RNA–Protein interactions for RNA: ENST00000558583.2

SHISA9-203, Transcript of shisa family member 9, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SHISA9, Length 6,724 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-203ENST00000558583 GBP3Q9H0R5 595 aa18.12■□□□□ 0.49
SHISA9-203ENST00000558583 GCOM1H8Y6P7 765 aaPredicted RBP18.12■□□□□ 0.49
SHISA9-203ENST00000558583 ZNF213O14771 459 aa18.12■□□□□ 0.49
SHISA9-203ENST00000558583 MYZAPP0CAP1 466 aa18.12■□□□□ 0.49
SHISA9-203ENST00000558583 MTIF2P46199 727 aaKnown RBP18.12■□□□□ 0.49
SHISA9-203ENST00000558583 CCDC160A6NGH7 325 aa18.12■□□□□ 0.49
SHISA9-203ENST00000558583 GJB2P29033 226 aa18.12■□□□□ 0.49
SHISA9-203ENST00000558583 CEP135Q66GS9 1140 aa18.12■□□□□ 0.49
SHISA9-203ENST00000558583 GIMAP6Q6P9H5 292 aa18.12■□□□□ 0.49
SHISA9-203ENST00000558583 HAND2P61296 217 aa18.11■□□□□ 0.49
SHISA9-203ENST00000558583 SYNCQ9H7C4 482 aa18.11■□□□□ 0.49
SHISA9-203ENST00000558583 MSH6P52701 1360 aa18.11■□□□□ 0.49
SHISA9-203ENST00000558583 MNAT1P51948 309 aa18.11■□□□□ 0.49
SHISA9-203ENST00000558583 SNW1Q13573 536 aaKnown RBP18.11■□□□□ 0.49
SHISA9-203ENST00000558583 TAF7Q15545 349 aaPredicted RBP18.11■□□□□ 0.49
SHISA9-203ENST00000558583 CATIPQ7Z7H3 387 aa18.11■□□□□ 0.49
SHISA9-203ENST00000558583 GPR162Q16538 588 aa18.11■□□□□ 0.49
SHISA9-203ENST00000558583 NESP48681 1621 aa18.11■□□□□ 0.49
SHISA9-203ENST00000558583 MX1P20591 662 aa18.1■□□□□ 0.49
SHISA9-203ENST00000558583 HOOK3Q86VS8 718 aa18.1■□□□□ 0.49
SHISA9-203ENST00000558583 UTP14AQ9BVJ6 771 aaKnown RBP18.1■□□□□ 0.49
SHISA9-203ENST00000558583 BAG3O95817 575 aa18.1■□□□□ 0.49
SHISA9-203ENST00000558583 MAP3K2Q9Y2U5 619 aa18.1■□□□□ 0.49
SHISA9-203ENST00000558583 PAFAH1B1P43034 410 aa18.1■□□□□ 0.49
SHISA9-203ENST00000558583 CALCOCO1Q9P1Z2 691 aa18.1■□□□□ 0.49
SHISA9-203ENST00000558583 CCDC12Q8WUD4 166 aaPredicted RBP18.1■□□□□ 0.49
SHISA9-203ENST00000558583 SLC52A1Q9NWF4 448 aa18.1■□□□□ 0.49
SHISA9-203ENST00000558583 CCDC194A0A1B0GVG4 234 aa18.1■□□□□ 0.49
SHISA9-203ENST00000558583 CSPG5O95196 566 aa18.1■□□□□ 0.49
SHISA9-203ENST00000558583 SNAPC4Q5SXM2 1469 aa18.1■□□□□ 0.49
SHISA9-203ENST00000558583 TBC1D2Q9BYX2 928 aa18.09■□□□□ 0.49
SHISA9-203ENST00000558583 RSPH14Q9UHP6 348 aa18.09■□□□□ 0.49
SHISA9-203ENST00000558583 LMTK3Q96Q04 1460 aa18.09■□□□□ 0.49
SHISA9-203ENST00000558583 RAB11FIP3O75154 756 aa18.09■□□□□ 0.49
SHISA9-203ENST00000558583 GOLGA8AA7E2F4 631 aa18.09■□□□□ 0.49
SHISA9-203ENST00000558583 GOLGA8BA8MQT2 603 aa18.09■□□□□ 0.49
SHISA9-203ENST00000558583 LDHAL6AQ6ZMR3 332 aa18.09■□□□□ 0.49
SHISA9-203ENST00000558583 SMIM23A6NLE4 172 aa18.09■□□□□ 0.49
SHISA9-203ENST00000558583 ANKRD24Q8TF21 1146 aa18.08■□□□□ 0.49
SHISA9-203ENST00000558583 TSPY3P0CV98 308 aa18.08■□□□□ 0.49
SHISA9-203ENST00000558583 TSPY8P0CW00 308 aa18.08■□□□□ 0.49
SHISA9-203ENST00000558583 SPOUT1Q5T280 376 aaKnown RBP18.08■□□□□ 0.49
SHISA9-203ENST00000558583 NOD1Q9Y239 953 aa18.08■□□□□ 0.48
SHISA9-203ENST00000558583 GRIN2BQ13224 1484 aa18.08■□□□□ 0.48
SHISA9-203ENST00000558583 PTGS1P23219 599 aa18.08■□□□□ 0.48
SHISA9-203ENST00000558583 TMEM110-MUSTN1A8MSY1 372 aa18.08■□□□□ 0.48
SHISA9-203ENST00000558583 DNAJC21Q5F1R6 531 aaKnown RBP18.08■□□□□ 0.48
SHISA9-203ENST00000558583 GOLIM4O00461 696 aa18.07■□□□□ 0.48
SHISA9-203ENST00000558583 YEATS4O95619 227 aa18.07■□□□□ 0.48
SHISA9-203ENST00000558583 KRT32Q14532 448 aa18.07■□□□□ 0.48
SHISA9-203ENST00000558583 TMCO4Q5TGY1 634 aa18.07■□□□□ 0.48
SHISA9-203ENST00000558583 USO1O60763 962 aaKnown RBP18.07■□□□□ 0.48
SHISA9-203ENST00000558583 GTF2A1P52655 376 aaPredicted RBP18.07■□□□□ 0.48
SHISA9-203ENST00000558583 CALM1P0DP23 149 aa18.07■□□□□ 0.48
SHISA9-203ENST00000558583 CALM2P0DP24 149 aa18.07■□□□□ 0.48
SHISA9-203ENST00000558583 CALM3P0DP25 149 aa18.07■□□□□ 0.48
SHISA9-203ENST00000558583 GJC1P36383 396 aa18.07■□□□□ 0.48
SHISA9-203ENST00000558583 U3KPZ7 1027 aaPredicted RBP18.07■□□□□ 0.48
SHISA9-203ENST00000558583 MICALCLQ6ZW33 695 aa18.07■□□□□ 0.48
SHISA9-203ENST00000558583 PHACTR2O75167 634 aa18.06■□□□□ 0.48
SHISA9-203ENST00000558583 GNG11P61952 73 aa18.06■□□□□ 0.48
SHISA9-203ENST00000558583 MCM6Q14566 821 aa18.06■□□□□ 0.48
SHISA9-203ENST00000558583 IDEP14735 1019 aa18.06■□□□□ 0.48
SHISA9-203ENST00000558583 C9orf84Q5VXU9 1444 aa18.06■□□□□ 0.48
SHISA9-203ENST00000558583 MXRA7P84157 204 aa18.06■□□□□ 0.48
SHISA9-203ENST00000558583 LRRC2Q9BYS8 371 aa18.06■□□□□ 0.48
SHISA9-203ENST00000558583 STX8Q9UNK0 236 aa18.06■□□□□ 0.48
SHISA9-203ENST00000558583 CCDC40Q4G0X9 1142 aa18.06■□□□□ 0.48
SHISA9-203ENST00000558583 EPRSP07814 1512 aaKnown RBP18.06■□□□□ 0.48
SHISA9-203ENST00000558583 A0A1W2PRG0 241 aa18.05■□□□□ 0.48
SHISA9-203ENST00000558583 AFMP43652 599 aa18.05■□□□□ 0.48
SHISA9-203ENST00000558583 DDB1Q16531 1140 aa18.05■□□□□ 0.48
SHISA9-203ENST00000558583 PKD2L1Q9P0L9 805 aa18.05■□□□□ 0.48
SHISA9-203ENST00000558583 NIP7Q9Y221 180 aaKnown RBP eCLIP18.05■□□□□ 0.48
SHISA9-203ENST00000558583 NECAB1Q8N987 351 aa18.05■□□□□ 0.48
SHISA9-203ENST00000558583 CWC25Q9NXE8 425 aaPredicted RBP18.05■□□□□ 0.48
SHISA9-203ENST00000558583 NSD3Q9BZ95 1437 aa18.05■□□□□ 0.48
SHISA9-203ENST00000558583 AMOTQ4VCS5 1084 aa18.05■□□□□ 0.48
SHISA9-203ENST00000558583 FGD6Q6ZV73 1430 aa18.05■□□□□ 0.48
SHISA9-203ENST00000558583 FAM160A1Q05DH4 1040 aa18.05■□□□□ 0.48
SHISA9-203ENST00000558583 CCDC152Q4G0S7 254 aa18.05■□□□□ 0.48
SHISA9-203ENST00000558583 HCLS1P14317 486 aaPredicted RBP18.04■□□□□ 0.48
SHISA9-203ENST00000558583 PDE4BQ07343 736 aa18.04■□□□□ 0.48
SHISA9-203ENST00000558583 RAB34Q9BZG1 259 aa18.04■□□□□ 0.48
SHISA9-203ENST00000558583 NCOA2Q15596 1464 aa18.04■□□□□ 0.48
SHISA9-203ENST00000558583 ZSCAN23Q3MJ62 389 aa18.04■□□□□ 0.48
SHISA9-203ENST00000558583 DNAAF4Q8WXU2 420 aa18.04■□□□□ 0.48
SHISA9-203ENST00000558583 DDX23Q9BUQ8 820 aaKnown RBP18.04■□□□□ 0.48
SHISA9-203ENST00000558583 PPP1R14CQ8TAE6 165 aa18.04■□□□□ 0.48
SHISA9-203ENST00000558583 CAPZA3Q96KX2 299 aa18.04■□□□□ 0.48
SHISA9-203ENST00000558583 CCDC61Q9Y6R9 512 aa18.04■□□□□ 0.48
SHISA9-203ENST00000558583 WDR63Q8IWG1 891 aa18.04■□□□□ 0.48
SHISA9-203ENST00000558583 SIRT1Q96EB6 747 aa18.04■□□□□ 0.48
SHISA9-203ENST00000558583 NCKAP5LQ9HCH0 1330 aa18.03■□□□□ 0.48
SHISA9-203ENST00000558583 HSF2BPO75031 334 aa18.03■□□□□ 0.48
SHISA9-203ENST00000558583 ARID5AQ03989 594 aa18.03■□□□□ 0.48
SHISA9-203ENST00000558583 STK32BQ9NY57 414 aa18.03■□□□□ 0.48
SHISA9-203ENST00000558583 CD109Q6YHK3 1445 aa18.03■□□□□ 0.48
SHISA9-203ENST00000558583 VPS36Q86VN1 386 aa18.03■□□□□ 0.48
SHISA9-203ENST00000558583 CALML4Q96GE6 196 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms