RNA–Protein interactions for RNA: ENST00000561000.1

LINC01220-202, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 5

Gene LINC01220, Length 159 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-202ENST00000561000 RBM17Q96I25 401 aaKnown RBP24.4■■□□□ 1.5
LINC01220-202ENST00000561000 HOXA10P31260 410 aaPredicted RBP24.39■■□□□ 1.49
LINC01220-202ENST00000561000 IARSP41252 1262 aaKnown RBP24.39■■□□□ 1.49
LINC01220-202ENST00000561000 XAGE3Q8WTP9 111 aa24.39■■□□□ 1.49
LINC01220-202ENST00000561000 UTP14AQ9BVJ6 771 aaKnown RBP24.39■■□□□ 1.49
LINC01220-202ENST00000561000 IBTKQ9P2D0 1353 aaPredicted RBP24.39■■□□□ 1.49
LINC01220-202ENST00000561000 POTEIP0CG38 1075 aa24.38■■□□□ 1.49
LINC01220-202ENST00000561000 POTEJP0CG39 1038 aa24.38■■□□□ 1.49
LINC01220-202ENST00000561000 IFFO2Q5TF58 517 aa24.38■■□□□ 1.49
LINC01220-202ENST00000561000 C3orf67Q6ZVT6 689 aa24.38■■□□□ 1.49
LINC01220-202ENST00000561000 NLRP3Q96P20 1036 aa24.38■■□□□ 1.49
LINC01220-202ENST00000561000 PRKRIP1Q9H875 184 aaPredicted RBP24.38■■□□□ 1.49
LINC01220-202ENST00000561000 CACNA1SQ13698 1873 aa24.38■■□□□ 1.49
LINC01220-202ENST00000561000 WDR90Q96KV7 1748 aa24.38■■□□□ 1.49
LINC01220-202ENST00000561000 IQCA1LA6NCM1 817 aa24.37■■□□□ 1.49
LINC01220-202ENST00000561000 CC2D2BQ6DHV5 1058 aa24.37■■□□□ 1.49
LINC01220-202ENST00000561000 CHADLQ6NUI6 762 aa24.37■■□□□ 1.49
LINC01220-202ENST00000561000 CRAMP1Q96RY5 1269 aa24.37■■□□□ 1.49
LINC01220-202ENST00000561000 ZNF541Q9H0D2 1346 aa24.36■■□□□ 1.49
LINC01220-202ENST00000561000 PSMD1Q99460 953 aa24.36■■□□□ 1.49
LINC01220-202ENST00000561000 DDX21Q9NR30 783 aaKnown RBP eCLIP24.36■■□□□ 1.49
LINC01220-202ENST00000561000 ARFGEF2Q9Y6D5 1785 aa24.35■■□□□ 1.49
LINC01220-202ENST00000561000 HSP90AB3PQ58FF7 597 aa24.35■■□□□ 1.49
LINC01220-202ENST00000561000 JDP2Q8WYK2 163 aa24.35■■□□□ 1.49
LINC01220-202ENST00000561000 L3MBTL3Q96JM7 780 aaPredicted RBP24.35■■□□□ 1.49
LINC01220-202ENST00000561000 NUP98P52948 1817 aa24.34■■□□□ 1.49
LINC01220-202ENST00000561000 PPEF1O14829 653 aaPredicted RBP24.34■■□□□ 1.49
LINC01220-202ENST00000561000 SLC10A5Q5PT55 438 aa24.34■■□□□ 1.49
LINC01220-202ENST00000561000 JMYQ8N9B5 988 aa24.34■■□□□ 1.49
LINC01220-202ENST00000561000 TAF1DQ9H5J8 278 aaPredicted RBP24.34■■□□□ 1.49
LINC01220-202ENST00000561000 CHPF2Q9P2E5 772 aa24.34■■□□□ 1.49
LINC01220-202ENST00000561000 RIC1Q4ADV7 1423 aa24.34■■□□□ 1.49
LINC01220-202ENST00000561000 DICER1Q9UPY3 1922 aaKnown RBP24.33■■□□□ 1.49
LINC01220-202ENST00000561000 FZD9O00144 591 aa24.33■■□□□ 1.49
LINC01220-202ENST00000561000 HDGFL1Q5TGJ6 251 aa24.33■■□□□ 1.49
LINC01220-202ENST00000561000 SLC51AQ86UW1 340 aa24.33■■□□□ 1.49
LINC01220-202ENST00000561000 TCIRG1Q13488 830 aa24.32■■□□□ 1.48
LINC01220-202ENST00000561000 EAPPQ56P03 285 aaPredicted RBP24.32■■□□□ 1.48
LINC01220-202ENST00000561000 NLRP10Q86W26 655 aa24.32■■□□□ 1.48
LINC01220-202ENST00000561000 TMX4Q9H1E5 349 aaPredicted RBP24.32■■□□□ 1.48
LINC01220-202ENST00000561000 HCLS1P14317 486 aaPredicted RBP24.31■■□□□ 1.48
LINC01220-202ENST00000561000 GRIPAP1Q4V328 841 aa24.31■■□□□ 1.48
LINC01220-202ENST00000561000 ZNF428Q96B54 188 aa24.31■■□□□ 1.48
LINC01220-202ENST00000561000 CFAP44Q96MT7 982 aa24.31■■□□□ 1.48
LINC01220-202ENST00000561000 TRMT112Q9UI30 125 aaKnown RBP24.31■■□□□ 1.48
LINC01220-202ENST00000561000 HACL1Q9UJ83 578 aa24.31■■□□□ 1.48
LINC01220-202ENST00000561000 EIF6P56537 245 aaKnown RBP24.3■■□□□ 1.48
LINC01220-202ENST00000561000 LDHDQ86WU2 507 aa24.3■■□□□ 1.48
LINC01220-202ENST00000561000 LARGE2Q8N3Y3 721 aa24.3■■□□□ 1.48
LINC01220-202ENST00000561000 CLEC11AQ9Y240 323 aa24.3■■□□□ 1.48
LINC01220-202ENST00000561000 APAF1O14727 1248 aa24.29■■□□□ 1.48
LINC01220-202ENST00000561000 DUSP27Q5VZP5 1158 aa24.29■■□□□ 1.48
LINC01220-202ENST00000561000 GJA3Q9Y6H8 435 aa24.29■■□□□ 1.48
LINC01220-202ENST00000561000 SNED1Q8TER0 1413 aa24.28■■□□□ 1.48
LINC01220-202ENST00000561000 HOXB7P09629 217 aa24.28■■□□□ 1.48
LINC01220-202ENST00000561000 EPHX2P34913 555 aa24.28■■□□□ 1.48
LINC01220-202ENST00000561000 GPC2Q8N158 579 aa24.28■■□□□ 1.48
LINC01220-202ENST00000561000 MBIPQ9NS73 344 aa24.28■■□□□ 1.48
LINC01220-202ENST00000561000 DBF4Q9UBU7 674 aaPredicted RBP24.28■■□□□ 1.48
LINC01220-202ENST00000561000 RNF123Q5XPI4 1314 aa24.28■■□□□ 1.48
LINC01220-202ENST00000561000 ANKRD13DQ6ZTN6 518 aa24.27■■□□□ 1.48
LINC01220-202ENST00000561000 PLBD2Q8NHP8 589 aa24.27■■□□□ 1.48
LINC01220-202ENST00000561000 ATP6V0A2Q9Y487 856 aa24.27■■□□□ 1.48
LINC01220-202ENST00000561000 ABCC4O15439 1325 aa24.27■■□□□ 1.48
LINC01220-202ENST00000561000 SH3TC1Q8TE82 1336 aa24.26■■□□□ 1.47
LINC01220-202ENST00000561000 PPIP5K2O43314 1243 aa24.25■■□□□ 1.47
LINC01220-202ENST00000561000 BBOX1O75936 387 aa24.25■■□□□ 1.47
LINC01220-202ENST00000561000 DDX46Q7L014 1031 aaKnown RBP24.25■■□□□ 1.47
LINC01220-202ENST00000561000 CREBZFQ9NS37 354 aa24.25■■□□□ 1.47
LINC01220-202ENST00000561000 PNMA8AQ86V59 439 aaPredicted RBP24.24■■□□□ 1.47
LINC01220-202ENST00000561000 NIM1KQ8IY84 436 aa24.24■■□□□ 1.47
LINC01220-202ENST00000561000 HYPKQ9NX55 129 aa24.24■■□□□ 1.47
LINC01220-202ENST00000561000 ATP5J2-PTCD1G3V325 749 aa24.23■■□□□ 1.47
LINC01220-202ENST00000561000 ELL2O00472 640 aaPredicted RBP24.23■■□□□ 1.47
LINC01220-202ENST00000561000 ZNF853P0CG23 659 aa24.23■■□□□ 1.47
LINC01220-202ENST00000561000 AOC3Q16853 763 aa24.23■■□□□ 1.47
LINC01220-202ENST00000561000 MKRN1Q9UHC7 482 aaKnown RBP24.23■■□□□ 1.47
LINC01220-202ENST00000561000 LMOD1P29536 600 aaPredicted RBP24.22■■□□□ 1.47
LINC01220-202ENST00000561000 GNAI1P63096 354 aa24.22■■□□□ 1.47
LINC01220-202ENST00000561000 CALD1Q05682 793 aaKnown RBP24.22■■□□□ 1.47
LINC01220-202ENST00000561000 SP8Q8IXZ3 490 aa24.22■■□□□ 1.47
LINC01220-202ENST00000561000 FAM89AQ96GI7 184 aa24.22■■□□□ 1.47
LINC01220-202ENST00000561000 IFT57Q9NWB7 429 aa24.22■■□□□ 1.47
LINC01220-202ENST00000561000 PASKQ96RG2 1323 aa24.21■■□□□ 1.47
LINC01220-202ENST00000561000 GRAPQ13588 217 aa24.21■■□□□ 1.47
LINC01220-202ENST00000561000 DPP8Q6V1X1 898 aaPredicted RBP24.21■■□□□ 1.47
LINC01220-202ENST00000561000 MPNDQ8N594 471 aa24.21■■□□□ 1.47
LINC01220-202ENST00000561000 SUPT20HQ8NEM7 779 aa24.21■■□□□ 1.47
LINC01220-202ENST00000561000 GRAPLQ8TC17 118 aaPredicted RBP24.21■■□□□ 1.47
LINC01220-202ENST00000561000 ISCA1Q9BUE6 129 aa24.21■■□□□ 1.47
LINC01220-202ENST00000561000 ITGBL1O95965 494 aaPredicted RBP24.2■■□□□ 1.46
LINC01220-202ENST00000561000 RTL5Q5HYW3 569 aaPredicted RBP24.2■■□□□ 1.46
LINC01220-202ENST00000561000 MAP1SQ66K74 1059 aaPredicted RBP24.2■■□□□ 1.46
LINC01220-202ENST00000561000 COL4A5P29400 1685 aa24.2■■□□□ 1.46
LINC01220-202ENST00000561000 EPS15P42566 896 aa24.19■■□□□ 1.46
LINC01220-202ENST00000561000 RIC3Q7Z5B4 369 aa24.19■■□□□ 1.46
LINC01220-202ENST00000561000 CNTROBQ8N137 903 aa24.19■■□□□ 1.46
LINC01220-202ENST00000561000 VPS33BQ9H267 617 aa24.19■■□□□ 1.46
LINC01220-202ENST00000561000 HSPA1AP0DMV8 641 aaKnown RBP24.18■■□□□ 1.46
LINC01220-202ENST00000561000 HSPA1BP0DMV9 641 aaKnown RBP24.18■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms