RNA–Protein interactions for RNA: ENST00000561588.2

AP005233.2-201, humanhuman

TSL 3 BASIC

Gene AP005233.2, Length 372 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP005233.2-201ENST00000561588 GPC2Q8N158 579 aa22.28■■□□□ 1.16
AP005233.2-201ENST00000561588 ZBTB3Q9H5J0 574 aa22.28■■□□□ 1.16
AP005233.2-201ENST00000561588 NTSR2O95665 410 aa22.27■■□□□ 1.16
AP005233.2-201ENST00000561588 ITGBL1O95965 494 aaPredicted RBP22.27■■□□□ 1.16
AP005233.2-201ENST00000561588 RPGRQ92834 1020 aaKnown RBP22.27■■□□□ 1.16
AP005233.2-201ENST00000561588 BABAM1Q9NWV8 329 aa22.27■■□□□ 1.16
AP005233.2-201ENST00000561588 CNTNAP1P78357 1384 aa22.26■■□□□ 1.15
AP005233.2-201ENST00000561588 GPTP24298 496 aa22.26■■□□□ 1.15
AP005233.2-201ENST00000561588 EPHX2P34913 555 aa22.26■■□□□ 1.15
AP005233.2-201ENST00000561588 PNMA8AQ86V59 439 aaPredicted RBP22.26■■□□□ 1.15
AP005233.2-201ENST00000561588 TNS4Q8IZW8 715 aa22.26■■□□□ 1.15
AP005233.2-201ENST00000561588 CRAMP1Q96RY5 1269 aa22.26■■□□□ 1.15
AP005233.2-201ENST00000561588 TSPYL4Q9UJ04 414 aa22.26■■□□□ 1.15
AP005233.2-201ENST00000561588 PDIA6Q15084 440 aa22.25■■□□□ 1.15
AP005233.2-201ENST00000561588 PARP10Q53GL7 1025 aa22.25■■□□□ 1.15
AP005233.2-201ENST00000561588 JDP2Q8WYK2 163 aa22.25■■□□□ 1.15
AP005233.2-201ENST00000561588 MKRN1Q9UHC7 482 aaKnown RBP22.25■■□□□ 1.15
AP005233.2-201ENST00000561588 COL4A5P29400 1685 aa22.24■■□□□ 1.15
AP005233.2-201ENST00000561588 EAPPQ56P03 285 aaPredicted RBP22.24■■□□□ 1.15
AP005233.2-201ENST00000561588 PPP1R42Q7Z4L9 355 aa22.24■■□□□ 1.15
AP005233.2-201ENST00000561588 RBM17Q96I25 401 aaKnown RBP22.24■■□□□ 1.15
AP005233.2-201ENST00000561588 RNF123Q5XPI4 1314 aa22.24■■□□□ 1.15
AP005233.2-201ENST00000561588 TMEM88BA6NKF7 163 aa22.23■■□□□ 1.15
AP005233.2-201ENST00000561588 RALBP1Q15311 655 aa22.23■■□□□ 1.15
AP005233.2-201ENST00000561588 RIPK4P57078 832 aa22.22■■□□□ 1.15
AP005233.2-201ENST00000561588 PPEF1O14829 653 aaPredicted RBP22.21■■□□□ 1.15
AP005233.2-201ENST00000561588 SLC10A5Q5PT55 438 aa22.21■■□□□ 1.15
AP005233.2-201ENST00000561588 C3orf67Q6ZVT6 689 aa22.21■■□□□ 1.15
AP005233.2-201ENST00000561588 TMPOP42166 694 aaKnown RBP22.2■■□□□ 1.14
AP005233.2-201ENST00000561588 EIF6P56537 245 aaKnown RBP22.2■■□□□ 1.14
AP005233.2-201ENST00000561588 LMOD3Q0VAK6 560 aa22.2■■□□□ 1.14
AP005233.2-201ENST00000561588 NLRP3Q96P20 1036 aa22.2■■□□□ 1.14
AP005233.2-201ENST00000561588 CLEC11AQ9Y240 323 aa22.2■■□□□ 1.14
AP005233.2-201ENST00000561588 EIF2S2P20042 333 aaKnown RBP22.19■■□□□ 1.14
AP005233.2-201ENST00000561588 CNTROBQ8N137 903 aa22.19■■□□□ 1.14
AP005233.2-201ENST00000561588 UTP14AQ9BVJ6 771 aaKnown RBP22.19■■□□□ 1.14
AP005233.2-201ENST00000561588 LTBP1Q14766 1721 aa22.19■■□□□ 1.14
AP005233.2-201ENST00000561588 ANKRD36CQ5JPF3 1778 aa22.18■■□□□ 1.14
AP005233.2-201ENST00000561588 PROSER3Q2NL68 480 aa22.18■■□□□ 1.14
AP005233.2-201ENST00000561588 LARGE2Q8N3Y3 721 aa22.18■■□□□ 1.14
AP005233.2-201ENST00000561588 VPS33BQ9H267 617 aa22.18■■□□□ 1.14
AP005233.2-201ENST00000561588 VEGFBP49765 207 aa22.17■■□□□ 1.14
AP005233.2-201ENST00000561588 MAP1SQ66K74 1059 aaPredicted RBP22.17■■□□□ 1.14
AP005233.2-201ENST00000561588 ATP6V0A2Q9Y487 856 aa22.17■■□□□ 1.14
AP005233.2-201ENST00000561588 SCNN1DP51172 638 aa22.16■■□□□ 1.14
AP005233.2-201ENST00000561588 HSP90AB3PQ58FF7 597 aa22.16■■□□□ 1.14
AP005233.2-201ENST00000561588 SLC51AQ86UW1 340 aa22.16■■□□□ 1.14
AP005233.2-201ENST00000561588 GJA3Q9Y6H8 435 aa22.16■■□□□ 1.14
AP005233.2-201ENST00000561588 LAMB2P55268 1798 aa22.15■■□□□ 1.14
AP005233.2-201ENST00000561588 ABCC4O15439 1325 aa22.15■■□□□ 1.14
AP005233.2-201ENST00000561588 RASSF10A6NK89 507 aa22.15■■□□□ 1.14
AP005233.2-201ENST00000561588 ANXA1P04083 346 aa22.15■■□□□ 1.14
AP005233.2-201ENST00000561588 LMOD1P29536 600 aaPredicted RBP22.15■■□□□ 1.14
AP005233.2-201ENST00000561588 FOXN1O15353 648 aa22.14■■□□□ 1.13
AP005233.2-201ENST00000561588 COPS6Q7L5N1 327 aa22.14■■□□□ 1.13
AP005233.2-201ENST00000561588 NIM1KQ8IY84 436 aa22.14■■□□□ 1.13
AP005233.2-201ENST00000561588 RTFDC1Q9BY42 306 aaPredicted RBP22.14■■□□□ 1.13
AP005233.2-201ENST00000561588 TMX4Q9H1E5 349 aaPredicted RBP22.14■■□□□ 1.13
AP005233.2-201ENST00000561588 CHL1O00533 1208 aa22.13■■□□□ 1.13
AP005233.2-201ENST00000561588 TCERG1O14776 1098 aaKnown RBP22.13■■□□□ 1.13
AP005233.2-201ENST00000561588 EPS15P42566 896 aa22.13■■□□□ 1.13
AP005233.2-201ENST00000561588 USP50Q70EL3 339 aaPredicted RBP22.13■■□□□ 1.13
AP005233.2-201ENST00000561588 NLRP10Q86W26 655 aa22.13■■□□□ 1.13
AP005233.2-201ENST00000561588 DDX21Q9NR30 783 aaKnown RBP eCLIP22.13■■□□□ 1.13
AP005233.2-201ENST00000561588 PPIP5K2O43314 1243 aa22.12■■□□□ 1.13
AP005233.2-201ENST00000561588 CAPN15O75808 1086 aa22.12■■□□□ 1.13
AP005233.2-201ENST00000561588 BBOX1O75936 387 aa22.12■■□□□ 1.13
AP005233.2-201ENST00000561588 TCIRG1Q13488 830 aa22.12■■□□□ 1.13
AP005233.2-201ENST00000561588 XAGE3Q8WTP9 111 aa22.12■■□□□ 1.13
AP005233.2-201ENST00000561588 PRDM10Q9NQV6 1147 aa22.12■■□□□ 1.13
AP005233.2-201ENST00000561588 MYBBP1AQ9BQG0 1328 aaKnown RBP22.11■■□□□ 1.13
AP005233.2-201ENST00000561588 AOC3Q16853 763 aa22.11■■□□□ 1.13
AP005233.2-201ENST00000561588 DEFB115Q30KQ5 88 aa22.11■■□□□ 1.13
AP005233.2-201ENST00000561588 SP8Q8IXZ3 490 aa22.11■■□□□ 1.13
AP005233.2-201ENST00000561588 SUPT20HQ8NEM7 779 aa22.11■■□□□ 1.13
AP005233.2-201ENST00000561588 WBP1LQ9NX94 342 aa22.11■■□□□ 1.13
AP005233.2-201ENST00000561588 SH3TC1Q8TE82 1336 aa22.09■■□□□ 1.13
AP005233.2-201ENST00000561588 CTCFP49711 727 aaPredicted RBP22.09■■□□□ 1.13
AP005233.2-201ENST00000561588 AIMP1Q12904 312 aaKnown RBP22.09■■□□□ 1.13
AP005233.2-201ENST00000561588 NECTIN2Q92692 538 aa22.09■■□□□ 1.13
AP005233.2-201ENST00000561588 AIDAQ96BJ3 306 aa22.09■■□□□ 1.13
AP005233.2-201ENST00000561588 ZNRF3Q9ULT6 936 aa22.09■■□□□ 1.13
AP005233.2-201ENST00000561588 TRIM35Q9UPQ4 493 aa22.09■■□□□ 1.13
AP005233.2-201ENST00000561588 HOXB7P09629 217 aa22.08■■□□□ 1.13
AP005233.2-201ENST00000561588 HCLS1P14317 486 aaPredicted RBP22.08■■□□□ 1.13
AP005233.2-201ENST00000561588 KRT24Q2M2I5 525 aa22.08■■□□□ 1.13
AP005233.2-201ENST00000561588 RUNDC1Q96C34 613 aa22.08■■□□□ 1.13
AP005233.2-201ENST00000561588 GPRC5DQ9NZD1 345 aa22.08■■□□□ 1.13
AP005233.2-201ENST00000561588 TRMT112Q9UI30 125 aaKnown RBP22.08■■□□□ 1.13
AP005233.2-201ENST00000561588 TRPM7Q96QT4 1865 aa22.08■■□□□ 1.13
AP005233.2-201ENST00000561588 CXCL9Q07325 125 aa22.07■■□□□ 1.12
AP005233.2-201ENST00000561588 KIAA2012Q0VF49 1180 aa22.07■■□□□ 1.12
AP005233.2-201ENST00000561588 GRAPQ13588 217 aa22.07■■□□□ 1.12
AP005233.2-201ENST00000561588 DPP8Q6V1X1 898 aaPredicted RBP22.07■■□□□ 1.12
AP005233.2-201ENST00000561588 DDX46Q7L014 1031 aaKnown RBP22.07■■□□□ 1.12
AP005233.2-201ENST00000561588 CCDC146Q8IYE0 955 aa22.07■■□□□ 1.12
AP005233.2-201ENST00000561588 GRAPLQ8TC17 118 aaPredicted RBP22.07■■□□□ 1.12
AP005233.2-201ENST00000561588 ADARB2Q9NS39 739 aaKnown RBP22.07■■□□□ 1.12
AP005233.2-201ENST00000561588 WDR33Q9C0J8 1336 aaKnown RBP22.06■■□□□ 1.12
AP005233.2-201ENST00000561588 THSD7BQ9C0I4 1608 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms