RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 MYL6BP14649 208 aa19.17■□□□□ 0.66
SPG7-205ENST00000561945 SYNE4Q8N205 404 aa19.17■□□□□ 0.66
SPG7-205ENST00000561945 NGEFQ8N5V2 710 aa19.17■□□□□ 0.66
SPG7-205ENST00000561945 CRAMP1Q96RY5 1269 aa19.17■□□□□ 0.66
SPG7-205ENST00000561945 ZBTB3Q9H5J0 574 aa19.17■□□□□ 0.66
SPG7-205ENST00000561945 SLC10A5Q5PT55 438 aa19.16■□□□□ 0.66
SPG7-205ENST00000561945 TSPYL4Q9UJ04 414 aa19.16■□□□□ 0.66
SPG7-205ENST00000561945 LAMB2P55268 1798 aa19.15■□□□□ 0.66
SPG7-205ENST00000561945 ITGBL1O95965 494 aaPredicted RBP19.15■□□□□ 0.66
SPG7-205ENST00000561945 TMPOP42166 694 aaKnown RBP19.15■□□□□ 0.66
SPG7-205ENST00000561945 RIPK4P57078 832 aa19.15■□□□□ 0.66
SPG7-205ENST00000561945 PARP10Q53GL7 1025 aa19.15■□□□□ 0.66
SPG7-205ENST00000561945 GPC2Q8N158 579 aa19.15■□□□□ 0.66
SPG7-205ENST00000561945 RNF123Q5XPI4 1314 aa19.15■□□□□ 0.66
SPG7-205ENST00000561945 GPTP24298 496 aa19.14■□□□□ 0.65
SPG7-205ENST00000561945 HACL1Q9UJ83 578 aa19.14■□□□□ 0.65
SPG7-205ENST00000561945 LTBP1Q14766 1721 aa19.14■□□□□ 0.65
SPG7-205ENST00000561945 LMOD3Q0VAK6 560 aa19.13■□□□□ 0.65
SPG7-205ENST00000561945 PPP1R42Q7Z4L9 355 aa19.13■□□□□ 0.65
SPG7-205ENST00000561945 SLC51AQ86UW1 340 aa19.13■□□□□ 0.65
SPG7-205ENST00000561945 PNMA8AQ86V59 439 aaPredicted RBP19.13■□□□□ 0.65
SPG7-205ENST00000561945 RPGRQ92834 1020 aaKnown RBP19.13■□□□□ 0.65
SPG7-205ENST00000561945 CNTNAP1P78357 1384 aa19.12■□□□□ 0.65
SPG7-205ENST00000561945 HSPA1AP0DMV8 641 aaKnown RBP19.12■□□□□ 0.65
SPG7-205ENST00000561945 HSPA1BP0DMV9 641 aaKnown RBP19.12■□□□□ 0.65
SPG7-205ENST00000561945 EPHX2P34913 555 aa19.12■□□□□ 0.65
SPG7-205ENST00000561945 C3orf67Q6ZVT6 689 aa19.12■□□□□ 0.65
SPG7-205ENST00000561945 RBM17Q96I25 401 aaKnown RBP19.12■□□□□ 0.65
SPG7-205ENST00000561945 MYBBP1AQ9BQG0 1328 aaKnown RBP19.11■□□□□ 0.65
SPG7-205ENST00000561945 PROSER3Q2NL68 480 aa19.11■□□□□ 0.65
SPG7-205ENST00000561945 JDP2Q8WYK2 163 aa19.11■□□□□ 0.65
SPG7-205ENST00000561945 VPS33BQ9H267 617 aa19.11■□□□□ 0.65
SPG7-205ENST00000561945 CHL1O00533 1208 aa19.1■□□□□ 0.65
SPG7-205ENST00000561945 PPEF1O14829 653 aaPredicted RBP19.09■□□□□ 0.65
SPG7-205ENST00000561945 NLRP3Q96P20 1036 aa19.09■□□□□ 0.65
SPG7-205ENST00000561945 UTP14AQ9BVJ6 771 aaKnown RBP19.09■□□□□ 0.65
SPG7-205ENST00000561945 EIF2S2P20042 333 aaKnown RBP19.08■□□□□ 0.64
SPG7-205ENST00000561945 HSP90AB3PQ58FF7 597 aa19.08■□□□□ 0.64
SPG7-205ENST00000561945 RTFDC1Q9BY42 306 aaPredicted RBP19.08■□□□□ 0.64
SPG7-205ENST00000561945 DDX21Q9NR30 783 aaKnown RBP eCLIP19.08■□□□□ 0.64
SPG7-205ENST00000561945 TRIM35Q9UPQ4 493 aa19.08■□□□□ 0.64
SPG7-205ENST00000561945 ATP6V0A2Q9Y487 856 aa19.08■□□□□ 0.64
SPG7-205ENST00000561945 LRRC37AA6NMS7 1700 aa19.08■□□□□ 0.64
SPG7-205ENST00000561945 TMEM88BA6NKF7 163 aa19.07■□□□□ 0.64
SPG7-205ENST00000561945 EIF6P56537 245 aaKnown RBP19.07■□□□□ 0.64
SPG7-205ENST00000561945 NLRP10Q86W26 655 aa19.07■□□□□ 0.64
SPG7-205ENST00000561945 MKRN1Q9UHC7 482 aaKnown RBP19.07■□□□□ 0.64
SPG7-205ENST00000561945 DDX60Q8IY21 1712 aaKnown RBP19.07■□□□□ 0.64
SPG7-205ENST00000561945 ANXA1P04083 346 aa19.06■□□□□ 0.64
SPG7-205ENST00000561945 HOXB7P09629 217 aa19.06■□□□□ 0.64
SPG7-205ENST00000561945 SCNN1DP51172 638 aa19.06■□□□□ 0.64
SPG7-205ENST00000561945 EAPPQ56P03 285 aaPredicted RBP19.06■□□□□ 0.64
SPG7-205ENST00000561945 COPS6Q7L5N1 327 aa19.06■□□□□ 0.64
SPG7-205ENST00000561945 RUNDC1Q96C34 613 aa19.06■□□□□ 0.64
SPG7-205ENST00000561945 ABCC4O15439 1325 aa19.05■□□□□ 0.64
SPG7-205ENST00000561945 CAPN15O75808 1086 aa19.05■□□□□ 0.64
SPG7-205ENST00000561945 TCIRG1Q13488 830 aa19.05■□□□□ 0.64
SPG7-205ENST00000561945 CNTROBQ8N137 903 aa19.05■□□□□ 0.64
SPG7-205ENST00000561945 THSD7BQ9C0I4 1608 aa19.04■□□□□ 0.64
SPG7-205ENST00000561945 RASSF10A6NK89 507 aa19.04■□□□□ 0.64
SPG7-205ENST00000561945 BBOX1O75936 387 aa19.04■□□□□ 0.64
SPG7-205ENST00000561945 SP8Q8IXZ3 490 aa19.04■□□□□ 0.64
SPG7-205ENST00000561945 LARGE2Q8N3Y3 721 aa19.04■□□□□ 0.64
SPG7-205ENST00000561945 XAGE3Q8WTP9 111 aa19.04■□□□□ 0.64
SPG7-205ENST00000561945 DUOX1Q9NRD9 1551 aa19.03■□□□□ 0.64
SPG7-205ENST00000561945 TNS4Q8IZW8 715 aa19.03■□□□□ 0.64
SPG7-205ENST00000561945 DDX10Q13206 875 aaKnown RBP19.02■□□□□ 0.64
SPG7-205ENST00000561945 KRT24Q2M2I5 525 aa19.02■□□□□ 0.64
SPG7-205ENST00000561945 MAP1SQ66K74 1059 aaPredicted RBP19.02■□□□□ 0.64
SPG7-205ENST00000561945 USP50Q70EL3 339 aaPredicted RBP19.02■□□□□ 0.64
SPG7-205ENST00000561945 SUPT20HQ8NEM7 779 aa19.02■□□□□ 0.64
SPG7-205ENST00000561945 CLEC11AQ9Y240 323 aa19.02■□□□□ 0.64
SPG7-205ENST00000561945 TRPM7Q96QT4 1865 aa19.02■□□□□ 0.64
SPG7-205ENST00000561945 SH3TC1Q8TE82 1336 aa19.01■□□□□ 0.63
SPG7-205ENST00000561945 TAF1P21675 1872 aa19.01■□□□□ 0.63
SPG7-205ENST00000561945 LMOD1P29536 600 aaPredicted RBP19.01■□□□□ 0.63
SPG7-205ENST00000561945 VEGFBP49765 207 aa19.01■□□□□ 0.63
SPG7-205ENST00000561945 NIM1KQ8IY84 436 aa19.01■□□□□ 0.63
SPG7-205ENST00000561945 CCDC146Q8IYE0 955 aa19.01■□□□□ 0.63
SPG7-205ENST00000561945 PLBD2Q8NHP8 589 aa19.01■□□□□ 0.63
SPG7-205ENST00000561945 CHPF2Q9P2E5 772 aa19.01■□□□□ 0.63
SPG7-205ENST00000561945 PPIP5K2O43314 1243 aa19■□□□□ 0.63
SPG7-205ENST00000561945 EPS15P42566 896 aa19■□□□□ 0.63
SPG7-205ENST00000561945 AOC3Q16853 763 aa19■□□□□ 0.63
SPG7-205ENST00000561945 TMC4Q7Z404 712 aa19■□□□□ 0.63
SPG7-205ENST00000561945 CFAP44Q96MT7 982 aa19■□□□□ 0.63
SPG7-205ENST00000561945 ISCA1Q9BUE6 129 aa19■□□□□ 0.63
SPG7-205ENST00000561945 TMX4Q9H1E5 349 aaPredicted RBP19■□□□□ 0.63
SPG7-205ENST00000561945 ZNRF3Q9ULT6 936 aa19■□□□□ 0.63
SPG7-205ENST00000561945 ADAMTS8Q9UP79 889 aa19■□□□□ 0.63
SPG7-205ENST00000561945 GJA3Q9Y6H8 435 aa19■□□□□ 0.63
SPG7-205ENST00000561945 CDHR2Q9BYE9 1310 aa19■□□□□ 0.63
SPG7-205ENST00000561945 HCLS1P14317 486 aaPredicted RBP18.99■□□□□ 0.63
SPG7-205ENST00000561945 KIAA2012Q0VF49 1180 aa18.99■□□□□ 0.63
SPG7-205ENST00000561945 AIMP1Q12904 312 aaKnown RBP18.99■□□□□ 0.63
SPG7-205ENST00000561945 GRAPQ13588 217 aa18.99■□□□□ 0.63
SPG7-205ENST00000561945 GRAPLQ8TC17 118 aaPredicted RBP18.99■□□□□ 0.63
SPG7-205ENST00000561945 GPRC5DQ9NZD1 345 aa18.99■□□□□ 0.63
SPG7-205ENST00000561945 DBF4Q9UBU7 674 aaPredicted RBP18.99■□□□□ 0.63
SPG7-205ENST00000561945 TRMT112Q9UI30 125 aaKnown RBP18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms