Q5PT55 438 aa22.55■■□□□ 1.2
TSC2-219ENST00000563346 PRKRIP1Q9H875 184 aaPredicted RBP22.55■■□□□ 1.2
TSC2-219ENST00000563346 EIF6P56537 245 aaKnown RBP22.54■■□□□ 1.2
TSC2-219ENST00000563346 TCIRG1Q13488 830 aa22.54■■□□□ 1.2
TSC2-219ENST00000563346 HDGFL1Q5TGJ6 251 aa22.54■■□□□ 1.2
TSC2-219ENST00000563346 NLRP10Q86W26 655 aa22.54■■□□□ 1.2
TSC2-219ENST00000563346 GPC2Q8N158 579 aa22.54■■□□□ 1.2
TSC2-219ENST00000563346 CHPF2Q9P2E5 772 aa22.54■■□□□ 1.2
TSC2-219ENST00000563346 CLEC11AQ9Y240 323 aa22.54■■□□□ 1.2
TSC2-219ENST00000563346 EPHX2P34913 555 aa22.53■■□□□ 1.2
TSC2-219ENST00000563346 LARGE2Q8N3Y3 721 aa22.53■■□□□ 1.2
TSC2-219ENST00000563346 TRMT112Q9UI30 125 aaKnown RBP22.53■■□□□ 1.2
TSC2-219ENST00000563346 HOXB7P09629 217 aa22.52■■□□□ 1.2
TSC2-219ENST00000563346 CFAP44Q96MT7 982 aa22.52■■□□□ 1.2
TSC2-219ENST00000563346 CREBZFQ9NS37 354 aa22.52■■□□□ 1.2
TSC2-219ENST00000563346 MKRN1Q9UHC7 482 aaKnown RBP22.52■■□□□ 1.2
TSC2-219ENST00000563346 GJA3Q9Y6H8 435 aa22.52■■□□□ 1.2
TSC2-219ENST00000563346 PNMA8AQ86V59 439 aaPredicted RBP22.51■■□□□ 1.19
TSC2-219ENST00000563346 DBF4Q9UBU7 674 aaPredicted RBP22.51■■□□□ 1.19
TSC2-219ENST00000563346 ATP6V0A2Q9Y487 856 aa22.51■■□□□ 1.19
TSC2-219ENST00000563346 ABCC4O15439 1325 aa22.51■■□□□ 1.19
TSC2-219ENST00000563346 SH3TC1Q8TE82 1336 aa22.51■■□□□ 1.19
TSC2-219ENST00000563346 HCLS1P14317 486 aaPredicted RBP22.5■■□□□ 1.19
TSC2-219ENST00000563346 LAMB2P55268 1798 aa22.49■■□□□ 1.19
TSC2-219ENST00000563346 LMOD1P29536 600 aaPredicted RBP22.49■■□□□ 1.19
TSC2-219ENST00000563346 DUSP27Q5VZP5 1158 aa22.49■■□□□ 1.19
TSC2-219ENST00000563346 ANKRD13DQ6ZTN6 518 aa22.49■■□□□ 1.19
TSC2-219ENST00000563346 SLC51AQ86UW1 340 aa22.49■■□□□ 1.19
TSC2-219ENST00000563346 NIM1KQ8IY84 436 aa22.49■■□□□ 1.19
TSC2-219ENST00000563346 PLBD2Q8NHP8 589 aa22.49■■□□□ 1.19
TSC2-219ENST00000563346 PPIP5K2O43314 1243 aa22.48■■□□□ 1.19
TSC2-219ENST00000563346 BBOX1O75936 387 aa22.48■■□□□ 1.19
TSC2-219ENST00000563346 DDX46Q7L014 1031 aaKnown RBP22.48■■□□□ 1.19
TSC2-219ENST00000563346 MBIPQ9NS73 344 aa22.48■■□□□ 1.19
TSC2-219ENST00000563346 COL4A5P29400 1685 aa22.48■■□□□ 1.19
TSC2-219ENST00000563346 APAF1O14727 1248 aa22.47■■□□□ 1.19
TSC2-219ENST00000563346 CALD1Q05682 793 aaKnown RBP22.47■■□□□ 1.19
TSC2-219ENST00000563346 SUPT20HQ8NEM7 779 aa22.47■■□□□ 1.19
TSC2-219ENST00000563346 ZNF428Q96B54 188 aa22.47■■□□□ 1.19
TSC2-219ENST00000563346 HYPKQ9NX55 129 aa22.47■■□□□ 1.19
TSC2-219ENST00000563346 PASKQ96RG2 1323 aa22.46■■□□□ 1.19
TSC2-219ENST00000563346 AOC3Q16853 763 aa22.45■■□□□ 1.18
TSC2-219ENST00000563346 DPP8Q6V1X1 898 aaPredicted RBP22.45■■□□□ 1.18
TSC2-219ENST00000563346 SP8Q8IXZ3 490 aa22.45■■□□□ 1.18
TSC2-219ENST00000563346 VPS33BQ9H267 617 aa22.45■■□□□ 1.18
TSC2-219ENST00000563346 ATP5J2-PTCD1G3V325 749 aa22.44■■□□□ 1.18
TSC2-219ENST00000563346 ITGBL1O95965 494 aaPredicted RBP22.44■■□□□ 1.18
TSC2-219ENST00000563346 GNAI1P63096 354 aa22.44■■□□□ 1.18
TSC2-219ENST00000563346 GRAPQ13588 217 aa22.44■■□□□ 1.18
TSC2-219ENST00000563346 MAP1SQ66K74 1059 aaPredicted RBP22.44■■□□□ 1.18
TSC2-219ENST00000563346 MPNDQ8N594 471 aa22.44■■□□□ 1.18
TSC2-219ENST00000563346 ADAMTSL1Q8N6G6 1762 aa22.44■■□□□ 1.18
TSC2-219ENST00000563346 GRAPLQ8TC17 118 aaPredicted RBP22.44■■□□□ 1.18
TSC2-219ENST00000563346 IFT57Q9NWB7 429 aa22.44■■□□□ 1.18
TSC2-219ENST00000563346 TMEM88BA6NKF7 163 aa22.43■■□□□ 1.18
TSC2-219ENST00000563346 CNTROBQ8N137 903 aa22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 170.7 ms