RNA–Protein interactions for RNA: ENST00000558848.1

SEMA4B-205, Transcript of semaphorin 4B, humanhuman

TSL 2

Gene SEMA4B, Length 639 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-205ENST00000558848 GPTP24298 496 aa15.52■□□□□ 0.08
SEMA4B-205ENST00000558848 IARSP41252 1262 aaKnown RBP15.52■□□□□ 0.08
SEMA4B-205ENST00000558848 LMOD3Q0VAK6 560 aa15.52■□□□□ 0.08
SEMA4B-205ENST00000558848 PROSER3Q2NL68 480 aa15.52■□□□□ 0.08
SEMA4B-205ENST00000558848 GRIPAP1Q4V328 841 aa15.52■□□□□ 0.08
SEMA4B-205ENST00000558848 PARP10Q53GL7 1025 aa15.52■□□□□ 0.08
SEMA4B-205ENST00000558848 SYNE4Q8N205 404 aa15.52■□□□□ 0.08
SEMA4B-205ENST00000558848 PASKQ96RG2 1323 aa15.51■□□□□ 0.07
SEMA4B-205ENST00000558848 C3orf67Q6ZVT6 689 aa15.51■□□□□ 0.07
SEMA4B-205ENST00000558848 TRIM35Q9UPQ4 493 aa15.51■□□□□ 0.07
SEMA4B-205ENST00000558848 SCN4AP35499 1836 aa15.51■□□□□ 0.07
SEMA4B-205ENST00000558848 PPP1R42Q7Z4L9 355 aa15.5■□□□□ 0.07
SEMA4B-205ENST00000558848 LDHDQ86WU2 507 aa15.5■□□□□ 0.07
SEMA4B-205ENST00000558848 CREBZFQ9NS37 354 aa15.5■□□□□ 0.07
SEMA4B-205ENST00000558848 COL4A5P29400 1685 aa15.5■□□□□ 0.07
SEMA4B-205ENST00000558848 ADAMTSL1Q8N6G6 1762 aa15.49■□□□□ 0.07
SEMA4B-205ENST00000558848 RNF123Q5XPI4 1314 aa15.49■□□□□ 0.07
SEMA4B-205ENST00000558848 ITGBL1O95965 494 aaPredicted RBP15.49■□□□□ 0.07
SEMA4B-205ENST00000558848 DDX10Q13206 875 aaKnown RBP15.49■□□□□ 0.07
SEMA4B-205ENST00000558848 ANXA1P04083 346 aa15.48■□□□□ 0.07
SEMA4B-205ENST00000558848 EIF2S2P20042 333 aaKnown RBP15.48■□□□□ 0.07
SEMA4B-205ENST00000558848 SLC51AQ86UW1 340 aa15.48■□□□□ 0.07
SEMA4B-205ENST00000558848 GPC2Q8N158 579 aa15.48■□□□□ 0.07
SEMA4B-205ENST00000558848 RPGRQ92834 1020 aaKnown RBP15.48■□□□□ 0.07
SEMA4B-205ENST00000558848 RUNDC1Q96C34 613 aa15.48■□□□□ 0.07
SEMA4B-205ENST00000558848 RBM17Q96I25 401 aaKnown RBP15.48■□□□□ 0.07
SEMA4B-205ENST00000558848 DDX21Q9NR30 783 aaKnown RBP eCLIP15.48■□□□□ 0.07
SEMA4B-205ENST00000558848 HACL1Q9UJ83 578 aa15.48■□□□□ 0.07
SEMA4B-205ENST00000558848 COL13A1Q5TAT6 717 aaPredicted RBP15.47■□□□□ 0.07
SEMA4B-205ENST00000558848 COPS6Q7L5N1 327 aa15.47■□□□□ 0.07
SEMA4B-205ENST00000558848 NLRP10Q86W26 655 aa15.47■□□□□ 0.07
SEMA4B-205ENST00000558848 NLRP3Q96P20 1036 aa15.47■□□□□ 0.07
SEMA4B-205ENST00000558848 UTP14AQ9BVJ6 771 aaKnown RBP15.47■□□□□ 0.07
SEMA4B-205ENST00000558848 PPEF1O14829 653 aaPredicted RBP15.46■□□□□ 0.07
SEMA4B-205ENST00000558848 HOXB7P09629 217 aa15.46■□□□□ 0.07
SEMA4B-205ENST00000558848 EPHX2P34913 555 aa15.46■□□□□ 0.07
SEMA4B-205ENST00000558848 KRT24Q2M2I5 525 aa15.46■□□□□ 0.07
SEMA4B-205ENST00000558848 CCDC146Q8IYE0 955 aa15.46■□□□□ 0.07
SEMA4B-205ENST00000558848 XAGE3Q8WTP9 111 aa15.46■□□□□ 0.07
SEMA4B-205ENST00000558848 VPS33BQ9H267 617 aa15.46■□□□□ 0.07
SEMA4B-205ENST00000558848 ADAMTS8Q9UP79 889 aa15.46■□□□□ 0.07
SEMA4B-205ENST00000558848 ATP6V0A2Q9Y487 856 aa15.46■□□□□ 0.07
SEMA4B-205ENST00000558848 TCIRG1Q13488 830 aa15.45■□□□□ 0.06
SEMA4B-205ENST00000558848 HSP90AB3PQ58FF7 597 aa15.45■□□□□ 0.06
SEMA4B-205ENST00000558848 PNMA8AQ86V59 439 aaPredicted RBP15.45■□□□□ 0.06
SEMA4B-205ENST00000558848 JDP2Q8WYK2 163 aa15.45■□□□□ 0.06
SEMA4B-205ENST00000558848 RTFDC1Q9BY42 306 aaPredicted RBP15.45■□□□□ 0.06
SEMA4B-205ENST00000558848 ABCC4O15439 1325 aa15.43■□□□□ 0.06
SEMA4B-205ENST00000558848 BBOX1O75936 387 aa15.43■□□□□ 0.06
SEMA4B-205ENST00000558848 ZNF853P0CG23 659 aa15.43■□□□□ 0.06
SEMA4B-205ENST00000558848 HSPA1AP0DMV8 641 aaKnown RBP15.43■□□□□ 0.06
SEMA4B-205ENST00000558848 HSPA1BP0DMV9 641 aaKnown RBP15.43■□□□□ 0.06
SEMA4B-205ENST00000558848 SCNN1DP51172 638 aa15.43■□□□□ 0.06
SEMA4B-205ENST00000558848 NEUROD2Q15784 382 aa15.43■□□□□ 0.06
SEMA4B-205ENST00000558848 CFAP44Q96MT7 982 aa15.43■□□□□ 0.06
SEMA4B-205ENST00000558848 PRKRIP1Q9H875 184 aaPredicted RBP15.43■□□□□ 0.06
SEMA4B-205ENST00000558848 CNTNAP1P78357 1384 aa15.43■□□□□ 0.06
SEMA4B-205ENST00000558848 LTBP1Q14766 1721 aa15.43■□□□□ 0.06
SEMA4B-205ENST00000558848 EIF6P56537 245 aaKnown RBP15.42■□□□□ 0.06
SEMA4B-205ENST00000558848 AIMP1Q12904 312 aaKnown RBP15.42■□□□□ 0.06
SEMA4B-205ENST00000558848 SP8Q8IXZ3 490 aa15.42■□□□□ 0.06
SEMA4B-205ENST00000558848 NECTIN2Q92692 538 aa15.42■□□□□ 0.06
SEMA4B-205ENST00000558848 CHPF2Q9P2E5 772 aa15.42■□□□□ 0.06
SEMA4B-205ENST00000558848 ANKRD36CQ5JPF3 1778 aa15.41■□□□□ 0.06
SEMA4B-205ENST00000558848 TMEM88BA6NKF7 163 aa15.41■□□□□ 0.06
SEMA4B-205ENST00000558848 WDR43Q15061 677 aaKnown RBP eCLIP15.41■□□□□ 0.06
SEMA4B-205ENST00000558848 EAPPQ56P03 285 aaPredicted RBP15.41■□□□□ 0.06
SEMA4B-205ENST00000558848 CNTROBQ8N137 903 aa15.41■□□□□ 0.06
SEMA4B-205ENST00000558848 LARGE2Q8N3Y3 721 aa15.41■□□□□ 0.06
SEMA4B-205ENST00000558848 PLBD2Q8NHP8 589 aa15.41■□□□□ 0.06
SEMA4B-205ENST00000558848 ISCA1Q9BUE6 129 aa15.41■□□□□ 0.06
SEMA4B-205ENST00000558848 MKRN1Q9UHC7 482 aaKnown RBP15.41■□□□□ 0.06
SEMA4B-205ENST00000558848 SH3TC1Q8TE82 1336 aa15.41■□□□□ 0.06
SEMA4B-205ENST00000558848 HCLS1P14317 486 aaPredicted RBP15.4■□□□□ 0.06
SEMA4B-205ENST00000558848 TRIM28Q13263 835 aaKnown RBP15.4■□□□□ 0.06
SEMA4B-205ENST00000558848 HDGFL1Q5TGJ6 251 aa15.4■□□□□ 0.06
SEMA4B-205ENST00000558848 DBF4Q9UBU7 674 aaPredicted RBP15.4■□□□□ 0.06
SEMA4B-205ENST00000558848 TRMT112Q9UI30 125 aaKnown RBP15.4■□□□□ 0.06
SEMA4B-205ENST00000558848 TCERG1O14776 1098 aaKnown RBP15.39■□□□□ 0.05
SEMA4B-205ENST00000558848 EPS15P42566 896 aa15.39■□□□□ 0.05
SEMA4B-205ENST00000558848 GRAPQ13588 217 aa15.39■□□□□ 0.05
SEMA4B-205ENST00000558848 AOC3Q16853 763 aa15.39■□□□□ 0.05
SEMA4B-205ENST00000558848 MAP1SQ66K74 1059 aaPredicted RBP15.39■□□□□ 0.05
SEMA4B-205ENST00000558848 ANKRD13DQ6ZTN6 518 aa15.39■□□□□ 0.05
SEMA4B-205ENST00000558848 GRAPLQ8TC17 118 aaPredicted RBP15.39■□□□□ 0.05
SEMA4B-205ENST00000558848 MBIPQ9NS73 344 aa15.39■□□□□ 0.05
SEMA4B-205ENST00000558848 LAMB2P55268 1798 aa15.39■□□□□ 0.05
SEMA4B-205ENST00000558848 RASSF10A6NK89 507 aa15.38■□□□□ 0.05
SEMA4B-205ENST00000558848 PPIP5K2O43314 1243 aa15.38■□□□□ 0.05
SEMA4B-205ENST00000558848 KIAA2012Q0VF49 1180 aa15.38■□□□□ 0.05
SEMA4B-205ENST00000558848 SF3B3Q15393 1217 aaKnown RBP15.38■□□□□ 0.05
SEMA4B-205ENST00000558848 DUSP27Q5VZP5 1158 aa15.38■□□□□ 0.05
SEMA4B-205ENST00000558848 USP50Q70EL3 339 aaPredicted RBP15.38■□□□□ 0.05
SEMA4B-205ENST00000558848 NIM1KQ8IY84 436 aa15.38■□□□□ 0.05
SEMA4B-205ENST00000558848 SUPT20HQ8NEM7 779 aa15.38■□□□□ 0.05
SEMA4B-205ENST00000558848 HYPKQ9NX55 129 aa15.38■□□□□ 0.05
SEMA4B-205ENST00000558848 ZNRF3Q9ULT6 936 aa15.38■□□□□ 0.05
SEMA4B-205ENST00000558848 LAS1LQ9Y4W2 734 aaKnown RBP15.38■□□□□ 0.05
SEMA4B-205ENST00000558848 GJA3Q9Y6H8 435 aa15.38■□□□□ 0.05
SEMA4B-205ENST00000558848 VEGFBP49765 207 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms