RNA–Protein interactions for RNA: ENST00000558131.1

RPL28-205, Transcript of ribosomal protein L28, humanhuman

TSL 5 BASIC

Gene RPL28, Length 444 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-205ENST00000558131 DDX10Q13206 875 aaKnown RBP21.52■■□□□ 1.04
RPL28-205ENST00000558131 TAF1P21675 1872 aa21.52■■□□□ 1.03
RPL28-205ENST00000558131 ALDH1B1P30837 517 aa21.51■■□□□ 1.03
RPL28-205ENST00000558131 CCDC146Q8IYE0 955 aa21.51■■□□□ 1.03
RPL28-205ENST00000558131 RTKN2Q8IZC4 609 aa21.51■■□□□ 1.03
RPL28-205ENST00000558131 TRIM35Q9UPQ4 493 aa21.51■■□□□ 1.03
RPL28-205ENST00000558131 LRRC37AA6NMS7 1700 aa21.51■■□□□ 1.03
RPL28-205ENST00000558131 GTF2E1P29083 439 aaPredicted RBP21.5■■□□□ 1.03
RPL28-205ENST00000558131 KRT24Q2M2I5 525 aa21.5■■□□□ 1.03
RPL28-205ENST00000558131 PSMD1Q99460 953 aa21.5■■□□□ 1.03
RPL28-205ENST00000558131 FZD9O00144 591 aa21.49■■□□□ 1.03
RPL28-205ENST00000558131 IARSP41252 1262 aaKnown RBP21.49■■□□□ 1.03
RPL28-205ENST00000558131 COL4A1P02462 1669 aa21.48■■□□□ 1.03
RPL28-205ENST00000558131 EIF2S2P20042 333 aaKnown RBP21.48■■□□□ 1.03
RPL28-205ENST00000558131 CHADLQ6NUI6 762 aa21.48■■□□□ 1.03
RPL28-205ENST00000558131 SYNE4Q8N205 404 aa21.48■■□□□ 1.03
RPL28-205ENST00000558131 TAF1DQ9H5J8 278 aaPredicted RBP21.48■■□□□ 1.03
RPL28-205ENST00000558131 CHL1O00533 1208 aa21.47■■□□□ 1.03
RPL28-205ENST00000558131 LMOD3Q0VAK6 560 aa21.47■■□□□ 1.03
RPL28-205ENST00000558131 DUOX1Q9NRD9 1551 aa21.47■■□□□ 1.03
RPL28-205ENST00000558131 PASKQ96RG2 1323 aa21.47■■□□□ 1.03
RPL28-205ENST00000558131 IQCA1LA6NCM1 817 aa21.45■■□□□ 1.02
RPL28-205ENST00000558131 PARP10Q53GL7 1025 aa21.45■■□□□ 1.02
RPL28-205ENST00000558131 RPGRQ92834 1020 aaKnown RBP21.45■■□□□ 1.02
RPL28-205ENST00000558131 RUNDC1Q96C34 613 aa21.45■■□□□ 1.02
RPL28-205ENST00000558131 CRAMP1Q96RY5 1269 aa21.45■■□□□ 1.02
RPL28-205ENST00000558131 NEUROD2Q15784 382 aa21.44■■□□□ 1.02
RPL28-205ENST00000558131 SLC10A5Q5PT55 438 aa21.44■■□□□ 1.02
RPL28-205ENST00000558131 LDHDQ86WU2 507 aa21.44■■□□□ 1.02
RPL28-205ENST00000558131 NECTIN2Q92692 538 aa21.44■■□□□ 1.02
RPL28-205ENST00000558131 ADAMTS8Q9UP79 889 aa21.44■■□□□ 1.02
RPL28-205ENST00000558131 RNF123Q5XPI4 1314 aa21.44■■□□□ 1.02
RPL28-205ENST00000558131 PPEF1O14829 653 aaPredicted RBP21.43■■□□□ 1.02
RPL28-205ENST00000558131 CC2D2BQ6DHV5 1058 aa21.43■■□□□ 1.02
RPL28-205ENST00000558131 COPS6Q7L5N1 327 aa21.43■■□□□ 1.02
RPL28-205ENST00000558131 PPP1R42Q7Z4L9 355 aa21.43■■□□□ 1.02
RPL28-205ENST00000558131 XAGE3Q8WTP9 111 aa21.43■■□□□ 1.02
RPL28-205ENST00000558131 ABCC4O15439 1325 aa21.42■■□□□ 1.02
RPL28-205ENST00000558131 DDX21Q9NR30 783 aaKnown RBP eCLIP21.42■■□□□ 1.02
RPL28-205ENST00000558131 CREBZFQ9NS37 354 aa21.42■■□□□ 1.02
RPL28-205ENST00000558131 ITGBL1O95965 494 aaPredicted RBP21.41■■□□□ 1.02
RPL28-205ENST00000558131 NLRP10Q86W26 655 aa21.41■■□□□ 1.02
RPL28-205ENST00000558131 GPC2Q8N158 579 aa21.41■■□□□ 1.02
RPL28-205ENST00000558131 RBM17Q96I25 401 aaKnown RBP21.41■■□□□ 1.02
RPL28-205ENST00000558131 UTP14AQ9BVJ6 771 aaKnown RBP21.41■■□□□ 1.02
RPL28-205ENST00000558131 PRKRIP1Q9H875 184 aaPredicted RBP21.41■■□□□ 1.02
RPL28-205ENST00000558131 COL13A1Q5TAT6 717 aaPredicted RBP21.4■■□□□ 1.02
RPL28-205ENST00000558131 CHPF2Q9P2E5 772 aa21.4■■□□□ 1.02
RPL28-205ENST00000558131 HACL1Q9UJ83 578 aa21.4■■□□□ 1.02
RPL28-205ENST00000558131 EPHX2P34913 555 aa21.39■■□□□ 1.01
RPL28-205ENST00000558131 AIMP1Q12904 312 aaKnown RBP21.39■■□□□ 1.01
RPL28-205ENST00000558131 THSD7BQ9C0I4 1608 aa21.39■■□□□ 1.01
RPL28-205ENST00000558131 TCIRG1Q13488 830 aa21.38■■□□□ 1.01
RPL28-205ENST00000558131 WDR43Q15061 677 aaKnown RBP eCLIP21.38■■□□□ 1.01
RPL28-205ENST00000558131 NLRP3Q96P20 1036 aa21.38■■□□□ 1.01
RPL28-205ENST00000558131 ATP6V0A2Q9Y487 856 aa21.38■■□□□ 1.01
RPL28-205ENST00000558131 CNTNAP1P78357 1384 aa21.37■■□□□ 1.01
RPL28-205ENST00000558131 TCERG1O14776 1098 aaKnown RBP21.37■■□□□ 1.01
RPL28-205ENST00000558131 HOXB7P09629 217 aa21.37■■□□□ 1.01
RPL28-205ENST00000558131 HSPA1AP0DMV8 641 aaKnown RBP21.37■■□□□ 1.01
RPL28-205ENST00000558131 HSPA1BP0DMV9 641 aaKnown RBP21.37■■□□□ 1.01
RPL28-205ENST00000558131 SCNN1DP51172 638 aa21.37■■□□□ 1.01
RPL28-205ENST00000558131 GRIPAP1Q4V328 841 aa21.37■■□□□ 1.01
RPL28-205ENST00000558131 HSP90AB3PQ58FF7 597 aa21.37■■□□□ 1.01
RPL28-205ENST00000558131 TRPM7Q96QT4 1865 aa21.37■■□□□ 1.01
RPL28-205ENST00000558131 ZNF853P0CG23 659 aa21.36■■□□□ 1.01
RPL28-205ENST00000558131 HCLS1P14317 486 aaPredicted RBP21.36■■□□□ 1.01
RPL28-205ENST00000558131 EAPPQ56P03 285 aaPredicted RBP21.36■■□□□ 1.01
RPL28-205ENST00000558131 JDP2Q8WYK2 163 aa21.36■■□□□ 1.01
RPL28-205ENST00000558131 CFAP44Q96MT7 982 aa21.36■■□□□ 1.01
RPL28-205ENST00000558131 LAS1LQ9Y4W2 734 aaKnown RBP21.36■■□□□ 1.01
RPL28-205ENST00000558131 HDGFL1Q5TGJ6 251 aa21.35■■□□□ 1.01
RPL28-205ENST00000558131 RTFDC1Q9BY42 306 aaPredicted RBP21.35■■□□□ 1.01
RPL28-205ENST00000558131 MBIPQ9NS73 344 aa21.35■■□□□ 1.01
RPL28-205ENST00000558131 MKRN1Q9UHC7 482 aaKnown RBP21.35■■□□□ 1.01
RPL28-205ENST00000558131 LARGE2Q8N3Y3 721 aa21.34■■□□□ 1.01
RPL28-205ENST00000558131 ISCA1Q9BUE6 129 aa21.34■■□□□ 1.01
RPL28-205ENST00000558131 SH3TC1Q8TE82 1336 aa21.33■■□□□ 1.01
RPL28-205ENST00000558131 AOC3Q16853 763 aa21.33■■□□□ 1.01
RPL28-205ENST00000558131 MAP1SQ66K74 1059 aaPredicted RBP21.33■■□□□ 1.01
RPL28-205ENST00000558131 PNMA8AQ86V59 439 aaPredicted RBP21.33■■□□□ 1.01
RPL28-205ENST00000558131 PLBD2Q8NHP8 589 aa21.33■■□□□ 1.01
RPL28-205ENST00000558131 ZNF428Q96B54 188 aa21.33■■□□□ 1.01
RPL28-205ENST00000558131 TRMT112Q9UI30 125 aaKnown RBP21.33■■□□□ 1.01
RPL28-205ENST00000558131 PPIP5K2O43314 1243 aa21.32■■□□□ 1
RPL28-205ENST00000558131 EIF6P56537 245 aaKnown RBP21.32■■□□□ 1
RPL28-205ENST00000558131 GJA3Q9Y6H8 435 aa21.32■■□□□ 1
RPL28-205ENST00000558131 EPS15P42566 896 aa21.31■■□□□ 1
RPL28-205ENST00000558131 DUSP27Q5VZP5 1158 aa21.31■■□□□ 1
RPL28-205ENST00000558131 SP8Q8IXZ3 490 aa21.31■■□□□ 1
RPL28-205ENST00000558131 DBF4Q9UBU7 674 aaPredicted RBP21.31■■□□□ 1
RPL28-205ENST00000558131 TMEM88BA6NKF7 163 aa21.3■■□□□ 1
RPL28-205ENST00000558131 GRAPQ13588 217 aa21.3■■□□□ 1
RPL28-205ENST00000558131 GRAPLQ8TC17 118 aaPredicted RBP21.3■■□□□ 1
RPL28-205ENST00000558131 VPS33BQ9H267 617 aa21.3■■□□□ 1
RPL28-205ENST00000558131 APAF1O14727 1248 aa21.29■■□□□ 1
RPL28-205ENST00000558131 BBOX1O75936 387 aa21.29■■□□□ 1
RPL28-205ENST00000558131 ANKRD13DQ6ZTN6 518 aa21.29■■□□□ 1
RPL28-205ENST00000558131 NIM1KQ8IY84 436 aa21.29■■□□□ 1
RPL28-205ENST00000558131 CNTROBQ8N137 903 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 99.6 ms