RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 NUTM1Q86Y26 1132 aa15.13■□□□□ 0.01
CASC4-205ENST00000558735 ZBTB3Q9H5J0 574 aa15.13■□□□□ 0.01
CASC4-205ENST00000558735 TRIM35Q9UPQ4 493 aa15.13■□□□□ 0.01
CASC4-205ENST00000558735 ZNF541Q9H0D2 1346 aa15.13■□□□□ 0.01
CASC4-205ENST00000558735 KDM3BQ7LBC6 1761 aa15.12■□□□□ 0.01
CASC4-205ENST00000558735 CHL1O00533 1208 aa15.12■□□□□ 0.01
CASC4-205ENST00000558735 GPTP24298 496 aa15.12■□□□□ 0.01
CASC4-205ENST00000558735 EPHX2P34913 555 aa15.12■□□□□ 0.01
CASC4-205ENST00000558735 LBX1P52954 281 aa15.12■□□□□ 0.01
CASC4-205ENST00000558735 MAP2K1Q02750 393 aaPredicted RBP15.12■□□□□ 0.01
CASC4-205ENST00000558735 DEFB115Q30KQ5 88 aa15.12■□□□□ 0.01
CASC4-205ENST00000558735 SUSD4Q5VX71 490 aa15.12■□□□□ 0.01
CASC4-205ENST00000558735 OLFM4Q6UX06 510 aa15.12■□□□□ 0.01
CASC4-205ENST00000558735 KIF6Q6ZMV9 814 aa15.12■□□□□ 0.01
CASC4-205ENST00000558735 ZNF34Q8IZ26 560 aa15.12■□□□□ 0.01
CASC4-205ENST00000558735 RUNDC1Q96C34 613 aa15.12■□□□□ 0.01
CASC4-205ENST00000558735 ERBB4Q15303 1308 aa15.12■□□□□ 0.01
CASC4-205ENST00000558735 SNED1Q8TER0 1413 aa15.11■□□□□ 0.01
CASC4-205ENST00000558735 ANXA1P04083 346 aa15.11■□□□□ 0.01
CASC4-205ENST00000558735 HSPA8P11142 646 aaKnown RBP15.11■□□□□ 0.01
CASC4-205ENST00000558735 ALDH1B1P30837 517 aa15.11■□□□□ 0.01
CASC4-205ENST00000558735 LMOD3Q0VAK6 560 aa15.11■□□□□ 0.01
CASC4-205ENST00000558735 PROSER3Q2NL68 480 aa15.11■□□□□ 0.01
CASC4-205ENST00000558735 GIGYF2Q6Y7W6 1299 aaKnown RBP15.11■□□□□ 0.01
CASC4-205ENST00000558735 CNTROBQ8N137 903 aa15.11■□□□□ 0.01
CASC4-205ENST00000558735 GPC2Q8N158 579 aa15.11■□□□□ 0.01
CASC4-205ENST00000558735 NYXQ9GZU5 481 aa15.11■□□□□ 0.01
CASC4-205ENST00000558735 PRKRIP1Q9H875 184 aaPredicted RBP15.11■□□□□ 0.01
CASC4-205ENST00000558735 ZNF277Q9NRM2 450 aaPredicted RBP15.11■□□□□ 0.01
CASC4-205ENST00000558735 UBN2Q6ZU65 1347 aa15.11■□□□□ 0.01
CASC4-205ENST00000558735 CRY2Q49AN0 593 aa15.1■□□□□ 0.01
CASC4-205ENST00000558735 EAPPQ56P03 285 aaPredicted RBP15.1■□□□□ 0.01
CASC4-205ENST00000558735 ABHD8Q96I13 439 aa15.1■□□□□ 0.01
CASC4-205ENST00000558735 PSMD1Q99460 953 aa15.1■□□□□ 0.01
CASC4-205ENST00000558735 WDR33Q9C0J8 1336 aaKnown RBP15.1■□□□□ 0.01
CASC4-205ENST00000558735 IARSP41252 1262 aaKnown RBP15.09■□□□□ 0.01
CASC4-205ENST00000558735 WDR43Q15061 677 aaKnown RBP eCLIP15.09■□□□□ 0.01
CASC4-205ENST00000558735 KRT24Q2M2I5 525 aa15.09■□□□□ 0.01
CASC4-205ENST00000558735 NECTIN2Q92692 538 aa15.09■□□□□ 0.01
CASC4-205ENST00000558735 NTSR2O95665 410 aa15.08■□□□□ 0
CASC4-205ENST00000558735 HOXA10P31260 410 aaPredicted RBP15.08■□□□□ 0
CASC4-205ENST00000558735 MAP1SQ66K74 1059 aaPredicted RBP15.08■□□□□ 0
CASC4-205ENST00000558735 COPS6Q7L5N1 327 aa15.08■□□□□ 0
CASC4-205ENST00000558735 CLEC11AQ9Y240 323 aa15.08■□□□□ 0
CASC4-205ENST00000558735 ABCC12Q96J65 1359 aa15.08■□□□□ 0
CASC4-205ENST00000558735 THSD7BQ9C0I4 1608 aa15.07■□□□□ 0
CASC4-205ENST00000558735 RGS19P49795 217 aa15.07■□□□□ 0
CASC4-205ENST00000558735 CC2D2BQ6DHV5 1058 aa15.07■□□□□ 0
CASC4-205ENST00000558735 SYNE4Q8N205 404 aa15.07■□□□□ 0
CASC4-205ENST00000558735 DDX21Q9NR30 783 aaKnown RBP eCLIP15.07■□□□□ 0
CASC4-205ENST00000558735 LAS1LQ9Y4W2 734 aaKnown RBP15.07■□□□□ 0
CASC4-205ENST00000558735 RNF123Q5XPI4 1314 aa15.07■□□□□ 0
CASC4-205ENST00000558735 CACNA1SQ13698 1873 aa15.07■□□□□ 0
CASC4-205ENST00000558735 LAMB4A4D0S4 1761 aa15.06■□□□□ 0
CASC4-205ENST00000558735 NUP98P52948 1817 aa15.06■□□□□ 0
CASC4-205ENST00000558735 AIMP1Q12904 312 aaKnown RBP15.06■□□□□ 0
CASC4-205ENST00000558735 GRIPAP1Q4V328 841 aa15.06■□□□□ 0
CASC4-205ENST00000558735 PARP10Q53GL7 1025 aa15.06■□□□□ 0
CASC4-205ENST00000558735 SLC10A5Q5PT55 438 aa15.06■□□□□ 0
CASC4-205ENST00000558735 C3orf67Q6ZVT6 689 aa15.06■□□□□ 0
CASC4-205ENST00000558735 PPP1R42Q7Z4L9 355 aa15.06■□□□□ 0
CASC4-205ENST00000558735 XAGE3Q8WTP9 111 aa15.06■□□□□ 0
CASC4-205ENST00000558735 RPGRQ92834 1020 aaKnown RBP15.05■□□□□ -0
CASC4-205ENST00000558735 CRAMP1Q96RY5 1269 aa15.05■□□□□ -0
CASC4-205ENST00000558735 RIC1Q4ADV7 1423 aa15.04■□□□□ -0
CASC4-205ENST00000558735 IBTKQ9P2D0 1353 aaPredicted RBP15.04■□□□□ -0
CASC4-205ENST00000558735 ECE1P42892 770 aa15.04■□□□□ -0
CASC4-205ENST00000558735 TCIRG1Q13488 830 aa15.04■□□□□ -0
CASC4-205ENST00000558735 FAM161AQ3B820 660 aa15.04■□□□□ -0
CASC4-205ENST00000558735 JDP2Q8WYK2 163 aa15.04■□□□□ -0
CASC4-205ENST00000558735 CFAP44Q96MT7 982 aa15.04■□□□□ -0
CASC4-205ENST00000558735 UTP14AQ9BVJ6 771 aaKnown RBP15.04■□□□□ -0
CASC4-205ENST00000558735 ABT1Q9ULW3 272 aaKnown RBP15.04■□□□□ -0
CASC4-205ENST00000558735 APAF1O14727 1248 aa15.03■□□□□ -0
CASC4-205ENST00000558735 SLC51AQ86UW1 340 aa15.03■□□□□ -0
CASC4-205ENST00000558735 RBM17Q96I25 401 aaKnown RBP15.03■□□□□ -0
CASC4-205ENST00000558735 NLRP3Q96P20 1036 aa15.03■□□□□ -0
CASC4-205ENST00000558735 TCERG1O14776 1098 aaKnown RBP15.02■□□□□ -0
CASC4-205ENST00000558735 ZNF853P0CG23 659 aa15.02■□□□□ -0
CASC4-205ENST00000558735 SCNN1DP51172 638 aa15.02■□□□□ -0
CASC4-205ENST00000558735 EIF6P56537 245 aaKnown RBP15.02■□□□□ -0
CASC4-205ENST00000558735 CST9Q5W186 159 aa15.02■□□□□ -0
CASC4-205ENST00000558735 USP50Q70EL3 339 aaPredicted RBP15.02■□□□□ -0
CASC4-205ENST00000558735 NLRP10Q86W26 655 aa15.02■□□□□ -0
CASC4-205ENST00000558735 CAPNS2Q96L46 248 aa15.02■□□□□ -0
CASC4-205ENST00000558735 CHPF2Q9P2E5 772 aa15.02■□□□□ -0
CASC4-205ENST00000558735 COL4A5P29400 1685 aa15.02□□□□□ -0.01
CASC4-205ENST00000558735 LTBP1Q14766 1721 aa15.01□□□□□ -0.01
CASC4-205ENST00000558735 MAP2K2P36507 400 aa15.01□□□□□ -0.01
CASC4-205ENST00000558735 HSP90AB3PQ58FF7 597 aa15.01□□□□□ -0.01
CASC4-205ENST00000558735 DUSP27Q5VZP5 1158 aa15.01□□□□□ -0.01
CASC4-205ENST00000558735 GPR101Q96P66 508 aaPredicted RBP15.01□□□□□ -0.01
CASC4-205ENST00000558735 MBIPQ9NS73 344 aa15.01□□□□□ -0.01
CASC4-205ENST00000558735 TLL2Q9Y6L7 1015 aa15.01□□□□□ -0.01
CASC4-205ENST00000558735 HOXB7P09629 217 aa15□□□□□ -0.01
CASC4-205ENST00000558735 HCLS1P14317 486 aaPredicted RBP15□□□□□ -0.01
CASC4-205ENST00000558735 LMOD1P29536 600 aaPredicted RBP15□□□□□ -0.01
CASC4-205ENST00000558735 EPS15P42566 896 aa15□□□□□ -0.01
CASC4-205ENST00000558735 MLLT1Q03111 559 aaPredicted RBP15□□□□□ -0.01
CASC4-205ENST00000558735 CCDC184Q52MB2 194 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms