RNA–Protein interactions for RNA: ENST00000558220.1

SHC4-205, Transcript of SHC adaptor protein 4, humanhuman

TSL 3

Gene SHC4, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4-205ENST00000558220 EIF4A2Q14240 407 aaKnown RBP11.38□□□□□ -0.59
SHC4-205ENST00000558220 AMOTQ4VCS5 1084 aa11.38□□□□□ -0.59
SHC4-205ENST00000558220 PLEKHO1Q53GL0 409 aaPredicted RBP11.38□□□□□ -0.59
SHC4-205ENST00000558220 TTC13Q8NBP0 860 aa11.38□□□□□ -0.59
SHC4-205ENST00000558220 ZNF831Q5JPB2 1677 aa11.37□□□□□ -0.59
SHC4-205ENST00000558220 TNNT2P45379 298 aaPredicted RBP11.37□□□□□ -0.59
SHC4-205ENST00000558220 DCAF5Q96JK2 942 aa11.37□□□□□ -0.59
SHC4-205ENST00000558220 PANK3Q9H999 370 aa11.37□□□□□ -0.59
SHC4-205ENST00000558220 IGSF1Q8N6C5 1336 aa11.36□□□□□ -0.59
SHC4-205ENST00000558220 SENP3-EIF4A1A0A087X0R7 540 aa11.36□□□□□ -0.59
SHC4-205ENST00000558220 YBX3P16989 372 aaKnown RBP eCLIP11.36□□□□□ -0.59
SHC4-205ENST00000558220 ATG3Q9NT62 314 aa11.36□□□□□ -0.59
SHC4-205ENST00000558220 ASAP1Q9ULH1 1129 aa11.36□□□□□ -0.59
SHC4-205ENST00000558220 GNPATO15228 680 aa11.35□□□□□ -0.59
SHC4-205ENST00000558220 TRAPPC3LQ5T215 181 aa11.35□□□□□ -0.59
SHC4-205ENST00000558220 SWT1Q5T5J6 900 aaKnown RBP11.35□□□□□ -0.59
SHC4-205ENST00000558220 MORC1Q86VD1 984 aa11.35□□□□□ -0.59
SHC4-205ENST00000558220 LINC00116Q8NCU8 138 aa11.35□□□□□ -0.59
SHC4-205ENST00000558220 NPDC1Q9NQX5 325 aaPredicted RBP11.35□□□□□ -0.59
SHC4-205ENST00000558220 RTCBQ9Y3I0 505 aaKnown RBP11.35□□□□□ -0.59
SHC4-205ENST00000558220 HSPA5P11021 654 aaKnown RBP11.34□□□□□ -0.59
SHC4-205ENST00000558220 COPS2P61201 443 aa11.34□□□□□ -0.59
SHC4-205ENST00000558220 C1orf141Q5JVX7 400 aa11.34□□□□□ -0.59
SHC4-205ENST00000558220 RC3H1Q5TC82 1133 aaKnown RBP11.34□□□□□ -0.59
SHC4-205ENST00000558220 PADI6Q6TGC4 694 aa11.34□□□□□ -0.59
SHC4-205ENST00000558220 NLGN1Q8N2Q7 840 aa11.34□□□□□ -0.59
SHC4-205ENST00000558220 KNSTRNQ9Y448 316 aa11.34□□□□□ -0.59
SHC4-205ENST00000558220 CABP4P57796 275 aa11.33□□□□□ -0.6
SHC4-205ENST00000558220 ITPK1Q13572 414 aa11.33□□□□□ -0.6
SHC4-205ENST00000558220 MTHFSP49914 203 aa11.32□□□□□ -0.6
SHC4-205ENST00000558220 TGFB2P61812 414 aa11.32□□□□□ -0.6
SHC4-205ENST00000558220 ZNF530Q6P9A1 599 aaPredicted RBP11.32□□□□□ -0.6
SHC4-205ENST00000558220 AMIGO3Q86WK7 504 aa11.32□□□□□ -0.6
SHC4-205ENST00000558220 SLF2Q8IX21 1173 aa11.32□□□□□ -0.6
SHC4-205ENST00000558220 CCER1Q8TC90 406 aaPredicted RBP11.32□□□□□ -0.6
SHC4-205ENST00000558220 NECTIN2Q92692 538 aa11.32□□□□□ -0.6
SHC4-205ENST00000558220 GPBP1L1Q9HC44 474 aaPredicted RBP11.32□□□□□ -0.6
SHC4-205ENST00000558220 KIF13BQ9NQT8 1826 aa11.32□□□□□ -0.6
SHC4-205ENST00000558220 CNTNAP4Q9C0A0 1308 aa11.32□□□□□ -0.6
SHC4-205ENST00000558220 COL5A3P25940 1745 aaPredicted RBP11.32□□□□□ -0.6
SHC4-205ENST00000558220 KDRP35968 1356 aa11.31□□□□□ -0.6
SHC4-205ENST00000558220 RFC4P35249 363 aa11.31□□□□□ -0.6
SHC4-205ENST00000558220 PDZRN3Q9UPQ7 1066 aa11.31□□□□□ -0.6
SHC4-205ENST00000558220 ATP10DQ9P241 1426 aa11.3□□□□□ -0.6
SHC4-205ENST00000558220 RPS6KA4O75676 772 aa11.3□□□□□ -0.6
SHC4-205ENST00000558220 MMP10P09238 476 aa11.3□□□□□ -0.6
SHC4-205ENST00000558220 CCDC87Q9NVE4 849 aa11.3□□□□□ -0.6
SHC4-205ENST00000558220 SCN11AQ9UI33 1791 aa11.3□□□□□ -0.6
SHC4-205ENST00000558220 MYH14Q7Z406 1995 aaKnown RBP11.29□□□□□ -0.6
SHC4-205ENST00000558220 GGCXP38435 758 aa11.29□□□□□ -0.6
SHC4-205ENST00000558220 SULT6B1Q6IMI4 303 aa11.29□□□□□ -0.6
SHC4-205ENST00000558220 ARHGEF1Q92888 912 aaKnown RBP11.29□□□□□ -0.6
SHC4-205ENST00000558220 PARP3Q9Y6F1 533 aa11.29□□□□□ -0.6
SHC4-205ENST00000558220 KDM6AO15550 1401 aaPredicted RBP11.28□□□□□ -0.6
SHC4-205ENST00000558220 SMIM5Q71RC9 77 aa11.28□□□□□ -0.6
SHC4-205ENST00000558220 NFATC2IPQ8NCF5 419 aa11.28□□□□□ -0.6
SHC4-205ENST00000558220 SLC4A9Q96Q91 983 aa11.28□□□□□ -0.6
SHC4-205ENST00000558220 VIRMAQ69YN4 1812 aaKnown RBP11.28□□□□□ -0.6
SHC4-205ENST00000558220 ADCY9O60503 1353 aa11.28□□□□□ -0.6
SHC4-205ENST00000558220 C4AP0C0L4 1744 aa11.27□□□□□ -0.61
SHC4-205ENST00000558220 N4BP2Q86UW6 1770 aaPredicted RBP11.27□□□□□ -0.61
SHC4-205ENST00000558220 IL13P35225 146 aa11.27□□□□□ -0.61
SHC4-205ENST00000558220 AKAP4Q5JQC9 854 aa11.27□□□□□ -0.61
SHC4-205ENST00000558220 CICQ96RK0 1608 aaPredicted RBP11.27□□□□□ -0.61
SHC4-205ENST00000558220 PTCD1O75127 700 aaKnown RBP11.26□□□□□ -0.61
SHC4-205ENST00000558220 ZPR1O75312 459 aa11.26□□□□□ -0.61
SHC4-205ENST00000558220 GYS1P13807 737 aa11.26□□□□□ -0.61
SHC4-205ENST00000558220 AEBP1Q8IUX7 1158 aa11.26□□□□□ -0.61
SHC4-205ENST00000558220 KCNV2Q8TDN2 545 aa11.26□□□□□ -0.61
SHC4-205ENST00000558220 TMUB1Q9BVT8 246 aa11.26□□□□□ -0.61
SHC4-205ENST00000558220 BRCA1P38398 1863 aaKnown RBP11.25□□□□□ -0.61
SHC4-205ENST00000558220 BCS1LQ9Y276 419 aa11.25□□□□□ -0.61
SHC4-205ENST00000558220 ARFGEF1Q9Y6D6 1849 aa11.25□□□□□ -0.61
SHC4-205ENST00000558220 C10orf71Q711Q0 1435 aa11.25□□□□□ -0.61
SHC4-205ENST00000558220 PXDNLA1KZ92 1463 aa11.25□□□□□ -0.61
SHC4-205ENST00000558220 KIAA1551Q9HCM1 1747 aa11.24□□□□□ -0.61
SHC4-205ENST00000558220 CRKLP46109 303 aaKnown RBP11.24□□□□□ -0.61
SHC4-205ENST00000558220 PLCB2Q00722 1185 aa11.24□□□□□ -0.61
SHC4-205ENST00000558220 SLC52A2Q9HAB3 445 aa11.24□□□□□ -0.61
SHC4-205ENST00000558220 WWC3Q9ULE0 1092 aa11.24□□□□□ -0.61
SHC4-205ENST00000558220 CEP350Q5VT06 3117 aa11.24□□□□□ -0.61
SHC4-205ENST00000558220 A0A0G2JLW4 131 aa11.23□□□□□ -0.61
SHC4-205ENST00000558220 DIAPH1O60610 1272 aaKnown RBP11.23□□□□□ -0.61
SHC4-205ENST00000558220 FCHSD2O94868 740 aa11.23□□□□□ -0.61
SHC4-205ENST00000558220 SLC4A3P48751 1232 aa11.23□□□□□ -0.61
SHC4-205ENST00000558220 ZNF787Q6DD87 383 aa11.23□□□□□ -0.61
SHC4-205ENST00000558220 ZNF526Q8TF50 670 aaPredicted RBP11.23□□□□□ -0.61
SHC4-205ENST00000558220 PIM2Q9P1W9 311 aa11.23□□□□□ -0.61
SHC4-205ENST00000558220 USP42Q9H9J4 1324 aaKnown RBP11.23□□□□□ -0.61
SHC4-205ENST00000558220 TJP1Q07157 1748 aa11.23□□□□□ -0.61
SHC4-205ENST00000558220 DPEP1P16444 411 aa11.22□□□□□ -0.61
SHC4-205ENST00000558220 HSPA6P17066 643 aa11.22□□□□□ -0.61
SHC4-205ENST00000558220 KIF7Q2M1P5 1343 aa11.22□□□□□ -0.61
SHC4-205ENST00000558220 ARHGAP27Q6ZUM4 889 aa11.22□□□□□ -0.61
SHC4-205ENST00000558220 VSIG10Q8N0Z9 540 aa11.22□□□□□ -0.61
SHC4-205ENST00000558220 PCDHB3Q9Y5E6 796 aa11.22□□□□□ -0.61
SHC4-205ENST00000558220 RNMTO43148 476 aaKnown RBP11.21□□□□□ -0.61
SHC4-205ENST00000558220 PRR14Q9BWN1 585 aa11.21□□□□□ -0.61
SHC4-205ENST00000558220 MRC1P22897 1456 aa11.2□□□□□ -0.62
SHC4-205ENST00000558220 PER1O15534 1290 aaPredicted RBP11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms