RNA–Protein interactions for RNA: ENST00000561423.2

PRKXP1-201, Transcript of PRKX pseudogene 1, humanhuman

BASIC

Gene PRKXP1, Length 1,122 nt, Biotype processed pseudogene, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKXP1-201ENST00000561423 SUSD4Q5VX71 490 aa18.72■□□□□ 0.59
PRKXP1-201ENST00000561423 HOXA10P31260 410 aaPredicted RBP18.71■□□□□ 0.59
PRKXP1-201ENST00000561423 CLEC11AQ9Y240 323 aa18.71■□□□□ 0.59
PRKXP1-201ENST00000561423 DLG5Q8TDM6 1919 aa18.7■□□□□ 0.58
PRKXP1-201ENST00000561423 TMEM88BA6NKF7 163 aa18.7■□□□□ 0.58
PRKXP1-201ENST00000561423 NTSR2O95665 410 aa18.7■□□□□ 0.58
PRKXP1-201ENST00000561423 C3orf67Q6ZVT6 689 aa18.7■□□□□ 0.58
PRKXP1-201ENST00000561423 ZNF34Q8IZ26 560 aa18.7■□□□□ 0.58
PRKXP1-201ENST00000561423 GPC2Q8N158 579 aa18.7■□□□□ 0.58
PRKXP1-201ENST00000561423 RPGRQ92834 1020 aaKnown RBP18.7■□□□□ 0.58
PRKXP1-201ENST00000561423 FOXN1O15353 648 aa18.69■□□□□ 0.58
PRKXP1-201ENST00000561423 VEGFBP49765 207 aa18.69■□□□□ 0.58
PRKXP1-201ENST00000561423 MAP1SQ66K74 1059 aaPredicted RBP18.69■□□□□ 0.58
PRKXP1-201ENST00000561423 CC2D2BQ6DHV5 1058 aa18.69■□□□□ 0.58
PRKXP1-201ENST00000561423 GIGYF2Q6Y7W6 1299 aaKnown RBP18.69■□□□□ 0.58
PRKXP1-201ENST00000561423 LRP10Q7Z4F1 713 aa18.69■□□□□ 0.58
PRKXP1-201ENST00000561423 PNMA8AQ86V59 439 aaPredicted RBP18.69■□□□□ 0.58
PRKXP1-201ENST00000561423 JDP2Q8WYK2 163 aa18.69■□□□□ 0.58
PRKXP1-201ENST00000561423 ERBB4Q15303 1308 aa18.69■□□□□ 0.58
PRKXP1-201ENST00000561423 MAPK8IP3Q9UPT6 1336 aa18.69■□□□□ 0.58
PRKXP1-201ENST00000561423 PPEF1O14829 653 aaPredicted RBP18.67■□□□□ 0.58
PRKXP1-201ENST00000561423 PDIA6Q15084 440 aa18.67■□□□□ 0.58
PRKXP1-201ENST00000561423 CNTROBQ8N137 903 aa18.67■□□□□ 0.58
PRKXP1-201ENST00000561423 CRAMP1Q96RY5 1269 aa18.67■□□□□ 0.58
PRKXP1-201ENST00000561423 TSPYL4Q9UJ04 414 aa18.67■□□□□ 0.58
PRKXP1-201ENST00000561423 GJA3Q9Y6H8 435 aa18.67■□□□□ 0.58
PRKXP1-201ENST00000561423 NUP98P52948 1817 aa18.67■□□□□ 0.58
PRKXP1-201ENST00000561423 TCERG1O14776 1098 aaKnown RBP18.66■□□□□ 0.58
PRKXP1-201ENST00000561423 EIF6P56537 245 aaKnown RBP18.66■□□□□ 0.58
PRKXP1-201ENST00000561423 RBM17Q96I25 401 aaKnown RBP18.66■□□□□ 0.58
PRKXP1-201ENST00000561423 LTBP1Q14766 1721 aa18.66■□□□□ 0.58
PRKXP1-201ENST00000561423 ANXA1P04083 346 aa18.65■□□□□ 0.58
PRKXP1-201ENST00000561423 SCNN1DP51172 638 aa18.65■□□□□ 0.58
PRKXP1-201ENST00000561423 PROSER3Q2NL68 480 aa18.65■□□□□ 0.58
PRKXP1-201ENST00000561423 LARGE2Q8N3Y3 721 aa18.65■□□□□ 0.58
PRKXP1-201ENST00000561423 PNNQ9H307 717 aaKnown RBP18.65■□□□□ 0.58
PRKXP1-201ENST00000561423 RASSF10A6NK89 507 aa18.64■□□□□ 0.57
PRKXP1-201ENST00000561423 EIF2S2P20042 333 aaKnown RBP18.64■□□□□ 0.57
PRKXP1-201ENST00000561423 PARP10Q53GL7 1025 aa18.64■□□□□ 0.57
PRKXP1-201ENST00000561423 PPP1R42Q7Z4L9 355 aa18.64■□□□□ 0.57
PRKXP1-201ENST00000561423 EPS15P42566 896 aa18.63■□□□□ 0.57
PRKXP1-201ENST00000561423 GRIPAP1Q4V328 841 aa18.63■□□□□ 0.57
PRKXP1-201ENST00000561423 LMOD1P29536 600 aaPredicted RBP18.62■□□□□ 0.57
PRKXP1-201ENST00000561423 RIPK4P57078 832 aa18.62■□□□□ 0.57
PRKXP1-201ENST00000561423 FMR1Q06787 632 aaKnown RBP eCLIP18.62■□□□□ 0.57
PRKXP1-201ENST00000561423 NLRP3Q96P20 1036 aa18.62■□□□□ 0.57
PRKXP1-201ENST00000561423 UTP14AQ9BVJ6 771 aaKnown RBP18.62■□□□□ 0.57
PRKXP1-201ENST00000561423 PRDM10Q9NQV6 1147 aa18.62■□□□□ 0.57
PRKXP1-201ENST00000561423 WBP1LQ9NX94 342 aa18.62■□□□□ 0.57
PRKXP1-201ENST00000561423 ABCC4O15439 1325 aa18.61■□□□□ 0.57
PRKXP1-201ENST00000561423 PPIP5K2O43314 1243 aa18.61■□□□□ 0.57
PRKXP1-201ENST00000561423 CTCFP49711 727 aaPredicted RBP18.61■□□□□ 0.57
PRKXP1-201ENST00000561423 AOC3Q16853 763 aa18.61■□□□□ 0.57
PRKXP1-201ENST00000561423 DEFB115Q30KQ5 88 aa18.61■□□□□ 0.57
PRKXP1-201ENST00000561423 SLC10A5Q5PT55 438 aa18.61■□□□□ 0.57
PRKXP1-201ENST00000561423 NIM1KQ8IY84 436 aa18.61■□□□□ 0.57
PRKXP1-201ENST00000561423 AIDAQ96BJ3 306 aa18.61■□□□□ 0.57
PRKXP1-201ENST00000561423 DDX21Q9NR30 783 aaKnown RBP eCLIP18.61■□□□□ 0.57
PRKXP1-201ENST00000561423 ATP6V0A2Q9Y487 856 aa18.61■□□□□ 0.57
PRKXP1-201ENST00000561423 ABT1Q9ULW3 272 aaKnown RBP18.6■□□□□ 0.57
PRKXP1-201ENST00000561423 TMPOP42166 694 aaKnown RBP18.59■□□□□ 0.57
PRKXP1-201ENST00000561423 NECTIN2Q92692 538 aa18.59■□□□□ 0.57
PRKXP1-201ENST00000561423 BABAM1Q9NWV8 329 aa18.59■□□□□ 0.57
PRKXP1-201ENST00000561423 WDR33Q9C0J8 1336 aaKnown RBP18.58■□□□□ 0.57
PRKXP1-201ENST00000561423 USP50Q70EL3 339 aaPredicted RBP18.58■□□□□ 0.56
PRKXP1-201ENST00000561423 COPS6Q7L5N1 327 aa18.58■□□□□ 0.56
PRKXP1-201ENST00000561423 NLRP10Q86W26 655 aa18.58■□□□□ 0.56
PRKXP1-201ENST00000561423 XAGE3Q8WTP9 111 aa18.58■□□□□ 0.56
PRKXP1-201ENST00000561423 TRAF5O00463 557 aa18.57■□□□□ 0.56
PRKXP1-201ENST00000561423 HCLS1P14317 486 aaPredicted RBP18.57■□□□□ 0.56
PRKXP1-201ENST00000561423 LBX1P52954 281 aa18.57■□□□□ 0.56
PRKXP1-201ENST00000561423 AIMP1Q12904 312 aaKnown RBP18.57■□□□□ 0.56
PRKXP1-201ENST00000561423 KRT24Q2M2I5 525 aa18.57■□□□□ 0.56
PRKXP1-201ENST00000561423 RTFDC1Q9BY42 306 aaPredicted RBP18.57■□□□□ 0.56
PRKXP1-201ENST00000561423 HSPA8P11142 646 aaKnown RBP18.56■□□□□ 0.56
PRKXP1-201ENST00000561423 CXCL9Q07325 125 aa18.56■□□□□ 0.56
PRKXP1-201ENST00000561423 LMOD3Q0VAK6 560 aa18.56■□□□□ 0.56
PRKXP1-201ENST00000561423 HSP90AB3PQ58FF7 597 aa18.56■□□□□ 0.56
PRKXP1-201ENST00000561423 TMX4Q9H1E5 349 aaPredicted RBP18.56■□□□□ 0.56
PRKXP1-201ENST00000561423 VPS33BQ9H267 617 aa18.56■□□□□ 0.56
PRKXP1-201ENST00000561423 GPRC5DQ9NZD1 345 aa18.56■□□□□ 0.56
PRKXP1-201ENST00000561423 TCIRG1Q13488 830 aa18.55■□□□□ 0.56
PRKXP1-201ENST00000561423 RALBP1Q15311 655 aa18.55■□□□□ 0.56
PRKXP1-201ENST00000561423 SUPT20HQ8NEM7 779 aa18.55■□□□□ 0.56
PRKXP1-201ENST00000561423 ADARB2Q9NS39 739 aaKnown RBP18.55■□□□□ 0.56
PRKXP1-201ENST00000561423 ZNRF3Q9ULT6 936 aa18.55■□□□□ 0.56
PRKXP1-201ENST00000561423 BBOX1O75936 387 aa18.54■□□□□ 0.56
PRKXP1-201ENST00000561423 CST9Q5W186 159 aa18.54■□□□□ 0.56
PRKXP1-201ENST00000561423 DPP8Q6V1X1 898 aaPredicted RBP18.54■□□□□ 0.56
PRKXP1-201ENST00000561423 SP8Q8IXZ3 490 aa18.54■□□□□ 0.56
PRKXP1-201ENST00000561423 CCDC146Q8IYE0 955 aa18.54■□□□□ 0.56
PRKXP1-201ENST00000561423 TRMT112Q9UI30 125 aaKnown RBP18.54■□□□□ 0.56
PRKXP1-201ENST00000561423 SH3TC1Q8TE82 1336 aa18.53■□□□□ 0.56
PRKXP1-201ENST00000561423 THSD7BQ9C0I4 1608 aa18.53■□□□□ 0.56
PRKXP1-201ENST00000561423 CHL1O00533 1208 aa18.53■□□□□ 0.56
PRKXP1-201ENST00000561423 GMPSP49915 693 aaPredicted RBP18.53■□□□□ 0.56
PRKXP1-201ENST00000561423 MAP2K1Q02750 393 aaPredicted RBP18.53■□□□□ 0.56
PRKXP1-201ENST00000561423 KIAA2012Q0VF49 1180 aa18.53■□□□□ 0.56
PRKXP1-201ENST00000561423 GRAPQ13588 217 aa18.53■□□□□ 0.56
PRKXP1-201ENST00000561423 NEUROD2Q15784 382 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms