RNA–Protein interactions for RNA: ENST00000559218.1

CLPX-205, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 4

Gene CLPX, Length 533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-205ENST00000559218 TAF7Q15545 349 aaPredicted RBP11.51□□□□□ -0.57
CLPX-205ENST00000559218 SLC51AQ86UW1 340 aa11.51□□□□□ -0.57
CLPX-205ENST00000559218 RTKN2Q8IZC4 609 aa11.51□□□□□ -0.57
CLPX-205ENST00000559218 NGEFQ8N5V2 710 aa11.51□□□□□ -0.57
CLPX-205ENST00000559218 ABCC12Q96J65 1359 aa11.51□□□□□ -0.57
CLPX-205ENST00000559218 ARFGEF2Q9Y6D5 1785 aa11.51□□□□□ -0.57
CLPX-205ENST00000559218 FZD9O00144 591 aa11.5□□□□□ -0.57
CLPX-205ENST00000559218 GTF2E1P29083 439 aaPredicted RBP11.5□□□□□ -0.57
CLPX-205ENST00000559218 IARSP41252 1262 aaKnown RBP11.5□□□□□ -0.57
CLPX-205ENST00000559218 VEGFBP49765 207 aa11.5□□□□□ -0.57
CLPX-205ENST00000559218 NUTM1Q86Y26 1132 aa11.5□□□□□ -0.57
CLPX-205ENST00000559218 SYNE4Q8N205 404 aa11.5□□□□□ -0.57
CLPX-205ENST00000559218 HACL1Q9UJ83 578 aa11.5□□□□□ -0.57
CLPX-205ENST00000559218 RNF123Q5XPI4 1314 aa11.5□□□□□ -0.57
CLPX-205ENST00000559218 TMEM88BA6NKF7 163 aa11.49□□□□□ -0.57
CLPX-205ENST00000559218 ALDH1B1P30837 517 aa11.49□□□□□ -0.57
CLPX-205ENST00000559218 EPHX2P34913 555 aa11.49□□□□□ -0.57
CLPX-205ENST00000559218 CRY2Q49AN0 593 aa11.49□□□□□ -0.57
CLPX-205ENST00000559218 MAP1SQ66K74 1059 aaPredicted RBP11.49□□□□□ -0.57
CLPX-205ENST00000559218 TTLL7Q6ZT98 887 aa11.49□□□□□ -0.57
CLPX-205ENST00000559218 THUMPD2Q9BTF0 503 aaKnown RBP11.49□□□□□ -0.57
CLPX-205ENST00000559218 SNED1Q8TER0 1413 aa11.49□□□□□ -0.57
CLPX-205ENST00000559218 GPTP24298 496 aa11.48□□□□□ -0.57
CLPX-205ENST00000559218 RRP7AQ9Y3A4 280 aaKnown RBP11.48□□□□□ -0.57
CLPX-205ENST00000559218 COL4A5P29400 1685 aa11.48□□□□□ -0.57
CLPX-205ENST00000559218 MAP3K15Q6ZN16 1313 aa11.47□□□□□ -0.57
CLPX-205ENST00000559218 UBN2Q6ZU65 1347 aa11.47□□□□□ -0.57
CLPX-205ENST00000559218 ERVV-1B6SEH8 477 aa11.47□□□□□ -0.57
CLPX-205ENST00000559218 MYL6BP14649 208 aa11.47□□□□□ -0.57
CLPX-205ENST00000559218 EIF4A1P60842 406 aaKnown RBP11.47□□□□□ -0.57
CLPX-205ENST00000559218 C3orf67Q6ZVT6 689 aa11.47□□□□□ -0.57
CLPX-205ENST00000559218 CNTROBQ8N137 903 aa11.47□□□□□ -0.57
CLPX-205ENST00000559218 GPC2Q8N158 579 aa11.47□□□□□ -0.57
CLPX-205ENST00000559218 PSMD1Q99460 953 aa11.47□□□□□ -0.57
CLPX-205ENST00000559218 ZBTB3Q9H5J0 574 aa11.47□□□□□ -0.57
CLPX-205ENST00000559218 SCN4AP35499 1836 aa11.46□□□□□ -0.57
CLPX-205ENST00000559218 TCERG1O14776 1098 aaKnown RBP11.46□□□□□ -0.57
CLPX-205ENST00000559218 PRKAR2AP13861 404 aaKnown RBP11.46□□□□□ -0.57
CLPX-205ENST00000559218 HOXA10P31260 410 aaPredicted RBP11.46□□□□□ -0.57
CLPX-205ENST00000559218 SUSD4Q5VX71 490 aa11.46□□□□□ -0.57
CLPX-205ENST00000559218 KIF6Q6ZMV9 814 aa11.46□□□□□ -0.57
CLPX-205ENST00000559218 PNMA8AQ86V59 439 aaPredicted RBP11.46□□□□□ -0.57
CLPX-205ENST00000559218 JDP2Q8WYK2 163 aa11.46□□□□□ -0.57
CLPX-205ENST00000559218 RPGRQ92834 1020 aaKnown RBP11.46□□□□□ -0.57
CLPX-205ENST00000559218 NYXQ9GZU5 481 aa11.46□□□□□ -0.57
CLPX-205ENST00000559218 GJA3Q9Y6H8 435 aa11.46□□□□□ -0.57
CLPX-205ENST00000559218 ADAMTSL1Q8N6G6 1762 aa11.46□□□□□ -0.58
CLPX-205ENST00000559218 CTCFP49711 727 aaPredicted RBP11.45□□□□□ -0.58
CLPX-205ENST00000559218 FMR1Q06787 632 aaKnown RBP eCLIP11.45□□□□□ -0.58
CLPX-205ENST00000559218 PNISRQ8TF01 805 aaKnown RBP11.45□□□□□ -0.58
CLPX-205ENST00000559218 AIDAQ96BJ3 306 aa11.45□□□□□ -0.58
CLPX-205ENST00000559218 PLEKHF1Q96S99 279 aa11.45□□□□□ -0.58
CLPX-205ENST00000559218 PRDM10Q9NQV6 1147 aa11.45□□□□□ -0.58
CLPX-205ENST00000559218 WBP1LQ9NX94 342 aa11.45□□□□□ -0.58
CLPX-205ENST00000559218 RASSF10A6NK89 507 aa11.44□□□□□ -0.58
CLPX-205ENST00000559218 NTSR2O95665 410 aa11.44□□□□□ -0.58
CLPX-205ENST00000559218 PRR29P0C7W0 189 aa11.44□□□□□ -0.58
CLPX-205ENST00000559218 EPS15P42566 896 aa11.44□□□□□ -0.58
CLPX-205ENST00000559218 SCNN1DP51172 638 aa11.44□□□□□ -0.58
CLPX-205ENST00000559218 LBX1P52954 281 aa11.44□□□□□ -0.58
CLPX-205ENST00000559218 NFE2L2Q16236 605 aa11.44□□□□□ -0.58
CLPX-205ENST00000559218 CC2D2BQ6DHV5 1058 aa11.44□□□□□ -0.58
CLPX-205ENST00000559218 ZNF34Q8IZ26 560 aa11.44□□□□□ -0.58
CLPX-205ENST00000559218 LARGE2Q8N3Y3 721 aa11.44□□□□□ -0.58
CLPX-205ENST00000559218 IBTKQ9P2D0 1353 aaPredicted RBP11.43□□□□□ -0.58
CLPX-205ENST00000559218 PPEF1O14829 653 aaPredicted RBP11.43□□□□□ -0.58
CLPX-205ENST00000559218 EIF6P56537 245 aaKnown RBP11.43□□□□□ -0.58
CLPX-205ENST00000559218 DEFB115Q30KQ5 88 aa11.43□□□□□ -0.58
CLPX-205ENST00000559218 RBM17Q96I25 401 aaKnown RBP11.43□□□□□ -0.58
CLPX-205ENST00000559218 CRAMP1Q96RY5 1269 aa11.43□□□□□ -0.58
CLPX-205ENST00000559218 DDX21Q9NR30 783 aaKnown RBP eCLIP11.43□□□□□ -0.58
CLPX-205ENST00000559218 ABT1Q9ULW3 272 aaKnown RBP11.43□□□□□ -0.58
CLPX-205ENST00000559218 LAMB4A4D0S4 1761 aa11.43□□□□□ -0.58
CLPX-205ENST00000559218 LTBP1Q14766 1721 aa11.43□□□□□ -0.58
CLPX-205ENST00000559218 RIC1Q4ADV7 1423 aa11.43□□□□□ -0.58
CLPX-205ENST00000559218 WDR33Q9C0J8 1336 aaKnown RBP11.42□□□□□ -0.58
CLPX-205ENST00000559218 KDM3BQ7LBC6 1761 aa11.42□□□□□ -0.58
CLPX-205ENST00000559218 TRAF5O00463 557 aa11.42□□□□□ -0.58
CLPX-205ENST00000559218 NEFMP07197 916 aa11.42□□□□□ -0.58
CLPX-205ENST00000559218 LMOD1P29536 600 aaPredicted RBP11.42□□□□□ -0.58
CLPX-205ENST00000559218 PROSER3Q2NL68 480 aa11.42□□□□□ -0.58
CLPX-205ENST00000559218 GIGYF2Q6Y7W6 1299 aaKnown RBP11.42□□□□□ -0.58
CLPX-205ENST00000559218 LRP10Q7Z4F1 713 aa11.42□□□□□ -0.58
CLPX-205ENST00000559218 ANXA1P04083 346 aa11.41□□□□□ -0.58
CLPX-205ENST00000559218 HSPA8P11142 646 aaKnown RBP11.41□□□□□ -0.58
CLPX-205ENST00000559218 PDIA6Q15084 440 aa11.41□□□□□ -0.58
CLPX-205ENST00000559218 AOC3Q16853 763 aa11.41□□□□□ -0.58
CLPX-205ENST00000559218 NUP98P52948 1817 aa11.4□□□□□ -0.58
CLPX-205ENST00000559218 PPIP5K2O43314 1243 aa11.4□□□□□ -0.58
CLPX-205ENST00000559218 EIF2S2P20042 333 aaKnown RBP11.4□□□□□ -0.58
CLPX-205ENST00000559218 GRIPAP1Q4V328 841 aa11.4□□□□□ -0.58
CLPX-205ENST00000559218 CST9Q5W186 159 aa11.4□□□□□ -0.58
CLPX-205ENST00000559218 NIM1KQ8IY84 436 aa11.4□□□□□ -0.58
CLPX-205ENST00000559218 UTP14AQ9BVJ6 771 aaKnown RBP11.4□□□□□ -0.58
CLPX-205ENST00000559218 TSPYL4Q9UJ04 414 aa11.4□□□□□ -0.58
CLPX-205ENST00000559218 ATP6V0A2Q9Y487 856 aa11.4□□□□□ -0.58
CLPX-205ENST00000559218 ABCC4O15439 1325 aa11.39□□□□□ -0.59
CLPX-205ENST00000559218 ERBB4Q15303 1308 aa11.39□□□□□ -0.59
CLPX-205ENST00000559218 MAPK8IP3Q9UPT6 1336 aa11.39□□□□□ -0.59
CLPX-205ENST00000559218 CXCL9Q07325 125 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms