RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 NGEFQ8N5V2 710 aa14.72□□□□□ -0.05
HERC1-204ENST00000559715 RRP7AQ9Y3A4 280 aaKnown RBP14.72□□□□□ -0.05
HERC1-204ENST00000559715 TAF1P21675 1872 aa14.72□□□□□ -0.05
HERC1-204ENST00000559715 ANKRD36CQ5JPF3 1778 aa14.71□□□□□ -0.05
HERC1-204ENST00000559715 EPHX2P34913 555 aa14.71□□□□□ -0.05
HERC1-204ENST00000559715 PNISRQ8TF01 805 aaKnown RBP14.71□□□□□ -0.05
HERC1-204ENST00000559715 RNF123Q5XPI4 1314 aa14.7□□□□□ -0.06
HERC1-204ENST00000559715 FOXN1O15353 648 aa14.7□□□□□ -0.06
HERC1-204ENST00000559715 MYL6BP14649 208 aa14.7□□□□□ -0.06
HERC1-204ENST00000559715 GPTP24298 496 aa14.7□□□□□ -0.06
HERC1-204ENST00000559715 PROSER3Q2NL68 480 aa14.7□□□□□ -0.06
HERC1-204ENST00000559715 GIGYF2Q6Y7W6 1299 aaKnown RBP14.7□□□□□ -0.06
HERC1-204ENST00000559715 GPC2Q8N158 579 aa14.7□□□□□ -0.06
HERC1-204ENST00000559715 NYXQ9GZU5 481 aa14.7□□□□□ -0.06
HERC1-204ENST00000559715 ZBTB3Q9H5J0 574 aa14.7□□□□□ -0.06
HERC1-204ENST00000559715 HACL1Q9UJ83 578 aa14.7□□□□□ -0.06
HERC1-204ENST00000559715 VEGFBP49765 207 aa14.69□□□□□ -0.06
HERC1-204ENST00000559715 SLC10A5Q5PT55 438 aa14.69□□□□□ -0.06
HERC1-204ENST00000559715 CRAMP1Q96RY5 1269 aa14.69□□□□□ -0.06
HERC1-204ENST00000559715 ERBB4Q15303 1308 aa14.68□□□□□ -0.06
HERC1-204ENST00000559715 TMEM88BA6NKF7 163 aa14.68□□□□□ -0.06
HERC1-204ENST00000559715 SCNN1DP51172 638 aa14.68□□□□□ -0.06
HERC1-204ENST00000559715 MAPK8IP2Q13387 824 aaPredicted RBP14.68□□□□□ -0.06
HERC1-204ENST00000559715 MAP1SQ66K74 1059 aaPredicted RBP14.68□□□□□ -0.06
HERC1-204ENST00000559715 CC2D2BQ6DHV5 1058 aa14.68□□□□□ -0.06
HERC1-204ENST00000559715 TRPM7Q96QT4 1865 aa14.67□□□□□ -0.06
HERC1-204ENST00000559715 CAPN15O75808 1086 aa14.67□□□□□ -0.06
HERC1-204ENST00000559715 GTF2E1P29083 439 aaPredicted RBP14.67□□□□□ -0.06
HERC1-204ENST00000559715 FMR1Q06787 632 aaKnown RBP eCLIP14.67□□□□□ -0.06
HERC1-204ENST00000559715 EAPPQ56P03 285 aaPredicted RBP14.67□□□□□ -0.06
HERC1-204ENST00000559715 CNTROBQ8N137 903 aa14.67□□□□□ -0.06
HERC1-204ENST00000559715 CNKSR2Q8WXI2 1034 aa14.67□□□□□ -0.06
HERC1-204ENST00000559715 THSD7BQ9C0I4 1608 aa14.66□□□□□ -0.06
HERC1-204ENST00000559715 RASSF10A6NK89 507 aa14.66□□□□□ -0.06
HERC1-204ENST00000559715 ANXA1P04083 346 aa14.66□□□□□ -0.06
HERC1-204ENST00000559715 EPS15P42566 896 aa14.66□□□□□ -0.06
HERC1-204ENST00000559715 KIF6Q6ZMV9 814 aa14.66□□□□□ -0.06
HERC1-204ENST00000559715 PNMA8AQ86V59 439 aaPredicted RBP14.66□□□□□ -0.06
HERC1-204ENST00000559715 WBP1LQ9NX94 342 aa14.66□□□□□ -0.06
HERC1-204ENST00000559715 COL4A1P02462 1669 aa14.65□□□□□ -0.06
HERC1-204ENST00000559715 DDX60Q8IY21 1712 aaKnown RBP14.64□□□□□ -0.07
HERC1-204ENST00000559715 TMPOP42166 694 aaKnown RBP14.64□□□□□ -0.07
HERC1-204ENST00000559715 JDP2Q8WYK2 163 aa14.64□□□□□ -0.07
HERC1-204ENST00000559715 RPGRQ92834 1020 aaKnown RBP14.64□□□□□ -0.07
HERC1-204ENST00000559715 RTFDC1Q9BY42 306 aaPredicted RBP14.64□□□□□ -0.07
HERC1-204ENST00000559715 TSPYL4Q9UJ04 414 aa14.64□□□□□ -0.07
HERC1-204ENST00000559715 DUOX1Q9NRD9 1551 aa14.64□□□□□ -0.07
HERC1-204ENST00000559715 LRRC37AA6NMS7 1700 aa14.63□□□□□ -0.07
HERC1-204ENST00000559715 PPEF1O14829 653 aaPredicted RBP14.63□□□□□ -0.07
HERC1-204ENST00000559715 RIPK4P57078 832 aa14.63□□□□□ -0.07
HERC1-204ENST00000559715 KRT24Q2M2I5 525 aa14.63□□□□□ -0.07
HERC1-204ENST00000559715 GRIPAP1Q4V328 841 aa14.63□□□□□ -0.07
HERC1-204ENST00000559715 PARP10Q53GL7 1025 aa14.63□□□□□ -0.07
HERC1-204ENST00000559715 CST9Q5W186 159 aa14.63□□□□□ -0.07
HERC1-204ENST00000559715 RBM17Q96I25 401 aaKnown RBP14.63□□□□□ -0.07
HERC1-204ENST00000559715 PRDM10Q9NQV6 1147 aa14.63□□□□□ -0.07
HERC1-204ENST00000559715 DDX21Q9NR30 783 aaKnown RBP eCLIP14.63□□□□□ -0.07
HERC1-204ENST00000559715 BABAM1Q9NWV8 329 aa14.63□□□□□ -0.07
HERC1-204ENST00000559715 CLEC11AQ9Y240 323 aa14.63□□□□□ -0.07
HERC1-204ENST00000559715 ATP6V0A2Q9Y487 856 aa14.63□□□□□ -0.07
HERC1-204ENST00000559715 ABCC4O15439 1325 aa14.63□□□□□ -0.07
HERC1-204ENST00000559715 TCERG1O14776 1098 aaKnown RBP14.62□□□□□ -0.07
HERC1-204ENST00000559715 EIF2S2P20042 333 aaKnown RBP14.62□□□□□ -0.07
HERC1-204ENST00000559715 CXCL9Q07325 125 aa14.62□□□□□ -0.07
HERC1-204ENST00000559715 NLRP10Q86W26 655 aa14.62□□□□□ -0.07
HERC1-204ENST00000559715 LARGE2Q8N3Y3 721 aa14.62□□□□□ -0.07
HERC1-204ENST00000559715 GJA3Q9Y6H8 435 aa14.62□□□□□ -0.07
HERC1-204ENST00000559715 CHL1O00533 1208 aa14.61□□□□□ -0.07
HERC1-204ENST00000559715 TNRC18O15417 2968 aaPredicted RBP14.61□□□□□ -0.07
HERC1-204ENST00000559715 EIF6P56537 245 aaKnown RBP14.61□□□□□ -0.07
HERC1-204ENST00000559715 AOC3Q16853 763 aa14.61□□□□□ -0.07
HERC1-204ENST00000559715 DEFB115Q30KQ5 88 aa14.61□□□□□ -0.07
HERC1-204ENST00000559715 COPS6Q7L5N1 327 aa14.61□□□□□ -0.07
HERC1-204ENST00000559715 PPP1R42Q7Z4L9 355 aa14.61□□□□□ -0.07
HERC1-204ENST00000559715 NLRP3Q96P20 1036 aa14.61□□□□□ -0.07
HERC1-204ENST00000559715 UTP14AQ9BVJ6 771 aaKnown RBP14.61□□□□□ -0.07
HERC1-204ENST00000559715 TRIM35Q9UPQ4 493 aa14.61□□□□□ -0.07
HERC1-204ENST00000559715 POLR2AP24928 1970 aaKnown RBP14.6□□□□□ -0.07
HERC1-204ENST00000559715 TRAF5O00463 557 aa14.6□□□□□ -0.07
HERC1-204ENST00000559715 NEFMP07197 916 aa14.6□□□□□ -0.07
HERC1-204ENST00000559715 XAGE3Q8WTP9 111 aa14.6□□□□□ -0.07
HERC1-204ENST00000559715 VPS33BQ9H267 617 aa14.6□□□□□ -0.07
HERC1-204ENST00000559715 GPRC5DQ9NZD1 345 aa14.6□□□□□ -0.07
HERC1-204ENST00000559715 PGAP2Q9UHJ9 254 aa14.6□□□□□ -0.07
HERC1-204ENST00000559715 WDR33Q9C0J8 1336 aaKnown RBP14.6□□□□□ -0.07
HERC1-204ENST00000559715 MAPK8IP3Q9UPT6 1336 aa14.6□□□□□ -0.07
HERC1-204ENST00000559715 HSPA8P11142 646 aaKnown RBP14.59□□□□□ -0.07
HERC1-204ENST00000559715 HCLS1P14317 486 aaPredicted RBP14.59□□□□□ -0.07
HERC1-204ENST00000559715 CTCFP49711 727 aaPredicted RBP14.59□□□□□ -0.07
HERC1-204ENST00000559715 TCIRG1Q13488 830 aa14.59□□□□□ -0.07
HERC1-204ENST00000559715 USP50Q70EL3 339 aaPredicted RBP14.59□□□□□ -0.07
HERC1-204ENST00000559715 SP8Q8IXZ3 490 aa14.59□□□□□ -0.07
HERC1-204ENST00000559715 PNNQ9H307 717 aaKnown RBP14.59□□□□□ -0.07
HERC1-204ENST00000559715 YDJCA8MPS7 323 aa14.58□□□□□ -0.08
HERC1-204ENST00000559715 PPIP5K2O43314 1243 aa14.58□□□□□ -0.08
HERC1-204ENST00000559715 BBOX1O75936 387 aa14.58□□□□□ -0.08
HERC1-204ENST00000559715 LBX1P52954 281 aa14.58□□□□□ -0.08
HERC1-204ENST00000559715 HIRAP54198 1017 aaPredicted RBP14.58□□□□□ -0.08
HERC1-204ENST00000559715 NECTIN2Q92692 538 aa14.58□□□□□ -0.08
HERC1-204ENST00000559715 ZNRF3Q9ULT6 936 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms