RNA–Protein interactions for RNA: ENST00000558560.1

RMDN3-206, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 5

Gene RMDN3, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-206ENST00000558560 LRP10Q7Z4F1 713 aa24.4■■□□□ 1.5
RMDN3-206ENST00000558560 ZBTB3Q9H5J0 574 aa24.4■■□□□ 1.5
RMDN3-206ENST00000558560 JDP2Q8WYK2 163 aa24.39■■□□□ 1.49
RMDN3-206ENST00000558560 RBM17Q96I25 401 aaKnown RBP24.39■■□□□ 1.49
RMDN3-206ENST00000558560 HACL1Q9UJ83 578 aa24.39■■□□□ 1.49
RMDN3-206ENST00000558560 NTSR2O95665 410 aa24.38■■□□□ 1.49
RMDN3-206ENST00000558560 PDIA6Q15084 440 aa24.38■■□□□ 1.49
RMDN3-206ENST00000558560 SLC10A5Q5PT55 438 aa24.38■■□□□ 1.49
RMDN3-206ENST00000558560 PNMA8AQ86V59 439 aaPredicted RBP24.38■■□□□ 1.49
RMDN3-206ENST00000558560 GPC2Q8N158 579 aa24.38■■□□□ 1.49
RMDN3-206ENST00000558560 ANKRD36CQ5JPF3 1778 aa24.37■■□□□ 1.49
RMDN3-206ENST00000558560 GPTP24298 496 aa24.37■■□□□ 1.49
RMDN3-206ENST00000558560 OLFM4Q6UX06 510 aa24.37■■□□□ 1.49
RMDN3-206ENST00000558560 VPS33BQ9H267 617 aa24.37■■□□□ 1.49
RMDN3-206ENST00000558560 ADAMTSL1Q8N6G6 1762 aa24.37■■□□□ 1.49
RMDN3-206ENST00000558560 PASKQ96RG2 1323 aa24.36■■□□□ 1.49
RMDN3-206ENST00000558560 ZNF541Q9H0D2 1346 aa24.36■■□□□ 1.49
RMDN3-206ENST00000558560 HSP90AB3PQ58FF7 597 aa24.36■■□□□ 1.49
RMDN3-206ENST00000558560 NLRP3Q96P20 1036 aa24.36■■□□□ 1.49
RMDN3-206ENST00000558560 MYBBP1AQ9BQG0 1328 aaKnown RBP24.35■■□□□ 1.49
RMDN3-206ENST00000558560 POTEIP0CG38 1075 aa24.35■■□□□ 1.49
RMDN3-206ENST00000558560 POTEJP0CG39 1038 aa24.35■■□□□ 1.49
RMDN3-206ENST00000558560 EPHX2P34913 555 aa24.34■■□□□ 1.49
RMDN3-206ENST00000558560 UTP14AQ9BVJ6 771 aaKnown RBP24.34■■□□□ 1.49
RMDN3-206ENST00000558560 ITGBL1O95965 494 aaPredicted RBP24.33■■□□□ 1.49
RMDN3-206ENST00000558560 EIF2S2P20042 333 aaKnown RBP24.33■■□□□ 1.49
RMDN3-206ENST00000558560 EIF6P56537 245 aaKnown RBP24.33■■□□□ 1.49
RMDN3-206ENST00000558560 TMX4Q9H1E5 349 aaPredicted RBP24.33■■□□□ 1.49
RMDN3-206ENST00000558560 CHL1O00533 1208 aa24.32■■□□□ 1.48
RMDN3-206ENST00000558560 COL13A1Q5TAT6 717 aaPredicted RBP24.32■■□□□ 1.48
RMDN3-206ENST00000558560 PPEF1O14829 653 aaPredicted RBP24.31■■□□□ 1.48
RMDN3-206ENST00000558560 HSPA1AP0DMV8 641 aaKnown RBP24.31■■□□□ 1.48
RMDN3-206ENST00000558560 HSPA1BP0DMV9 641 aaKnown RBP24.31■■□□□ 1.48
RMDN3-206ENST00000558560 DDX21Q9NR30 783 aaKnown RBP eCLIP24.31■■□□□ 1.48
RMDN3-206ENST00000558560 TMEM88BA6NKF7 163 aa24.3■■□□□ 1.48
RMDN3-206ENST00000558560 HOXB7P09629 217 aa24.3■■□□□ 1.48
RMDN3-206ENST00000558560 RUNDC1Q96C34 613 aa24.3■■□□□ 1.48
RMDN3-206ENST00000558560 CNTNAP1P78357 1384 aa24.29■■□□□ 1.48
RMDN3-206ENST00000558560 BBOX1O75936 387 aa24.29■■□□□ 1.48
RMDN3-206ENST00000558560 EAPPQ56P03 285 aaPredicted RBP24.29■■□□□ 1.48
RMDN3-206ENST00000558560 LARGE2Q8N3Y3 721 aa24.29■■□□□ 1.48
RMDN3-206ENST00000558560 ATP6V0A2Q9Y487 856 aa24.29■■□□□ 1.48
RMDN3-206ENST00000558560 LAMB2P55268 1798 aa24.29■■□□□ 1.48
RMDN3-206ENST00000558560 PROSER3Q2NL68 480 aa24.28■■□□□ 1.48
RMDN3-206ENST00000558560 COPS6Q7L5N1 327 aa24.28■■□□□ 1.48
RMDN3-206ENST00000558560 SUPT20HQ8NEM7 779 aa24.28■■□□□ 1.48
RMDN3-206ENST00000558560 CLEC11AQ9Y240 323 aa24.28■■□□□ 1.48
RMDN3-206ENST00000558560 LMOD1P29536 600 aaPredicted RBP24.27■■□□□ 1.48
RMDN3-206ENST00000558560 TCIRG1Q13488 830 aa24.27■■□□□ 1.48
RMDN3-206ENST00000558560 NLRP10Q86W26 655 aa24.27■■□□□ 1.48
RMDN3-206ENST00000558560 RTFDC1Q9BY42 306 aaPredicted RBP24.27■■□□□ 1.48
RMDN3-206ENST00000558560 DDX10Q13206 875 aaKnown RBP24.26■■□□□ 1.47
RMDN3-206ENST00000558560 WDR43Q15061 677 aaKnown RBP eCLIP24.26■■□□□ 1.47
RMDN3-206ENST00000558560 C3orf67Q6ZVT6 689 aa24.26■■□□□ 1.47
RMDN3-206ENST00000558560 CNTROBQ8N137 903 aa24.26■■□□□ 1.47
RMDN3-206ENST00000558560 MKRN1Q9UHC7 482 aaKnown RBP24.26■■□□□ 1.47
RMDN3-206ENST00000558560 COL4A5P29400 1685 aa24.26■■□□□ 1.47
RMDN3-206ENST00000558560 TMC4Q7Z404 712 aa24.25■■□□□ 1.47
RMDN3-206ENST00000558560 SP8Q8IXZ3 490 aa24.25■■□□□ 1.47
RMDN3-206ENST00000558560 NIM1KQ8IY84 436 aa24.25■■□□□ 1.47
RMDN3-206ENST00000558560 XAGE3Q8WTP9 111 aa24.25■■□□□ 1.47
RMDN3-206ENST00000558560 TRIM35Q9UPQ4 493 aa24.25■■□□□ 1.47
RMDN3-206ENST00000558560 TNS4Q8IZW8 715 aa24.24■■□□□ 1.47
RMDN3-206ENST00000558560 ABCC4O15439 1325 aa24.24■■□□□ 1.47
RMDN3-206ENST00000558560 SH3TC1Q8TE82 1336 aa24.24■■□□□ 1.47
RMDN3-206ENST00000558560 ANXA1P04083 346 aa24.23■■□□□ 1.47
RMDN3-206ENST00000558560 USP50Q70EL3 339 aaPredicted RBP24.23■■□□□ 1.47
RMDN3-206ENST00000558560 GJA3Q9Y6H8 435 aa24.23■■□□□ 1.47
RMDN3-206ENST00000558560 PPIP5K2O43314 1243 aa24.22■■□□□ 1.47
RMDN3-206ENST00000558560 AIMP1Q12904 312 aaKnown RBP24.22■■□□□ 1.47
RMDN3-206ENST00000558560 NEUROD2Q15784 382 aa24.22■■□□□ 1.47
RMDN3-206ENST00000558560 PLBD2Q8NHP8 589 aa24.22■■□□□ 1.47
RMDN3-206ENST00000558560 DBF4Q9UBU7 674 aaPredicted RBP24.22■■□□□ 1.47
RMDN3-206ENST00000558560 TRMT112Q9UI30 125 aaKnown RBP24.22■■□□□ 1.47
RMDN3-206ENST00000558560 TRPM7Q96QT4 1865 aa24.21■■□□□ 1.47
RMDN3-206ENST00000558560 LTBP1Q14766 1721 aa24.21■■□□□ 1.47
RMDN3-206ENST00000558560 SCNN1DP51172 638 aa24.21■■□□□ 1.47
RMDN3-206ENST00000558560 DDX46Q7L014 1031 aaKnown RBP24.21■■□□□ 1.47
RMDN3-206ENST00000558560 CCDC146Q8IYE0 955 aa24.21■■□□□ 1.47
RMDN3-206ENST00000558560 CFAP44Q96MT7 982 aa24.21■■□□□ 1.47
RMDN3-206ENST00000558560 RASSF10A6NK89 507 aa24.2■■□□□ 1.46
RMDN3-206ENST00000558560 HYPKQ9NX55 129 aa24.2■■□□□ 1.46
RMDN3-206ENST00000558560 ZNRF3Q9ULT6 936 aa24.2■■□□□ 1.46
RMDN3-206ENST00000558560 ADAMTS8Q9UP79 889 aa24.2■■□□□ 1.46
RMDN3-206ENST00000558560 CDHR2Q9BYE9 1310 aa24.19■■□□□ 1.46
RMDN3-206ENST00000558560 TCERG1O14776 1098 aaKnown RBP24.19■■□□□ 1.46
RMDN3-206ENST00000558560 GRAPQ13588 217 aa24.19■■□□□ 1.46
RMDN3-206ENST00000558560 HDGFL1Q5TGJ6 251 aa24.19■■□□□ 1.46
RMDN3-206ENST00000558560 MAP1SQ66K74 1059 aaPredicted RBP24.19■■□□□ 1.46
RMDN3-206ENST00000558560 DPP8Q6V1X1 898 aaPredicted RBP24.19■■□□□ 1.46
RMDN3-206ENST00000558560 ANKRD13DQ6ZTN6 518 aa24.19■■□□□ 1.46
RMDN3-206ENST00000558560 MPNDQ8N594 471 aa24.19■■□□□ 1.46
RMDN3-206ENST00000558560 GRAPLQ8TC17 118 aaPredicted RBP24.19■■□□□ 1.46
RMDN3-206ENST00000558560 NECTIN2Q92692 538 aa24.19■■□□□ 1.46
RMDN3-206ENST00000558560 CHPF2Q9P2E5 772 aa24.19■■□□□ 1.46
RMDN3-206ENST00000558560 VEGFBP49765 207 aa24.18■■□□□ 1.46
RMDN3-206ENST00000558560 TRIM28Q13263 835 aaKnown RBP24.18■■□□□ 1.46
RMDN3-206ENST00000558560 AOC3Q16853 763 aa24.18■■□□□ 1.46
RMDN3-206ENST00000558560 LRRC37AA6NMS7 1700 aa24.18■■□□□ 1.46
RMDN3-206ENST00000558560 HCLS1P14317 486 aaPredicted RBP24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms