RNA–Protein interactions for RNA: ENST00000558411.1

PCAT29-201, prostate cancer associated transcript 29, humanhuman

TSL 2 BASIC

Gene PCAT29, Length 2,121 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCAT29-201ENST00000558411 STX1AQ16623 288 aa13.18□□□□□ -0.3
PCAT29-201ENST00000558411 SLC4A10Q6U841 1118 aa13.18□□□□□ -0.3
PCAT29-201ENST00000558411 PI4K2BQ8TCG2 481 aa13.18□□□□□ -0.3
PCAT29-201ENST00000558411 PRAM1Q96QH2 718 aa13.18□□□□□ -0.3
PCAT29-201ENST00000558411 CDK19Q9BWU1 502 aa13.18□□□□□ -0.3
PCAT29-201ENST00000558411 SRRTQ9BXP5 876 aaKnown RBP13.18□□□□□ -0.3
PCAT29-201ENST00000558411 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
PCAT29-201ENST00000558411 ARID5BQ14865 1188 aa13.17□□□□□ -0.3
PCAT29-201ENST00000558411 ME3Q16798 604 aa13.17□□□□□ -0.3
PCAT29-201ENST00000558411 ARHGAP29Q52LW3 1261 aa13.17□□□□□ -0.3
PCAT29-201ENST00000558411 CDC37L1Q7L3B6 337 aa13.17□□□□□ -0.3
PCAT29-201ENST00000558411 RUFY2Q8WXA3 655 aa13.17□□□□□ -0.3
PCAT29-201ENST00000558411 LARP6Q9BRS8 491 aaKnown RBP13.17□□□□□ -0.3
PCAT29-201ENST00000558411 GEMIN8Q9NWZ8 242 aaKnown RBP13.17□□□□□ -0.3
PCAT29-201ENST00000558411 TRMT1Q9NXH9 659 aaKnown RBP13.17□□□□□ -0.3
PCAT29-201ENST00000558411 SOS1Q07889 1333 aaPredicted RBP13.17□□□□□ -0.3
PCAT29-201ENST00000558411 NR1I2O75469 434 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 NOP2P46087 812 aaKnown RBP13.16□□□□□ -0.3
PCAT29-201ENST00000558411 MAPK8IP2Q13387 824 aaPredicted RBP13.16□□□□□ -0.3
PCAT29-201ENST00000558411 TEX2Q8IWB9 1127 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 TRERF1Q96PN7 1200 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 PSD3Q9NYI0 1048 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 ORC3Q9UBD5 711 aaPredicted RBP13.16□□□□□ -0.3
PCAT29-201ENST00000558411 RSPH14Q9UHP6 348 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 PXDNLA1KZ92 1463 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 DLC1Q96QB1 1528 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 CCP110O43303 1012 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 CACNA1FO60840 1977 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 TRHP20396 242 aaPredicted RBP13.16□□□□□ -0.3
PCAT29-201ENST00000558411 CRB1P82279 1406 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 KRBA2Q6ZNG9 492 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 PHLPP2Q6ZVD8 1323 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.16□□□□□ -0.3
PCAT29-201ENST00000558411 CCDC150Q8NCX0 1101 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 RGS22Q8NE09 1264 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 JAKMIP1Q96N16 626 aaKnown RBP13.16□□□□□ -0.3
PCAT29-201ENST00000558411 STK26Q9P289 416 aa13.16□□□□□ -0.3
PCAT29-201ENST00000558411 F6X3S4 739 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 CHRM1P11229 460 aaPredicted RBP13.15□□□□□ -0.3
PCAT29-201ENST00000558411 FBLN1P23142 703 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 CASQ1P31415 396 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 SYT10Q6XYQ8 523 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 IQUBQ8NA54 791 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 NEK11Q8NG66 645 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 BICD2Q8TD16 824 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 PPP1R13BQ96KQ4 1090 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 CHMP4AQ9BY43 222 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 LRRFIP2Q9Y608 721 aaKnown RBP13.15□□□□□ -0.3
PCAT29-201ENST00000558411 POGZQ7Z3K3 1410 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 USP42Q9H9J4 1324 aaKnown RBP13.15□□□□□ -0.3
PCAT29-201ENST00000558411 MYO1CO00159 1063 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 RAPGEF3O95398 923 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 ZSCAN26Q16670 478 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 E4F1Q66K89 784 aaPredicted RBP13.15□□□□□ -0.3
PCAT29-201ENST00000558411 G2E3Q7L622 706 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 NFATC2IPQ8NCF5 419 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 GOLGA5Q8TBA6 731 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 SSH3Q8TE77 659 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 UBXN4Q92575 508 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 ALDH8A1Q9H2A2 487 aaPredicted RBP13.15□□□□□ -0.3
PCAT29-201ENST00000558411 USP16Q9Y5T5 823 aa13.15□□□□□ -0.3
PCAT29-201ENST00000558411 FAM208AQ9UK61 1670 aaKnown RBP13.14□□□□□ -0.31
PCAT29-201ENST00000558411 MAP3K5Q99683 1374 aa13.14□□□□□ -0.31
PCAT29-201ENST00000558411 BECN2A8MW95 431 aa13.14□□□□□ -0.31
PCAT29-201ENST00000558411 CPA1P15085 419 aa13.14□□□□□ -0.31
PCAT29-201ENST00000558411 ANKRD1Q15327 319 aa13.14□□□□□ -0.31
PCAT29-201ENST00000558411 CCDC158Q5M9N0 1113 aa13.14□□□□□ -0.31
PCAT29-201ENST00000558411 PGBD1Q96JS3 809 aa13.14□□□□□ -0.31
PCAT29-201ENST00000558411 AK7Q96M32 723 aa13.14□□□□□ -0.31
PCAT29-201ENST00000558411 NPHP1O15259 732 aa13.13□□□□□ -0.31
PCAT29-201ENST00000558411 NRDCO43847 1150 aa13.13□□□□□ -0.31
PCAT29-201ENST00000558411 C11orf57Q6ZUT1 292 aaPredicted RBP13.13□□□□□ -0.31
PCAT29-201ENST00000558411 FERMT3Q86UX7 667 aa13.13□□□□□ -0.31
PCAT29-201ENST00000558411 FBXO18Q8NFZ0 1043 aa13.13□□□□□ -0.31
PCAT29-201ENST00000558411 SMARCE1Q969G3 411 aa13.13□□□□□ -0.31
PCAT29-201ENST00000558411 EXOC4Q96A65 974 aa13.13□□□□□ -0.31
PCAT29-201ENST00000558411 ANO10Q9NW15 660 aa13.13□□□□□ -0.31
PCAT29-201ENST00000558411 EFCAB8A8MWE9 144 aa13.13□□□□□ -0.31
PCAT29-201ENST00000558411 DHX16O60231 1041 aaKnown RBP13.13□□□□□ -0.31
PCAT29-201ENST00000558411 ZKSCAN1P17029 563 aaPredicted RBP13.13□□□□□ -0.31
PCAT29-201ENST00000558411 ADCK5Q3MIX3 580 aa13.13□□□□□ -0.31
PCAT29-201ENST00000558411 DHX40Q8IX18 779 aaKnown RBP13.13□□□□□ -0.31
PCAT29-201ENST00000558411 BRMS1Q9HCU9 246 aa13.13□□□□□ -0.31
PCAT29-201ENST00000558411 ATG3Q9NT62 314 aa13.13□□□□□ -0.31
PCAT29-201ENST00000558411 TPCN1Q9ULQ1 816 aa13.13□□□□□ -0.31
PCAT29-201ENST00000558411 NEO1Q92859 1461 aa13.13□□□□□ -0.31
PCAT29-201ENST00000558411 TTC41PQ6P2S7 1318 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 POLR3GO15318 223 aaPredicted RBP13.12□□□□□ -0.31
PCAT29-201ENST00000558411 PSMA5P28066 241 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 NECTIN1Q15223 517 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 NUTM2DQ5VT03 806 aaPredicted RBP13.12□□□□□ -0.31
PCAT29-201ENST00000558411 FAM173BQ6P4H8 233 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 CWC27Q6UX04 472 aaKnown RBP13.12□□□□□ -0.31
PCAT29-201ENST00000558411 NUTM1Q86Y26 1132 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 GOLGA6L1Q8N7Z2 621 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 CCDC191Q8NCU4 936 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 CFAP45Q9UL16 551 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 SPG7Q9UQ90 795 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 MYH15Q9Y2K3 1946 aa13.12□□□□□ -0.31
PCAT29-201ENST00000558411 RICTORQ6R327 1708 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms