RNA–Protein interactions for RNA: ENST00000558968.1

CTDSPL2-205, Transcript of CTD small phosphatase like 2, humanhuman

TSL 5

Gene CTDSPL2, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-205ENST00000558968 C3orf67Q6ZVT6 689 aa13.54□□□□□ -0.24
CTDSPL2-205ENST00000558968 SLC51AQ86UW1 340 aa13.54□□□□□ -0.24
CTDSPL2-205ENST00000558968 RTKN2Q8IZC4 609 aa13.54□□□□□ -0.24
CTDSPL2-205ENST00000558968 RPGRQ92834 1020 aaKnown RBP13.54□□□□□ -0.24
CTDSPL2-205ENST00000558968 KLRG1Q96E93 195 aa13.54□□□□□ -0.24
CTDSPL2-205ENST00000558968 RIC1Q4ADV7 1423 aa13.54□□□□□ -0.24
CTDSPL2-205ENST00000558968 POTEIP0CG38 1075 aa13.53□□□□□ -0.24
CTDSPL2-205ENST00000558968 POTEJP0CG39 1038 aa13.53□□□□□ -0.24
CTDSPL2-205ENST00000558968 AIMP1Q12904 312 aaKnown RBP13.53□□□□□ -0.24
CTDSPL2-205ENST00000558968 SYNE4Q8N205 404 aa13.53□□□□□ -0.24
CTDSPL2-205ENST00000558968 ZNF541Q9H0D2 1346 aa13.53□□□□□ -0.24
CTDSPL2-205ENST00000558968 SNED1Q8TER0 1413 aa13.53□□□□□ -0.24
CTDSPL2-205ENST00000558968 CHL1O00533 1208 aa13.52□□□□□ -0.25
CTDSPL2-205ENST00000558968 TCERG1O14776 1098 aaKnown RBP13.52□□□□□ -0.25
CTDSPL2-205ENST00000558968 IARSP41252 1262 aaKnown RBP13.52□□□□□ -0.25
CTDSPL2-205ENST00000558968 COPS6Q7L5N1 327 aa13.52□□□□□ -0.25
CTDSPL2-205ENST00000558968 PPP1R42Q7Z4L9 355 aa13.52□□□□□ -0.25
CTDSPL2-205ENST00000558968 XAGE3Q8WTP9 111 aa13.52□□□□□ -0.25
CTDSPL2-205ENST00000558968 PRKRIP1Q9H875 184 aaPredicted RBP13.52□□□□□ -0.25
CTDSPL2-205ENST00000558968 COL4A5P29400 1685 aa13.52□□□□□ -0.25
CTDSPL2-205ENST00000558968 DDX60Q8IY21 1712 aaKnown RBP13.51□□□□□ -0.25
CTDSPL2-205ENST00000558968 HOXA10P31260 410 aaPredicted RBP13.51□□□□□ -0.25
CTDSPL2-205ENST00000558968 PARP10Q53GL7 1025 aa13.51□□□□□ -0.25
CTDSPL2-205ENST00000558968 ZNF428Q96B54 188 aa13.51□□□□□ -0.25
CTDSPL2-205ENST00000558968 RBM17Q96I25 401 aaKnown RBP13.51□□□□□ -0.25
CTDSPL2-205ENST00000558968 UTP14AQ9BVJ6 771 aaKnown RBP13.51□□□□□ -0.25
CTDSPL2-205ENST00000558968 PPEF1O14829 653 aaPredicted RBP13.5□□□□□ -0.25
CTDSPL2-205ENST00000558968 CHPF2Q9P2E5 772 aa13.5□□□□□ -0.25
CTDSPL2-205ENST00000558968 IFFO2Q5TF58 517 aa13.49□□□□□ -0.25
CTDSPL2-205ENST00000558968 CHADLQ6NUI6 762 aa13.49□□□□□ -0.25
CTDSPL2-205ENST00000558968 L3MBTL3Q96JM7 780 aaPredicted RBP13.49□□□□□ -0.25
CTDSPL2-205ENST00000558968 NLRP3Q96P20 1036 aa13.49□□□□□ -0.25
CTDSPL2-205ENST00000558968 CRAMP1Q96RY5 1269 aa13.49□□□□□ -0.25
CTDSPL2-205ENST00000558968 PSMD1Q99460 953 aa13.49□□□□□ -0.25
CTDSPL2-205ENST00000558968 TAF1DQ9H5J8 278 aaPredicted RBP13.49□□□□□ -0.25
CTDSPL2-205ENST00000558968 DDX21Q9NR30 783 aaKnown RBP eCLIP13.49□□□□□ -0.25
CTDSPL2-205ENST00000558968 ADAMTSL1Q8N6G6 1762 aa13.48□□□□□ -0.25
CTDSPL2-205ENST00000558968 LTBP1Q14766 1721 aa13.48□□□□□ -0.25
CTDSPL2-205ENST00000558968 IQCA1LA6NCM1 817 aa13.48□□□□□ -0.25
CTDSPL2-205ENST00000558968 FZD9O00144 591 aa13.48□□□□□ -0.25
CTDSPL2-205ENST00000558968 HCLS1P14317 486 aaPredicted RBP13.48□□□□□ -0.25
CTDSPL2-205ENST00000558968 EAPPQ56P03 285 aaPredicted RBP13.48□□□□□ -0.25
CTDSPL2-205ENST00000558968 HSP90AB3PQ58FF7 597 aa13.48□□□□□ -0.25
CTDSPL2-205ENST00000558968 HDGFL1Q5TGJ6 251 aa13.48□□□□□ -0.25
CTDSPL2-205ENST00000558968 CC2D2BQ6DHV5 1058 aa13.48□□□□□ -0.25
CTDSPL2-205ENST00000558968 NLRP10Q86W26 655 aa13.48□□□□□ -0.25
CTDSPL2-205ENST00000558968 JMYQ8N9B5 988 aa13.48□□□□□ -0.25
CTDSPL2-205ENST00000558968 ABCC4O15439 1325 aa13.47□□□□□ -0.25
CTDSPL2-205ENST00000558968 RNF123Q5XPI4 1314 aa13.47□□□□□ -0.25
CTDSPL2-205ENST00000558968 APAF1O14727 1248 aa13.47□□□□□ -0.25
CTDSPL2-205ENST00000558968 TCIRG1Q13488 830 aa13.47□□□□□ -0.25
CTDSPL2-205ENST00000558968 SLC10A5Q5PT55 438 aa13.47□□□□□ -0.25
CTDSPL2-205ENST00000558968 JDP2Q8WYK2 163 aa13.47□□□□□ -0.25
CTDSPL2-205ENST00000558968 CFAP44Q96MT7 982 aa13.47□□□□□ -0.25
CTDSPL2-205ENST00000558968 TRMT112Q9UI30 125 aaKnown RBP13.47□□□□□ -0.25
CTDSPL2-205ENST00000558968 DUSP27Q5VZP5 1158 aa13.46□□□□□ -0.25
CTDSPL2-205ENST00000558968 LDHDQ86WU2 507 aa13.46□□□□□ -0.25
CTDSPL2-205ENST00000558968 LARGE2Q8N3Y3 721 aa13.46□□□□□ -0.25
CTDSPL2-205ENST00000558968 MBIPQ9NS73 344 aa13.46□□□□□ -0.25
CTDSPL2-205ENST00000558968 HACL1Q9UJ83 578 aa13.46□□□□□ -0.25
CTDSPL2-205ENST00000558968 GJA3Q9Y6H8 435 aa13.46□□□□□ -0.25
CTDSPL2-205ENST00000558968 HOXB7P09629 217 aa13.45□□□□□ -0.26
CTDSPL2-205ENST00000558968 EPHX2P34913 555 aa13.45□□□□□ -0.26
CTDSPL2-205ENST00000558968 EIF6P56537 245 aaKnown RBP13.45□□□□□ -0.26
CTDSPL2-205ENST00000558968 GPC2Q8N158 579 aa13.45□□□□□ -0.26
CTDSPL2-205ENST00000558968 DBF4Q9UBU7 674 aaPredicted RBP13.45□□□□□ -0.26
CTDSPL2-205ENST00000558968 CLEC11AQ9Y240 323 aa13.45□□□□□ -0.26
CTDSPL2-205ENST00000558968 SH3TC1Q8TE82 1336 aa13.44□□□□□ -0.26
CTDSPL2-205ENST00000558968 ATP5J2-PTCD1G3V325 749 aa13.44□□□□□ -0.26
CTDSPL2-205ENST00000558968 ZNF853P0CG23 659 aa13.44□□□□□ -0.26
CTDSPL2-205ENST00000558968 AOC3Q16853 763 aa13.44□□□□□ -0.26
CTDSPL2-205ENST00000558968 GRIPAP1Q4V328 841 aa13.44□□□□□ -0.26
CTDSPL2-205ENST00000558968 ANKRD13DQ6ZTN6 518 aa13.44□□□□□ -0.26
CTDSPL2-205ENST00000558968 PLBD2Q8NHP8 589 aa13.44□□□□□ -0.26
CTDSPL2-205ENST00000558968 ATP6V0A2Q9Y487 856 aa13.44□□□□□ -0.26
CTDSPL2-205ENST00000558968 LRRC37AA6NMS7 1700 aa13.44□□□□□ -0.26
CTDSPL2-205ENST00000558968 COL4A1P02462 1669 aa13.44□□□□□ -0.26
CTDSPL2-205ENST00000558968 ELL2O00472 640 aaPredicted RBP13.43□□□□□ -0.26
CTDSPL2-205ENST00000558968 PPIP5K2O43314 1243 aa13.43□□□□□ -0.26
CTDSPL2-205ENST00000558968 CCDC184Q52MB2 194 aa13.43□□□□□ -0.26
CTDSPL2-205ENST00000558968 TRPM7Q96QT4 1865 aa13.43□□□□□ -0.26
CTDSPL2-205ENST00000558968 TMX4Q9H1E5 349 aaPredicted RBP13.43□□□□□ -0.26
CTDSPL2-205ENST00000558968 CREBZFQ9NS37 354 aa13.43□□□□□ -0.26
CTDSPL2-205ENST00000558968 IFT57Q9NWB7 429 aa13.43□□□□□ -0.26
CTDSPL2-205ENST00000558968 MKRN1Q9UHC7 482 aaKnown RBP13.43□□□□□ -0.26
CTDSPL2-205ENST00000558968 PASKQ96RG2 1323 aa13.42□□□□□ -0.26
CTDSPL2-205ENST00000558968 RTL5Q5HYW3 569 aaPredicted RBP13.42□□□□□ -0.26
CTDSPL2-205ENST00000558968 MAP1SQ66K74 1059 aaPredicted RBP13.42□□□□□ -0.26
CTDSPL2-205ENST00000558968 DDX46Q7L014 1031 aaKnown RBP13.42□□□□□ -0.26
CTDSPL2-205ENST00000558968 NIM1KQ8IY84 436 aa13.42□□□□□ -0.26
CTDSPL2-205ENST00000558968 FAM89AQ96GI7 184 aa13.42□□□□□ -0.26
CTDSPL2-205ENST00000558968 ISCA1Q9BUE6 129 aa13.42□□□□□ -0.26
CTDSPL2-205ENST00000558968 HYPKQ9NX55 129 aa13.42□□□□□ -0.26
CTDSPL2-205ENST00000558968 BBOX1O75936 387 aa13.41□□□□□ -0.26
CTDSPL2-205ENST00000558968 ITGBL1O95965 494 aaPredicted RBP13.41□□□□□ -0.26
CTDSPL2-205ENST00000558968 SCNN1DP51172 638 aa13.41□□□□□ -0.26
CTDSPL2-205ENST00000558968 GNAI1P63096 354 aa13.41□□□□□ -0.26
CTDSPL2-205ENST00000558968 GRAPQ13588 217 aa13.41□□□□□ -0.26
CTDSPL2-205ENST00000558968 DPP8Q6V1X1 898 aaPredicted RBP13.41□□□□□ -0.26
CTDSPL2-205ENST00000558968 SP8Q8IXZ3 490 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms