RNA–Protein interactions for RNA: ENST00000560761.5

CPNE6-216, Transcript of copine 6, humanhuman

TSL 5

Gene CPNE6, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-216ENST00000560761 ZNF34Q8IZ26 560 aa23.29■■□□□ 1.32
CPNE6-216ENST00000560761 SNED1Q8TER0 1413 aa23.29■■□□□ 1.32
CPNE6-216ENST00000560761 HACL1Q9UJ83 578 aa23.29■■□□□ 1.32
CPNE6-216ENST00000560761 CLEC11AQ9Y240 323 aa23.29■■□□□ 1.32
CPNE6-216ENST00000560761 RNF123Q5XPI4 1314 aa23.29■■□□□ 1.32
CPNE6-216ENST00000560761 EPHX2P34913 555 aa23.28■■□□□ 1.32
CPNE6-216ENST00000560761 RPGRQ92834 1020 aaKnown RBP23.28■■□□□ 1.32
CPNE6-216ENST00000560761 MAPK8IP3Q9UPT6 1336 aa23.28■■□□□ 1.32
CPNE6-216ENST00000560761 NTSR2O95665 410 aa23.27■■□□□ 1.32
CPNE6-216ENST00000560761 ANXA1P04083 346 aa23.27■■□□□ 1.32
CPNE6-216ENST00000560761 EIF2S2P20042 333 aaKnown RBP23.27■■□□□ 1.32
CPNE6-216ENST00000560761 HOXA10P31260 410 aaPredicted RBP23.27■■□□□ 1.32
CPNE6-216ENST00000560761 PDIA6Q15084 440 aa23.27■■□□□ 1.32
CPNE6-216ENST00000560761 PSMD1Q99460 953 aa23.27■■□□□ 1.32
CPNE6-216ENST00000560761 TSPYL4Q9UJ04 414 aa23.27■■□□□ 1.32
CPNE6-216ENST00000560761 NUP98P52948 1817 aa23.26■■□□□ 1.31
CPNE6-216ENST00000560761 COL4A5P29400 1685 aa23.26■■□□□ 1.31
CPNE6-216ENST00000560761 PROSER3Q2NL68 480 aa23.26■■□□□ 1.31
CPNE6-216ENST00000560761 GIGYF2Q6Y7W6 1299 aaKnown RBP23.26■■□□□ 1.31
CPNE6-216ENST00000560761 LRP10Q7Z4F1 713 aa23.26■■□□□ 1.31
CPNE6-216ENST00000560761 RIPK4P57078 832 aa23.25■■□□□ 1.31
CPNE6-216ENST00000560761 MAP1SQ66K74 1059 aaPredicted RBP23.25■■□□□ 1.31
CPNE6-216ENST00000560761 GJA3Q9Y6H8 435 aa23.25■■□□□ 1.31
CPNE6-216ENST00000560761 GPC2Q8N158 579 aa23.24■■□□□ 1.31
CPNE6-216ENST00000560761 JDP2Q8WYK2 163 aa23.24■■□□□ 1.31
CPNE6-216ENST00000560761 NECTIN2Q92692 538 aa23.24■■□□□ 1.31
CPNE6-216ENST00000560761 PNNQ9H307 717 aaKnown RBP23.24■■□□□ 1.31
CPNE6-216ENST00000560761 CNTNAP1P78357 1384 aa23.24■■□□□ 1.31
CPNE6-216ENST00000560761 SCN4AP35499 1836 aa23.24■■□□□ 1.31
CPNE6-216ENST00000560761 VEGFBP49765 207 aa23.23■■□□□ 1.31
CPNE6-216ENST00000560761 RBM17Q96I25 401 aaKnown RBP23.23■■□□□ 1.31
CPNE6-216ENST00000560761 CRAMP1Q96RY5 1269 aa23.23■■□□□ 1.31
CPNE6-216ENST00000560761 TMEM88BA6NKF7 163 aa23.22■■□□□ 1.31
CPNE6-216ENST00000560761 PPEF1O14829 653 aaPredicted RBP23.22■■□□□ 1.31
CPNE6-216ENST00000560761 CC2D2BQ6DHV5 1058 aa23.22■■□□□ 1.31
CPNE6-216ENST00000560761 CNTROBQ8N137 903 aa23.22■■□□□ 1.31
CPNE6-216ENST00000560761 ERBB4Q15303 1308 aa23.21■■□□□ 1.31
CPNE6-216ENST00000560761 IBTKQ9P2D0 1353 aaPredicted RBP23.2■■□□□ 1.3
CPNE6-216ENST00000560761 FOXN1O15353 648 aa23.2■■□□□ 1.3
CPNE6-216ENST00000560761 TMPOP42166 694 aaKnown RBP23.2■■□□□ 1.3
CPNE6-216ENST00000560761 EIF6P56537 245 aaKnown RBP23.2■■□□□ 1.3
CPNE6-216ENST00000560761 FMR1Q06787 632 aaKnown RBP eCLIP23.2■■□□□ 1.3
CPNE6-216ENST00000560761 PPP1R42Q7Z4L9 355 aa23.2■■□□□ 1.3
CPNE6-216ENST00000560761 PNMA8AQ86V59 439 aaPredicted RBP23.2■■□□□ 1.3
CPNE6-216ENST00000560761 LARGE2Q8N3Y3 721 aa23.2■■□□□ 1.3
CPNE6-216ENST00000560761 ZNF428Q96B54 188 aa23.2■■□□□ 1.3
CPNE6-216ENST00000560761 RIC1Q4ADV7 1423 aa23.19■■□□□ 1.3
CPNE6-216ENST00000560761 EPS15P42566 896 aa23.19■■□□□ 1.3
CPNE6-216ENST00000560761 AIMP1Q12904 312 aaKnown RBP23.19■■□□□ 1.3
CPNE6-216ENST00000560761 KRT24Q2M2I5 525 aa23.19■■□□□ 1.3
CPNE6-216ENST00000560761 NLRP3Q96P20 1036 aa23.19■■□□□ 1.3
CPNE6-216ENST00000560761 ADAMTSL1Q8N6G6 1762 aa23.19■■□□□ 1.3
CPNE6-216ENST00000560761 NEUROD2Q15784 382 aa23.18■■□□□ 1.3
CPNE6-216ENST00000560761 PARP10Q53GL7 1025 aa23.18■■□□□ 1.3
CPNE6-216ENST00000560761 COPS6Q7L5N1 327 aa23.18■■□□□ 1.3
CPNE6-216ENST00000560761 CCDC146Q8IYE0 955 aa23.18■■□□□ 1.3
CPNE6-216ENST00000560761 UTP14AQ9BVJ6 771 aaKnown RBP23.18■■□□□ 1.3
CPNE6-216ENST00000560761 SCNN1DP51172 638 aa23.17■■□□□ 1.3
CPNE6-216ENST00000560761 SLC10A5Q5PT55 438 aa23.17■■□□□ 1.3
CPNE6-216ENST00000560761 LTBP1Q14766 1721 aa23.16■■□□□ 1.3
CPNE6-216ENST00000560761 HCLS1P14317 486 aaPredicted RBP23.16■■□□□ 1.3
CPNE6-216ENST00000560761 AOC3Q16853 763 aa23.16■■□□□ 1.3
CPNE6-216ENST00000560761 DIEXFQ68CQ4 756 aaKnown RBP23.16■■□□□ 1.3
CPNE6-216ENST00000560761 XAGE3Q8WTP9 111 aa23.16■■□□□ 1.3
CPNE6-216ENST00000560761 WDR43Q15061 677 aaKnown RBP eCLIP23.15■■□□□ 1.3
CPNE6-216ENST00000560761 ATP6V0A2Q9Y487 856 aa23.15■■□□□ 1.3
CPNE6-216ENST00000560761 ABCC4O15439 1325 aa23.14■■□□□ 1.3
CPNE6-216ENST00000560761 PPIP5K2O43314 1243 aa23.14■■□□□ 1.29
CPNE6-216ENST00000560761 GRIPAP1Q4V328 841 aa23.14■■□□□ 1.29
CPNE6-216ENST00000560761 NLRP10Q86W26 655 aa23.14■■□□□ 1.29
CPNE6-216ENST00000560761 NIM1KQ8IY84 436 aa23.14■■□□□ 1.29
CPNE6-216ENST00000560761 LMOD1P29536 600 aaPredicted RBP23.13■■□□□ 1.29
CPNE6-216ENST00000560761 DEFB115Q30KQ5 88 aa23.13■■□□□ 1.29
CPNE6-216ENST00000560761 BABAM1Q9NWV8 329 aa23.13■■□□□ 1.29
CPNE6-216ENST00000560761 LAS1LQ9Y4W2 734 aaKnown RBP23.13■■□□□ 1.29
CPNE6-216ENST00000560761 DDX21Q9NR30 783 aaKnown RBP eCLIP23.12■■□□□ 1.29
CPNE6-216ENST00000560761 RASSF10A6NK89 507 aa23.11■■□□□ 1.29
CPNE6-216ENST00000560761 TRAF5O00463 557 aa23.11■■□□□ 1.29
CPNE6-216ENST00000560761 CHL1O00533 1208 aa23.11■■□□□ 1.29
CPNE6-216ENST00000560761 TCIRG1Q13488 830 aa23.11■■□□□ 1.29
CPNE6-216ENST00000560761 ABT1Q9ULW3 272 aaKnown RBP23.11■■□□□ 1.29
CPNE6-216ENST00000560761 TRIM35Q9UPQ4 493 aa23.11■■□□□ 1.29
CPNE6-216ENST00000560761 CXCL9Q07325 125 aa23.1■■□□□ 1.29
CPNE6-216ENST00000560761 LMOD3Q0VAK6 560 aa23.1■■□□□ 1.29
CPNE6-216ENST00000560761 WBP1LQ9NX94 342 aa23.1■■□□□ 1.29
CPNE6-216ENST00000560761 TRMT112Q9UI30 125 aaKnown RBP23.1■■□□□ 1.29
CPNE6-216ENST00000560761 RTFDC1Q9BY42 306 aaPredicted RBP23.09■■□□□ 1.29
CPNE6-216ENST00000560761 TMX4Q9H1E5 349 aaPredicted RBP23.09■■□□□ 1.29
CPNE6-216ENST00000560761 MRS2Q9HD23 443 aa23.09■■□□□ 1.29
CPNE6-216ENST00000560761 CHPF2Q9P2E5 772 aa23.09■■□□□ 1.29
CPNE6-216ENST00000560761 WDR33Q9C0J8 1336 aaKnown RBP23.08■■□□□ 1.29
CPNE6-216ENST00000560761 BBOX1O75936 387 aa23.08■■□□□ 1.29
CPNE6-216ENST00000560761 CTCFP49711 727 aaPredicted RBP23.08■■□□□ 1.29
CPNE6-216ENST00000560761 LBX1P52954 281 aa23.08■■□□□ 1.29
CPNE6-216ENST00000560761 CST9Q5W186 159 aa23.08■■□□□ 1.29
CPNE6-216ENST00000560761 DPP8Q6V1X1 898 aaPredicted RBP23.08■■□□□ 1.29
CPNE6-216ENST00000560761 USP50Q70EL3 339 aaPredicted RBP23.08■■□□□ 1.29
CPNE6-216ENST00000560761 SP8Q8IXZ3 490 aa23.08■■□□□ 1.29
CPNE6-216ENST00000560761 AIDAQ96BJ3 306 aa23.08■■□□□ 1.29
CPNE6-216ENST00000560761 ZNRF3Q9ULT6 936 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms