RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 IL16Q14005 1332 aa15.08■□□□□ 0
RABGGTA-216ENST00000560243 TCERG1O14776 1098 aaKnown RBP15.07■□□□□ 0
RABGGTA-216ENST00000560243 CRY2Q49AN0 593 aa15.07■□□□□ 0
RABGGTA-216ENST00000560243 OLFM4Q6UX06 510 aa15.07■□□□□ 0
RABGGTA-216ENST00000560243 ANKRD13DQ6ZTN6 518 aa15.07■□□□□ 0
RABGGTA-216ENST00000560243 C7orf43Q8WVR3 580 aa15.07■□□□□ 0
RABGGTA-216ENST00000560243 GPBP1L1Q9HC44 474 aaPredicted RBP15.07■□□□□ 0
RABGGTA-216ENST00000560243 SPINK5Q9NQ38 1064 aaPredicted RBP15.07■□□□□ 0
RABGGTA-216ENST00000560243 ATP5J2-PTCD1G3V325 749 aa15.06■□□□□ 0
RABGGTA-216ENST00000560243 HSP90AB3PQ58FF7 597 aa15.06■□□□□ 0
RABGGTA-216ENST00000560243 PPP1R42Q7Z4L9 355 aa15.06■□□□□ 0
RABGGTA-216ENST00000560243 SLC51AQ86UW1 340 aa15.06■□□□□ 0
RABGGTA-216ENST00000560243 UTP14AQ9BVJ6 771 aaKnown RBP15.06■□□□□ 0
RABGGTA-216ENST00000560243 FANCIQ9NVI1 1328 aa15.06■□□□□ 0
RABGGTA-216ENST00000560243 LMNB1P20700 586 aa15.05■□□□□ -0
RABGGTA-216ENST00000560243 WDR63Q8IWG1 891 aa15.05■□□□□ -0
RABGGTA-216ENST00000560243 RIC1Q4ADV7 1423 aa15.05■□□□□ -0
RABGGTA-216ENST00000560243 LAMB2P55268 1798 aa15.04■□□□□ -0
RABGGTA-216ENST00000560243 HCLS1P14317 486 aaPredicted RBP15.04■□□□□ -0
RABGGTA-216ENST00000560243 TWISTNBQ3B726 338 aaPredicted RBP15.04■□□□□ -0
RABGGTA-216ENST00000560243 SLC10A5Q5PT55 438 aa15.04■□□□□ -0
RABGGTA-216ENST00000560243 CCDC30Q5VVM6 783 aa15.04■□□□□ -0
RABGGTA-216ENST00000560243 ISCA1Q9BUE6 129 aa15.04■□□□□ -0
RABGGTA-216ENST00000560243 HOXA10P31260 410 aaPredicted RBP15.03■□□□□ -0
RABGGTA-216ENST00000560243 TRMT112Q9UI30 125 aaKnown RBP15.03■□□□□ -0
RABGGTA-216ENST00000560243 TIAM2Q8IVF5 1701 aa15.03■□□□□ -0
RABGGTA-216ENST00000560243 C1QTNF8P60827 252 aa15.02■□□□□ -0
RABGGTA-216ENST00000560243 GOLGA2Q08379 1002 aa15.02■□□□□ -0
RABGGTA-216ENST00000560243 G2E3Q7L622 706 aa15.02■□□□□ -0
RABGGTA-216ENST00000560243 RIC3Q7Z5B4 369 aa15.02■□□□□ -0
RABGGTA-216ENST00000560243 RPGRQ92834 1020 aaKnown RBP15.02■□□□□ -0
RABGGTA-216ENST00000560243 NMRK2Q9NPI5 230 aa15.02■□□□□ -0
RABGGTA-216ENST00000560243 DDX60Q8IY21 1712 aaKnown RBP15.01□□□□□ -0.01
RABGGTA-216ENST00000560243 SH3TC1Q8TE82 1336 aa15.01□□□□□ -0.01
RABGGTA-216ENST00000560243 LTBP3Q9NS15 1303 aa15.01□□□□□ -0.01
RABGGTA-216ENST00000560243 KIF3CO14782 793 aa15.01□□□□□ -0.01
RABGGTA-216ENST00000560243 ALDH1B1P30837 517 aa15.01□□□□□ -0.01
RABGGTA-216ENST00000560243 EXOSC9Q06265 439 aaKnown RBP15.01□□□□□ -0.01
RABGGTA-216ENST00000560243 CCDC93Q567U6 631 aa15.01□□□□□ -0.01
RABGGTA-216ENST00000560243 RTL5Q5HYW3 569 aaPredicted RBP15.01□□□□□ -0.01
RABGGTA-216ENST00000560243 FAM89AQ96GI7 184 aa15.01□□□□□ -0.01
RABGGTA-216ENST00000560243 NLRP3Q96P20 1036 aa15.01□□□□□ -0.01
RABGGTA-216ENST00000560243 TAOK3Q9H2K8 898 aa15.01□□□□□ -0.01
RABGGTA-216ENST00000560243 DICER1Q9UPY3 1922 aaKnown RBP15.01□□□□□ -0.01
RABGGTA-216ENST00000560243 TAF1P21675 1872 aa15.01□□□□□ -0.01
RABGGTA-216ENST00000560243 RNF123Q5XPI4 1314 aa15□□□□□ -0.01
RABGGTA-216ENST00000560243 ZNF521Q96K83 1311 aa15□□□□□ -0.01
RABGGTA-216ENST00000560243 VAMP4O75379 141 aa15□□□□□ -0.01
RABGGTA-216ENST00000560243 SOGA3Q5TF21 947 aa15□□□□□ -0.01
RABGGTA-216ENST00000560243 CRAMP1Q96RY5 1269 aa15□□□□□ -0.01
RABGGTA-216ENST00000560243 MYD88Q99836 296 aa15□□□□□ -0.01
RABGGTA-216ENST00000560243 SNED1Q8TER0 1413 aa15□□□□□ -0.01
RABGGTA-216ENST00000560243 SLC4A2P04920 1241 aa14.99□□□□□ -0.01
RABGGTA-216ENST00000560243 TRIM28Q13263 835 aaKnown RBP14.99□□□□□ -0.01
RABGGTA-216ENST00000560243 RBM17Q96I25 401 aaKnown RBP14.99□□□□□ -0.01
RABGGTA-216ENST00000560243 STK31Q9BXU1 1019 aa14.99□□□□□ -0.01
RABGGTA-216ENST00000560243 PI4KAP2A4QPH2 592 aa14.98□□□□□ -0.01
RABGGTA-216ENST00000560243 PI4KAP1Q8N8J0 262 aa14.98□□□□□ -0.01
RABGGTA-216ENST00000560243 JARID2Q92833 1246 aaPredicted RBP14.98□□□□□ -0.01
RABGGTA-216ENST00000560243 METTL22Q9BUU2 404 aaPredicted RBP14.98□□□□□ -0.01
RABGGTA-216ENST00000560243 CHMP4AQ9BY43 222 aa14.98□□□□□ -0.01
RABGGTA-216ENST00000560243 ZNF277Q9NRM2 450 aaPredicted RBP14.98□□□□□ -0.01
RABGGTA-216ENST00000560243 MAP3K2Q9Y2U5 619 aa14.98□□□□□ -0.01
RABGGTA-216ENST00000560243 ABCC4O15439 1325 aa14.97□□□□□ -0.01
RABGGTA-216ENST00000560243 CCER2I3L3R5 266 aa14.97□□□□□ -0.01
RABGGTA-216ENST00000560243 PPEF1O14829 653 aaPredicted RBP14.97□□□□□ -0.01
RABGGTA-216ENST00000560243 FKBP4Q02790 459 aaKnown RBP eCLIP14.97□□□□□ -0.01
RABGGTA-216ENST00000560243 KSR2Q6VAB6 950 aa14.97□□□□□ -0.01
RABGGTA-216ENST00000560243 MYH16Q9H6N6 1097 aa14.97□□□□□ -0.01
RABGGTA-216ENST00000560243 COL4A1P02462 1669 aa14.97□□□□□ -0.01
RABGGTA-216ENST00000560243 KDM2BQ8NHM5 1336 aa14.96□□□□□ -0.01
RABGGTA-216ENST00000560243 ZC3H4Q9UPT8 1303 aaKnown RBP14.96□□□□□ -0.01
RABGGTA-216ENST00000560243 DDX58O95786 925 aaKnown RBP14.96□□□□□ -0.01
RABGGTA-216ENST00000560243 RTKN2Q8IZC4 609 aa14.96□□□□□ -0.01
RABGGTA-216ENST00000560243 RRAGCQ9HB90 399 aa14.96□□□□□ -0.01
RABGGTA-216ENST00000560243 CACNA1FO60840 1977 aa14.95□□□□□ -0.02
RABGGTA-216ENST00000560243 GLTPD2A6NH11 291 aa14.95□□□□□ -0.02
RABGGTA-216ENST00000560243 IRS4O14654 1257 aaPredicted RBP14.95□□□□□ -0.02
RABGGTA-216ENST00000560243 IGKV5-2P06315 115 aa14.95□□□□□ -0.02
RABGGTA-216ENST00000560243 FLIIQ13045 1269 aa14.95□□□□□ -0.02
RABGGTA-216ENST00000560243 CCDC191Q8NCU4 936 aa14.95□□□□□ -0.02
RABGGTA-216ENST00000560243 CEP350Q5VT06 3117 aa14.95□□□□□ -0.02
RABGGTA-216ENST00000560243 COL4A5P29400 1685 aa14.94□□□□□ -0.02
RABGGTA-216ENST00000560243 CWF19L2Q2TBE0 894 aaKnown RBP14.94□□□□□ -0.02
RABGGTA-216ENST00000560243 DDX46Q7L014 1031 aaKnown RBP14.94□□□□□ -0.02
RABGGTA-216ENST00000560243 ZBTB38Q8NAP3 1195 aaPredicted RBP14.94□□□□□ -0.02
RABGGTA-216ENST00000560243 CWC25Q9NXE8 425 aaPredicted RBP14.94□□□□□ -0.02
RABGGTA-216ENST00000560243 ATP6V0A2Q9Y487 856 aa14.94□□□□□ -0.02
RABGGTA-216ENST00000560243 IARSP41252 1262 aaKnown RBP14.93□□□□□ -0.02
RABGGTA-216ENST00000560243 SF3B3Q15393 1217 aaKnown RBP14.93□□□□□ -0.02
RABGGTA-216ENST00000560243 CC2D2BQ6DHV5 1058 aa14.93□□□□□ -0.02
RABGGTA-216ENST00000560243 MIER1Q8N108 512 aa14.93□□□□□ -0.02
RABGGTA-216ENST00000560243 PSMD1Q99460 953 aa14.93□□□□□ -0.02
RABGGTA-216ENST00000560243 POTECB2RU33 542 aa14.92□□□□□ -0.02
RABGGTA-216ENST00000560243 BBOX1O75936 387 aa14.92□□□□□ -0.02
RABGGTA-216ENST00000560243 DDNO94850 711 aaPredicted RBP14.92□□□□□ -0.02
RABGGTA-216ENST00000560243 PCCAP05165 728 aaPredicted RBP14.92□□□□□ -0.02
RABGGTA-216ENST00000560243 FKBP5Q13451 457 aaPredicted RBP14.92□□□□□ -0.02
RABGGTA-216ENST00000560243 GRAPQ13588 217 aa14.92□□□□□ -0.02
RABGGTA-216ENST00000560243 DIEXFQ68CQ4 756 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms