RNA–Protein interactions for RNA: ENST00000559778.5

CPNE6-213, Transcript of copine 6, humanhuman

TSL 4

Gene CPNE6, Length 543 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6-213ENST00000559778 PARP10Q53GL7 1025 aa21.49■■□□□ 1.03
CPNE6-213ENST00000559778 NUTM1Q86Y26 1132 aa21.49■■□□□ 1.03
CPNE6-213ENST00000559778 GPTP24298 496 aa21.48■■□□□ 1.03
CPNE6-213ENST00000559778 HOXA10P31260 410 aaPredicted RBP21.48■■□□□ 1.03
CPNE6-213ENST00000559778 SUSD4Q5VX71 490 aa21.48■■□□□ 1.03
CPNE6-213ENST00000559778 CC2D2BQ6DHV5 1058 aa21.48■■□□□ 1.03
CPNE6-213ENST00000559778 PPP1R42Q7Z4L9 355 aa21.48■■□□□ 1.03
CPNE6-213ENST00000559778 PASKQ96RG2 1323 aa21.48■■□□□ 1.03
CPNE6-213ENST00000559778 CHL1O00533 1208 aa21.47■■□□□ 1.03
CPNE6-213ENST00000559778 NTSR2O95665 410 aa21.47■■□□□ 1.03
CPNE6-213ENST00000559778 EIF2S2P20042 333 aaKnown RBP21.47■■□□□ 1.03
CPNE6-213ENST00000559778 GRIPAP1Q4V328 841 aa21.47■■□□□ 1.03
CPNE6-213ENST00000559778 LDHDQ86WU2 507 aa21.47■■□□□ 1.03
CPNE6-213ENST00000559778 CCDC146Q8IYE0 955 aa21.47■■□□□ 1.03
CPNE6-213ENST00000559778 TAF1DQ9H5J8 278 aaPredicted RBP21.47■■□□□ 1.03
CPNE6-213ENST00000559778 MKRN1Q9UHC7 482 aaKnown RBP21.47■■□□□ 1.03
CPNE6-213ENST00000559778 RNF123Q5XPI4 1314 aa21.47■■□□□ 1.03
CPNE6-213ENST00000559778 CNTNAP1P78357 1384 aa21.47■■□□□ 1.03
CPNE6-213ENST00000559778 RPGRQ92834 1020 aaKnown RBP21.46■■□□□ 1.03
CPNE6-213ENST00000559778 PSMD1Q99460 953 aa21.46■■□□□ 1.03
CPNE6-213ENST00000559778 ZNF541Q9H0D2 1346 aa21.46■■□□□ 1.03
CPNE6-213ENST00000559778 TRPM7Q96QT4 1865 aa21.45■■□□□ 1.02
CPNE6-213ENST00000559778 NEUROD2Q15784 382 aa21.45■■□□□ 1.02
CPNE6-213ENST00000559778 CRAMP1Q96RY5 1269 aa21.45■■□□□ 1.02
CPNE6-213ENST00000559778 PRKRIP1Q9H875 184 aaPredicted RBP21.45■■□□□ 1.02
CPNE6-213ENST00000559778 TRIM35Q9UPQ4 493 aa21.45■■□□□ 1.02
CPNE6-213ENST00000559778 LTBP1Q14766 1721 aa21.44■■□□□ 1.02
CPNE6-213ENST00000559778 IARSP41252 1262 aaKnown RBP21.44■■□□□ 1.02
CPNE6-213ENST00000559778 PROSER3Q2NL68 480 aa21.44■■□□□ 1.02
CPNE6-213ENST00000559778 HSP90AB3PQ58FF7 597 aa21.44■■□□□ 1.02
CPNE6-213ENST00000559778 OLFM4Q6UX06 510 aa21.44■■□□□ 1.02
CPNE6-213ENST00000559778 ZNF277Q9NRM2 450 aaPredicted RBP21.44■■□□□ 1.02
CPNE6-213ENST00000559778 ADAMTS8Q9UP79 889 aa21.44■■□□□ 1.02
CPNE6-213ENST00000559778 DDX60Q8IY21 1712 aaKnown RBP21.43■■□□□ 1.02
CPNE6-213ENST00000559778 HOXB7P09629 217 aa21.43■■□□□ 1.02
CPNE6-213ENST00000559778 RBM17Q96I25 401 aaKnown RBP21.43■■□□□ 1.02
CPNE6-213ENST00000559778 DDX21Q9NR30 783 aaKnown RBP eCLIP21.43■■□□□ 1.02
CPNE6-213ENST00000559778 COL4A5P29400 1685 aa21.42■■□□□ 1.02
CPNE6-213ENST00000559778 SLC10A5Q5PT55 438 aa21.42■■□□□ 1.02
CPNE6-213ENST00000559778 SYNE4Q8N205 404 aa21.42■■□□□ 1.02
CPNE6-213ENST00000559778 UTP14AQ9BVJ6 771 aaKnown RBP21.42■■□□□ 1.02
CPNE6-213ENST00000559778 FZD9O00144 591 aa21.41■■□□□ 1.02
CPNE6-213ENST00000559778 ITGBL1O95965 494 aaPredicted RBP21.41■■□□□ 1.02
CPNE6-213ENST00000559778 ANXA1P04083 346 aa21.41■■□□□ 1.02
CPNE6-213ENST00000559778 COPS6Q7L5N1 327 aa21.41■■□□□ 1.02
CPNE6-213ENST00000559778 NLRP3Q96P20 1036 aa21.41■■□□□ 1.02
CPNE6-213ENST00000559778 HACL1Q9UJ83 578 aa21.41■■□□□ 1.02
CPNE6-213ENST00000559778 THSD7BQ9C0I4 1608 aa21.4■■□□□ 1.02
CPNE6-213ENST00000559778 XAGE3Q8WTP9 111 aa21.4■■□□□ 1.02
CPNE6-213ENST00000559778 TAF1P21675 1872 aa21.4■■□□□ 1.02
CPNE6-213ENST00000559778 LRRC37AA6NMS7 1700 aa21.39■■□□□ 1.01
CPNE6-213ENST00000559778 PPEF1O14829 653 aaPredicted RBP21.39■■□□□ 1.01
CPNE6-213ENST00000559778 EPHX2P34913 555 aa21.39■■□□□ 1.01
CPNE6-213ENST00000559778 EAPPQ56P03 285 aaPredicted RBP21.39■■□□□ 1.01
CPNE6-213ENST00000559778 JDP2Q8WYK2 163 aa21.39■■□□□ 1.01
CPNE6-213ENST00000559778 CFAP44Q96MT7 982 aa21.39■■□□□ 1.01
CPNE6-213ENST00000559778 TMEM88BA6NKF7 163 aa21.38■■□□□ 1.01
CPNE6-213ENST00000559778 FOXN1O15353 648 aa21.38■■□□□ 1.01
CPNE6-213ENST00000559778 TCIRG1Q13488 830 aa21.38■■□□□ 1.01
CPNE6-213ENST00000559778 KRT24Q2M2I5 525 aa21.38■■□□□ 1.01
CPNE6-213ENST00000559778 GPC2Q8N158 579 aa21.38■■□□□ 1.01
CPNE6-213ENST00000559778 NECTIN2Q92692 538 aa21.38■■□□□ 1.01
CPNE6-213ENST00000559778 LAS1LQ9Y4W2 734 aaKnown RBP21.38■■□□□ 1.01
CPNE6-213ENST00000559778 AIMP1Q12904 312 aaKnown RBP21.37■■□□□ 1.01
CPNE6-213ENST00000559778 HDGFL1Q5TGJ6 251 aa21.37■■□□□ 1.01
CPNE6-213ENST00000559778 C3orf67Q6ZVT6 689 aa21.37■■□□□ 1.01
CPNE6-213ENST00000559778 NLRP10Q86W26 655 aa21.37■■□□□ 1.01
CPNE6-213ENST00000559778 PNMA8AQ86V59 439 aaPredicted RBP21.36■■□□□ 1.01
CPNE6-213ENST00000559778 CHPF2Q9P2E5 772 aa21.36■■□□□ 1.01
CPNE6-213ENST00000559778 DBF4Q9UBU7 674 aaPredicted RBP21.36■■□□□ 1.01
CPNE6-213ENST00000559778 VEGFBP49765 207 aa21.35■■□□□ 1.01
CPNE6-213ENST00000559778 PLBD2Q8NHP8 589 aa21.35■■□□□ 1.01
CPNE6-213ENST00000559778 TMX4Q9H1E5 349 aaPredicted RBP21.35■■□□□ 1.01
CPNE6-213ENST00000559778 VPS33BQ9H267 617 aa21.35■■□□□ 1.01
CPNE6-213ENST00000559778 CLEC11AQ9Y240 323 aa21.35■■□□□ 1.01
CPNE6-213ENST00000559778 ATP6V0A2Q9Y487 856 aa21.35■■□□□ 1.01
CPNE6-213ENST00000559778 SH3TC1Q8TE82 1336 aa21.34■■□□□ 1.01
CPNE6-213ENST00000559778 ZNF853P0CG23 659 aa21.34■■□□□ 1.01
CPNE6-213ENST00000559778 CALD1Q05682 793 aaKnown RBP21.34■■□□□ 1.01
CPNE6-213ENST00000559778 PRDM10Q9NQV6 1147 aa21.34■■□□□ 1.01
CPNE6-213ENST00000559778 ABCC4O15439 1325 aa21.33■■□□□ 1.01
CPNE6-213ENST00000559778 EIF6P56537 245 aaKnown RBP21.33■■□□□ 1.01
CPNE6-213ENST00000559778 MBIPQ9NS73 344 aa21.33■■□□□ 1.01
CPNE6-213ENST00000559778 HYPKQ9NX55 129 aa21.33■■□□□ 1.01
CPNE6-213ENST00000559778 TRMT112Q9UI30 125 aaKnown RBP21.33■■□□□ 1.01
CPNE6-213ENST00000559778 RASSF10A6NK89 507 aa21.32■■□□□ 1
CPNE6-213ENST00000559778 BBOX1O75936 387 aa21.32■■□□□ 1
CPNE6-213ENST00000559778 DUSP27Q5VZP5 1158 aa21.32■■□□□ 1
CPNE6-213ENST00000559778 MAP1SQ66K74 1059 aaPredicted RBP21.32■■□□□ 1
CPNE6-213ENST00000559778 ANKRD13DQ6ZTN6 518 aa21.32■■□□□ 1
CPNE6-213ENST00000559778 CNTROBQ8N137 903 aa21.32■■□□□ 1
CPNE6-213ENST00000559778 LARGE2Q8N3Y3 721 aa21.32■■□□□ 1
CPNE6-213ENST00000559778 IFT57Q9NWB7 429 aa21.32■■□□□ 1
CPNE6-213ENST00000559778 APAF1O14727 1248 aa21.31■■□□□ 1
CPNE6-213ENST00000559778 CTCFP49711 727 aaPredicted RBP21.31■■□□□ 1
CPNE6-213ENST00000559778 GNAI1P63096 354 aa21.31■■□□□ 1
CPNE6-213ENST00000559778 SUPT20HQ8NEM7 779 aa21.31■■□□□ 1
CPNE6-213ENST00000559778 AIDAQ96BJ3 306 aa21.31■■□□□ 1
CPNE6-213ENST00000559778 TMC4Q7Z404 712 aa21.3■■□□□ 1
CPNE6-213ENST00000559778 SP8Q8IXZ3 490 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms