RNA–Protein interactions for RNA: ENST00000561514.1

PALB2-202, Transcript of partner and localizer of BRCA2, humanhuman

TSL 5

Gene PALB2, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-202ENST00000561514 NTSR2O95665 410 aa11.11□□□□□ -0.63
PALB2-202ENST00000561514 BABAM1Q9NWV8 329 aa11.11□□□□□ -0.63
PALB2-202ENST00000561514 COL4A5P29400 1685 aa11.11□□□□□ -0.63
PALB2-202ENST00000561514 SCN4AP35499 1836 aa11.1□□□□□ -0.63
PALB2-202ENST00000561514 GIGYF2Q6Y7W6 1299 aaKnown RBP11.1□□□□□ -0.63
PALB2-202ENST00000561514 GPC2Q8N158 579 aa11.1□□□□□ -0.63
PALB2-202ENST00000561514 SYNE4Q8N205 404 aa11.1□□□□□ -0.63
PALB2-202ENST00000561514 CRAMP1Q96RY5 1269 aa11.1□□□□□ -0.63
PALB2-202ENST00000561514 THUMPD2Q9BTF0 503 aaKnown RBP11.1□□□□□ -0.63
PALB2-202ENST00000561514 PNNQ9H307 717 aaKnown RBP11.1□□□□□ -0.63
PALB2-202ENST00000561514 HACL1Q9UJ83 578 aa11.1□□□□□ -0.63
PALB2-202ENST00000561514 RNF123Q5XPI4 1314 aa11.09□□□□□ -0.63
PALB2-202ENST00000561514 CCDC88AQ3V6T2 1871 aa11.09□□□□□ -0.63
PALB2-202ENST00000561514 NEFMP07197 916 aa11.09□□□□□ -0.63
PALB2-202ENST00000561514 EPHX2P34913 555 aa11.09□□□□□ -0.63
PALB2-202ENST00000561514 PDIA6Q15084 440 aa11.09□□□□□ -0.63
PALB2-202ENST00000561514 PARP10Q53GL7 1025 aa11.09□□□□□ -0.63
PALB2-202ENST00000561514 SUSD4Q5VX71 490 aa11.09□□□□□ -0.63
PALB2-202ENST00000561514 KIF6Q6ZMV9 814 aa11.09□□□□□ -0.63
PALB2-202ENST00000561514 PNMA8AQ86V59 439 aaPredicted RBP11.09□□□□□ -0.63
PALB2-202ENST00000561514 NUTM1Q86Y26 1132 aa11.09□□□□□ -0.63
PALB2-202ENST00000561514 FAM177BA6PVY3 158 aa11.08□□□□□ -0.64
PALB2-202ENST00000561514 SLC10A5Q5PT55 438 aa11.08□□□□□ -0.64
PALB2-202ENST00000561514 TNS4Q8IZW8 715 aa11.08□□□□□ -0.64
PALB2-202ENST00000561514 RRP7AQ9Y3A4 280 aaKnown RBP11.08□□□□□ -0.64
PALB2-202ENST00000561514 MAPK8IP3Q9UPT6 1336 aa11.08□□□□□ -0.64
PALB2-202ENST00000561514 RASSF10A6NK89 507 aa11.07□□□□□ -0.64
PALB2-202ENST00000561514 TMEM88BA6NKF7 163 aa11.07□□□□□ -0.64
PALB2-202ENST00000561514 GTF2E1P29083 439 aaPredicted RBP11.07□□□□□ -0.64
PALB2-202ENST00000561514 C3orf67Q6ZVT6 689 aa11.07□□□□□ -0.64
PALB2-202ENST00000561514 VPS33BQ9H267 617 aa11.07□□□□□ -0.64
PALB2-202ENST00000561514 ZBTB3Q9H5J0 574 aa11.07□□□□□ -0.64
PALB2-202ENST00000561514 MKRN1Q9UHC7 482 aaKnown RBP11.07□□□□□ -0.64
PALB2-202ENST00000561514 PPEF1O14829 653 aaPredicted RBP11.06□□□□□ -0.64
PALB2-202ENST00000561514 MYL6BP14649 208 aa11.06□□□□□ -0.64
PALB2-202ENST00000561514 GPTP24298 496 aa11.06□□□□□ -0.64
PALB2-202ENST00000561514 SCNN1DP51172 638 aa11.06□□□□□ -0.64
PALB2-202ENST00000561514 RALBP1Q15311 655 aa11.06□□□□□ -0.64
PALB2-202ENST00000561514 JDP2Q8WYK2 163 aa11.06□□□□□ -0.64
PALB2-202ENST00000561514 RPGRQ92834 1020 aaKnown RBP11.06□□□□□ -0.64
PALB2-202ENST00000561514 RBM17Q96I25 401 aaKnown RBP11.06□□□□□ -0.64
PALB2-202ENST00000561514 RTFDC1Q9BY42 306 aaPredicted RBP11.06□□□□□ -0.64
PALB2-202ENST00000561514 PRDM10Q9NQV6 1147 aa11.06□□□□□ -0.64
PALB2-202ENST00000561514 TSPYL4Q9UJ04 414 aa11.06□□□□□ -0.64
PALB2-202ENST00000561514 VEGFBP49765 207 aa11.05□□□□□ -0.64
PALB2-202ENST00000561514 LMOD3Q0VAK6 560 aa11.05□□□□□ -0.64
PALB2-202ENST00000561514 PROSER3Q2NL68 480 aa11.05□□□□□ -0.64
PALB2-202ENST00000561514 PPP1R42Q7Z4L9 355 aa11.05□□□□□ -0.64
PALB2-202ENST00000561514 SLC51AQ86UW1 340 aa11.05□□□□□ -0.64
PALB2-202ENST00000561514 CNTROBQ8N137 903 aa11.05□□□□□ -0.64
PALB2-202ENST00000561514 NGEFQ8N5V2 710 aa11.05□□□□□ -0.64
PALB2-202ENST00000561514 WBP1LQ9NX94 342 aa11.05□□□□□ -0.64
PALB2-202ENST00000561514 ATP6V0A2Q9Y487 856 aa11.05□□□□□ -0.64
PALB2-202ENST00000561514 LTBP1Q14766 1721 aa11.04□□□□□ -0.64
PALB2-202ENST00000561514 DLG5Q8TDM6 1919 aa11.04□□□□□ -0.64
PALB2-202ENST00000561514 FOXN1O15353 648 aa11.04□□□□□ -0.64
PALB2-202ENST00000561514 TMPOP42166 694 aaKnown RBP11.04□□□□□ -0.64
PALB2-202ENST00000561514 EIF6P56537 245 aaKnown RBP11.04□□□□□ -0.64
PALB2-202ENST00000561514 RIPK4P57078 832 aa11.04□□□□□ -0.64
PALB2-202ENST00000561514 EAPPQ56P03 285 aaPredicted RBP11.04□□□□□ -0.64
PALB2-202ENST00000561514 MAP1SQ66K74 1059 aaPredicted RBP11.04□□□□□ -0.64
PALB2-202ENST00000561514 UTP14AQ9BVJ6 771 aaKnown RBP11.04□□□□□ -0.64
PALB2-202ENST00000561514 ABCC4O15439 1325 aa11.04□□□□□ -0.64
PALB2-202ENST00000561514 CDHR2Q9BYE9 1310 aa11.04□□□□□ -0.64
PALB2-202ENST00000561514 CACNA1SQ13698 1873 aa11.04□□□□□ -0.64
PALB2-202ENST00000561514 THSD7BQ9C0I4 1608 aa11.03□□□□□ -0.64
PALB2-202ENST00000561514 NUP98P52948 1817 aa11.03□□□□□ -0.64
PALB2-202ENST00000561514 CHL1O00533 1208 aa11.03□□□□□ -0.64
PALB2-202ENST00000561514 HOXB7P09629 217 aa11.03□□□□□ -0.64
PALB2-202ENST00000561514 HSP90AB3PQ58FF7 597 aa11.03□□□□□ -0.64
PALB2-202ENST00000561514 USP50Q70EL3 339 aaPredicted RBP11.03□□□□□ -0.64
PALB2-202ENST00000561514 NLRP10Q86W26 655 aa11.03□□□□□ -0.64
PALB2-202ENST00000561514 LARGE2Q8N3Y3 721 aa11.03□□□□□ -0.64
PALB2-202ENST00000561514 NLRP3Q96P20 1036 aa11.03□□□□□ -0.64
PALB2-202ENST00000561514 DDX21Q9NR30 783 aaKnown RBP eCLIP11.03□□□□□ -0.64
PALB2-202ENST00000561514 BBOX1O75936 387 aa11.02□□□□□ -0.65
PALB2-202ENST00000561514 EPS15P42566 896 aa11.02□□□□□ -0.65
PALB2-202ENST00000561514 PPIP5K2O43314 1243 aa11.01□□□□□ -0.65
PALB2-202ENST00000561514 ANXA1P04083 346 aa11.01□□□□□ -0.65
PALB2-202ENST00000561514 LMOD1P29536 600 aaPredicted RBP11.01□□□□□ -0.65
PALB2-202ENST00000561514 CTCFP49711 727 aaPredicted RBP11.01□□□□□ -0.65
PALB2-202ENST00000561514 KIAA2012Q0VF49 1180 aa11.01□□□□□ -0.65
PALB2-202ENST00000561514 TCIRG1Q13488 830 aa11.01□□□□□ -0.65
PALB2-202ENST00000561514 COPS6Q7L5N1 327 aa11.01□□□□□ -0.65
PALB2-202ENST00000561514 TMC4Q7Z404 712 aa11.01□□□□□ -0.65
PALB2-202ENST00000561514 SP8Q8IXZ3 490 aa11.01□□□□□ -0.65
PALB2-202ENST00000561514 NIM1KQ8IY84 436 aa11.01□□□□□ -0.65
PALB2-202ENST00000561514 SUPT20HQ8NEM7 779 aa11.01□□□□□ -0.65
PALB2-202ENST00000561514 XAGE3Q8WTP9 111 aa11.01□□□□□ -0.65
PALB2-202ENST00000561514 GPRC5DQ9NZD1 345 aa11.01□□□□□ -0.65
PALB2-202ENST00000561514 PGAP2Q9UHJ9 254 aa11.01□□□□□ -0.65
PALB2-202ENST00000561514 CLEC11AQ9Y240 323 aa11.01□□□□□ -0.65
PALB2-202ENST00000561514 U3KPZ7 1027 aaPredicted RBP11.01□□□□□ -0.65
PALB2-202ENST00000561514 MYBBP1AQ9BQG0 1328 aaKnown RBP11.01□□□□□ -0.65
PALB2-202ENST00000561514 DUOX1Q9NRD9 1551 aa11□□□□□ -0.65
PALB2-202ENST00000561514 EIF2S2P20042 333 aaKnown RBP11□□□□□ -0.65
PALB2-202ENST00000561514 CXCL9Q07325 125 aa11□□□□□ -0.65
PALB2-202ENST00000561514 GRAPQ13588 217 aa11□□□□□ -0.65
PALB2-202ENST00000561514 AOC3Q16853 763 aa11□□□□□ -0.65
PALB2-202ENST00000561514 DEFB115Q30KQ5 88 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms