RNA–Protein interactions for RNA: ENST00000560583.5

RPL28-210, Transcript of ribosomal protein L28, humanhuman

TSL 2 BASIC

Gene RPL28, Length 1,204 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-210ENST00000560583 CHL1O00533 1208 aa23.45■■□□□ 1.34
RPL28-210ENST00000560583 ALDH1B1P30837 517 aa23.45■■□□□ 1.34
RPL28-210ENST00000560583 WDR43Q15061 677 aaKnown RBP eCLIP23.45■■□□□ 1.34
RPL28-210ENST00000560583 KLRG1Q96E93 195 aa23.45■■□□□ 1.34
RPL28-210ENST00000560583 PRKRIP1Q9H875 184 aaPredicted RBP23.45■■□□□ 1.34
RPL28-210ENST00000560583 ADAMTS8Q9UP79 889 aa23.45■■□□□ 1.34
RPL28-210ENST00000560583 POTEIP0CG38 1075 aa23.44■■□□□ 1.34
RPL28-210ENST00000560583 POTEJP0CG39 1038 aa23.44■■□□□ 1.34
RPL28-210ENST00000560583 HOXA10P31260 410 aaPredicted RBP23.44■■□□□ 1.34
RPL28-210ENST00000560583 RTKN2Q8IZC4 609 aa23.44■■□□□ 1.34
RPL28-210ENST00000560583 NECTIN2Q92692 538 aa23.44■■□□□ 1.34
RPL28-210ENST00000560583 L3MBTL3Q96JM7 780 aaPredicted RBP23.43■■□□□ 1.34
RPL28-210ENST00000560583 DDX60Q8IY21 1712 aaKnown RBP23.42■■□□□ 1.34
RPL28-210ENST00000560583 IARSP41252 1262 aaKnown RBP23.41■■□□□ 1.34
RPL28-210ENST00000560583 PARP10Q53GL7 1025 aa23.41■■□□□ 1.34
RPL28-210ENST00000560583 JMYQ8N9B5 988 aa23.41■■□□□ 1.34
RPL28-210ENST00000560583 XAGE3Q8WTP9 111 aa23.41■■□□□ 1.34
RPL28-210ENST00000560583 RPGRQ92834 1020 aaKnown RBP23.41■■□□□ 1.34
RPL28-210ENST00000560583 LTBP1Q14766 1721 aa23.4■■□□□ 1.34
RPL28-210ENST00000560583 COPS6Q7L5N1 327 aa23.4■■□□□ 1.34
RPL28-210ENST00000560583 PPP1R42Q7Z4L9 355 aa23.4■■□□□ 1.34
RPL28-210ENST00000560583 SYNE4Q8N205 404 aa23.4■■□□□ 1.34
RPL28-210ENST00000560583 PSMD1Q99460 953 aa23.4■■□□□ 1.34
RPL28-210ENST00000560583 TAF1P21675 1872 aa23.39■■□□□ 1.34
RPL28-210ENST00000560583 CRAMP1Q96RY5 1269 aa23.39■■□□□ 1.33
RPL28-210ENST00000560583 DDX21Q9NR30 783 aaKnown RBP eCLIP23.39■■□□□ 1.33
RPL28-210ENST00000560583 LAS1LQ9Y4W2 734 aaKnown RBP23.39■■□□□ 1.33
RPL28-210ENST00000560583 CHPF2Q9P2E5 772 aa23.38■■□□□ 1.33
RPL28-210ENST00000560583 FZD9O00144 591 aa23.37■■□□□ 1.33
RPL28-210ENST00000560583 PPEF1O14829 653 aaPredicted RBP23.37■■□□□ 1.33
RPL28-210ENST00000560583 AIMP1Q12904 312 aaKnown RBP23.37■■□□□ 1.33
RPL28-210ENST00000560583 SLC10A5Q5PT55 438 aa23.37■■□□□ 1.33
RPL28-210ENST00000560583 IFFO2Q5TF58 517 aa23.37■■□□□ 1.33
RPL28-210ENST00000560583 CHADLQ6NUI6 762 aa23.37■■□□□ 1.33
RPL28-210ENST00000560583 NLRP10Q86W26 655 aa23.37■■□□□ 1.33
RPL28-210ENST00000560583 UTP14AQ9BVJ6 771 aaKnown RBP23.37■■□□□ 1.33
RPL28-210ENST00000560583 LRRC37AA6NMS7 1700 aa23.36■■□□□ 1.33
RPL28-210ENST00000560583 RNF123Q5XPI4 1314 aa23.36■■□□□ 1.33
RPL28-210ENST00000560583 CC2D2BQ6DHV5 1058 aa23.36■■□□□ 1.33
RPL28-210ENST00000560583 RBM17Q96I25 401 aaKnown RBP23.36■■□□□ 1.33
RPL28-210ENST00000560583 TAF1DQ9H5J8 278 aaPredicted RBP23.36■■□□□ 1.33
RPL28-210ENST00000560583 ABCC4O15439 1325 aa23.35■■□□□ 1.33
RPL28-210ENST00000560583 PCNTO95613 3336 aa23.35■■□□□ 1.33
RPL28-210ENST00000560583 IQCA1LA6NCM1 817 aa23.35■■□□□ 1.33
RPL28-210ENST00000560583 HDGFL1Q5TGJ6 251 aa23.35■■□□□ 1.33
RPL28-210ENST00000560583 HOXB7P09629 217 aa23.34■■□□□ 1.33
RPL28-210ENST00000560583 TCIRG1Q13488 830 aa23.34■■□□□ 1.33
RPL28-210ENST00000560583 HSP90AB3PQ58FF7 597 aa23.34■■□□□ 1.33
RPL28-210ENST00000560583 CFAP44Q96MT7 982 aa23.34■■□□□ 1.33
RPL28-210ENST00000560583 NLRP3Q96P20 1036 aa23.34■■□□□ 1.33
RPL28-210ENST00000560583 MBIPQ9NS73 344 aa23.34■■□□□ 1.33
RPL28-210ENST00000560583 COL4A1P02462 1669 aa23.34■■□□□ 1.33
RPL28-210ENST00000560583 TCERG1O14776 1098 aaKnown RBP23.33■■□□□ 1.33
RPL28-210ENST00000560583 DUOX1Q9NRD9 1551 aa23.32■■□□□ 1.32
RPL28-210ENST00000560583 ZNF853P0CG23 659 aa23.32■■□□□ 1.32
RPL28-210ENST00000560583 LDHDQ86WU2 507 aa23.32■■□□□ 1.32
RPL28-210ENST00000560583 HCLS1P14317 486 aaPredicted RBP23.31■■□□□ 1.32
RPL28-210ENST00000560583 GPC2Q8N158 579 aa23.31■■□□□ 1.32
RPL28-210ENST00000560583 HACL1Q9UJ83 578 aa23.31■■□□□ 1.32
RPL28-210ENST00000560583 PASKQ96RG2 1323 aa23.31■■□□□ 1.32
RPL28-210ENST00000560583 APAF1O14727 1248 aa23.3■■□□□ 1.32
RPL28-210ENST00000560583 GRIPAP1Q4V328 841 aa23.3■■□□□ 1.32
RPL28-210ENST00000560583 DUSP27Q5VZP5 1158 aa23.3■■□□□ 1.32
RPL28-210ENST00000560583 ZNF428Q96B54 188 aa23.3■■□□□ 1.32
RPL28-210ENST00000560583 ATP6V0A2Q9Y487 856 aa23.3■■□□□ 1.32
RPL28-210ENST00000560583 EPHX2P34913 555 aa23.29■■□□□ 1.32
RPL28-210ENST00000560583 PLBD2Q8NHP8 589 aa23.29■■□□□ 1.32
RPL28-210ENST00000560583 JDP2Q8WYK2 163 aa23.29■■□□□ 1.32
RPL28-210ENST00000560583 DBF4Q9UBU7 674 aaPredicted RBP23.29■■□□□ 1.32
RPL28-210ENST00000560583 TRMT112Q9UI30 125 aaKnown RBP23.29■■□□□ 1.32
RPL28-210ENST00000560583 SH3TC1Q8TE82 1336 aa23.29■■□□□ 1.32
RPL28-210ENST00000560583 LARGE2Q8N3Y3 721 aa23.28■■□□□ 1.32
RPL28-210ENST00000560583 ISCA1Q9BUE6 129 aa23.28■■□□□ 1.32
RPL28-210ENST00000560583 EAPPQ56P03 285 aaPredicted RBP23.27■■□□□ 1.32
RPL28-210ENST00000560583 CREBZFQ9NS37 354 aa23.27■■□□□ 1.32
RPL28-210ENST00000560583 IFT57Q9NWB7 429 aa23.27■■□□□ 1.32
RPL28-210ENST00000560583 ITGBL1O95965 494 aaPredicted RBP23.26■■□□□ 1.31
RPL28-210ENST00000560583 CCDC184Q52MB2 194 aa23.26■■□□□ 1.31
RPL28-210ENST00000560583 ANKRD13DQ6ZTN6 518 aa23.26■■□□□ 1.31
RPL28-210ENST00000560583 SCNN1DP51172 638 aa23.25■■□□□ 1.31
RPL28-210ENST00000560583 EIF6P56537 245 aaKnown RBP23.25■■□□□ 1.31
RPL28-210ENST00000560583 AOC3Q16853 763 aa23.25■■□□□ 1.31
RPL28-210ENST00000560583 RTFDC1Q9BY42 306 aaPredicted RBP23.25■■□□□ 1.31
RPL28-210ENST00000560583 GJA3Q9Y6H8 435 aa23.25■■□□□ 1.31
RPL28-210ENST00000560583 ATP5J2-PTCD1G3V325 749 aa23.24■■□□□ 1.31
RPL28-210ENST00000560583 PPIP5K2O43314 1243 aa23.24■■□□□ 1.31
RPL28-210ENST00000560583 HYPKQ9NX55 129 aa23.24■■□□□ 1.31
RPL28-210ENST00000560583 GNAI1P63096 354 aa23.23■■□□□ 1.31
RPL28-210ENST00000560583 GRAPQ13588 217 aa23.23■■□□□ 1.31
RPL28-210ENST00000560583 SP8Q8IXZ3 490 aa23.23■■□□□ 1.31
RPL28-210ENST00000560583 NIM1KQ8IY84 436 aa23.23■■□□□ 1.31
RPL28-210ENST00000560583 GRAPLQ8TC17 118 aaPredicted RBP23.23■■□□□ 1.31
RPL28-210ENST00000560583 BBOX1O75936 387 aa23.22■■□□□ 1.31
RPL28-210ENST00000560583 DDX46Q7L014 1031 aaKnown RBP23.22■■□□□ 1.31
RPL28-210ENST00000560583 PNMA8AQ86V59 439 aaPredicted RBP23.22■■□□□ 1.31
RPL28-210ENST00000560583 FAM89AQ96GI7 184 aa23.22■■□□□ 1.31
RPL28-210ENST00000560583 MKRN1Q9UHC7 482 aaKnown RBP23.22■■□□□ 1.31
RPL28-210ENST00000560583 ELL2O00472 640 aaPredicted RBP23.21■■□□□ 1.31
RPL28-210ENST00000560583 MAP1SQ66K74 1059 aaPredicted RBP23.21■■□□□ 1.31
RPL28-210ENST00000560583 PHAXQ9H814 394 aaKnown RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms