RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 CAMTA1Q9Y6Y1 1673 aa9.42□□□□□ -0.9
SPG11-204ENST00000557866 IPO8O15397 1037 aaKnown RBP9.41□□□□□ -0.9
SPG11-204ENST00000557866 RNMTO43148 476 aaKnown RBP9.41□□□□□ -0.9
SPG11-204ENST00000557866 CSB-PGBD3P0DP91 1061 aa9.41□□□□□ -0.9
SPG11-204ENST00000557866 MPRIPQ6WCQ1 1025 aa9.41□□□□□ -0.9
SPG11-204ENST00000557866 TMEM57Q8N5G2 664 aa9.41□□□□□ -0.9
SPG11-204ENST00000557866 PRDM11Q9NQV5 511 aa9.41□□□□□ -0.9
SPG11-204ENST00000557866 BABAM1Q9NWV8 329 aa9.41□□□□□ -0.9
SPG11-204ENST00000557866 PCDHB15Q9Y5E8 787 aa9.41□□□□□ -0.9
SPG11-204ENST00000557866 LRRC37A3O60309 1634 aa9.41□□□□□ -0.9
SPG11-204ENST00000557866 NHSL1Q5SYE7 1610 aa9.41□□□□□ -0.9
SPG11-204ENST00000557866 MEGF6O75095 1541 aa9.41□□□□□ -0.9
SPG11-204ENST00000557866 RGPD2P0DJD1 1756 aa9.4□□□□□ -0.9
SPG11-204ENST00000557866 KCNQ3O43525 872 aa9.4□□□□□ -0.9
SPG11-204ENST00000557866 NR1I2O75469 434 aa9.4□□□□□ -0.9
SPG11-204ENST00000557866 IGHDP01880 384 aa9.4□□□□□ -0.9
SPG11-204ENST00000557866 MS4A1P11836 297 aa9.4□□□□□ -0.9
SPG11-204ENST00000557866 TATP17735 454 aaPredicted RBP9.4□□□□□ -0.9
SPG11-204ENST00000557866 SKAP1Q86WV1 359 aa9.4□□□□□ -0.9
SPG11-204ENST00000557866 SULF1Q8IWU6 871 aa9.4□□□□□ -0.9
SPG11-204ENST00000557866 FTSJ3Q8IY81 847 aaKnown RBP9.4□□□□□ -0.9
SPG11-204ENST00000557866 ARHGAP45Q92619 1136 aa9.4□□□□□ -0.9
SPG11-204ENST00000557866 WDR17Q8IZU2 1322 aa9.39□□□□□ -0.91
SPG11-204ENST00000557866 DDX11L8A8MPP1 907 aa9.39□□□□□ -0.91
SPG11-204ENST00000557866 MAP2K5Q13163 448 aa9.39□□□□□ -0.91
SPG11-204ENST00000557866 C1orf141Q5JVX7 400 aa9.39□□□□□ -0.91
SPG11-204ENST00000557866 RDH13Q8NBN7 331 aa9.39□□□□□ -0.91
SPG11-204ENST00000557866 RAPGEF4Q8WZA2 1011 aa9.39□□□□□ -0.91
SPG11-204ENST00000557866 PHOX2BQ99453 314 aa9.39□□□□□ -0.91
SPG11-204ENST00000557866 PRKD2Q9BZL6 878 aa9.39□□□□□ -0.91
SPG11-204ENST00000557866 V9GY48 417 aaPredicted RBP9.39□□□□□ -0.91
SPG11-204ENST00000557866 COL5A2P05997 1499 aaPredicted RBP9.39□□□□□ -0.91
SPG11-204ENST00000557866 FAM208AQ9UK61 1670 aaKnown RBP9.39□□□□□ -0.91
SPG11-204ENST00000557866 AHDC1Q5TGY3 1603 aaPredicted RBP9.38□□□□□ -0.91
SPG11-204ENST00000557866 ABCC4O15439 1325 aa9.38□□□□□ -0.91
SPG11-204ENST00000557866 PHKG2P15735 406 aa9.38□□□□□ -0.91
SPG11-204ENST00000557866 EIF4A1P60842 406 aaKnown RBP9.38□□□□□ -0.91
SPG11-204ENST00000557866 AAMPQ13685 434 aa9.38□□□□□ -0.91
SPG11-204ENST00000557866 LARP1Q6PKG0 1096 aaKnown RBP9.38□□□□□ -0.91
SPG11-204ENST00000557866 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.38□□□□□ -0.91
SPG11-204ENST00000557866 CENPQQ7L2Z9 268 aaPredicted RBP9.38□□□□□ -0.91
SPG11-204ENST00000557866 CYP27B1O15528 508 aa9.37□□□□□ -0.91
SPG11-204ENST00000557866 G2E3Q7L622 706 aa9.37□□□□□ -0.91
SPG11-204ENST00000557866 ITPRIPQ8IWB1 547 aa9.37□□□□□ -0.91
SPG11-204ENST00000557866 SCUBE3Q8IX30 993 aa9.37□□□□□ -0.91
SPG11-204ENST00000557866 CARD10Q9BWT7 1032 aa9.37□□□□□ -0.91
SPG11-204ENST00000557866 ZBTB40Q9NUA8 1239 aa9.37□□□□□ -0.91
SPG11-204ENST00000557866 SPG7Q9UQ90 795 aa9.37□□□□□ -0.91
SPG11-204ENST00000557866 OVOS2A0A0G2JMS6 1433 aa9.37□□□□□ -0.91
SPG11-204ENST00000557866 RGS12O14924 1447 aa9.37□□□□□ -0.91
SPG11-204ENST00000557866 KDM6AO15550 1401 aaPredicted RBP9.37□□□□□ -0.91
SPG11-204ENST00000557866 RGPD5Q99666 1765 aa9.37□□□□□ -0.91
SPG11-204ENST00000557866 PLEKHG2Q9H7P9 1386 aa9.37□□□□□ -0.91
SPG11-204ENST00000557866 ROBO1Q9Y6N7 1651 aa9.36□□□□□ -0.91
SPG11-204ENST00000557866 BTBD11A6QL63 1104 aa9.36□□□□□ -0.91
SPG11-204ENST00000557866 IRF6O14896 467 aa9.36□□□□□ -0.91
SPG11-204ENST00000557866 ZBTB7BO15156 539 aaPredicted RBP9.36□□□□□ -0.91
SPG11-204ENST00000557866 TOM1L2Q6ZVM7 507 aa9.36□□□□□ -0.91
SPG11-204ENST00000557866 NLRP7Q8WX94 980 aa9.36□□□□□ -0.91
SPG11-204ENST00000557866 API5Q9BZZ5 524 aaKnown RBP9.36□□□□□ -0.91
SPG11-204ENST00000557866 DDX19BQ9UMR2 479 aa9.36□□□□□ -0.91
SPG11-204ENST00000557866 SOS1Q07889 1333 aaPredicted RBP9.35□□□□□ -0.91
SPG11-204ENST00000557866 TEFQ10587 303 aa9.35□□□□□ -0.91
SPG11-204ENST00000557866 IFNL2Q8IZJ0 200 aa9.35□□□□□ -0.91
SPG11-204ENST00000557866 STRN4Q9NRL3 753 aa9.35□□□□□ -0.91
SPG11-204ENST00000557866 PTPRCP08575 1304 aa9.34□□□□□ -0.91
SPG11-204ENST00000557866 ABCA3Q99758 1704 aa9.34□□□□□ -0.91
SPG11-204ENST00000557866 TOM1O60784 492 aa9.34□□□□□ -0.91
SPG11-204ENST00000557866 GCGRP47871 477 aa9.34□□□□□ -0.91
SPG11-204ENST00000557866 EVA1CP58658 441 aa9.34□□□□□ -0.91
SPG11-204ENST00000557866 PIP4K2BP78356 416 aa9.34□□□□□ -0.91
SPG11-204ENST00000557866 LAPTM4AQ15012 233 aa9.34□□□□□ -0.91
SPG11-204ENST00000557866 CCDC30Q5VVM6 783 aa9.34□□□□□ -0.91
SPG11-204ENST00000557866 INTS3Q68E01 1043 aaKnown RBP9.34□□□□□ -0.91
SPG11-204ENST00000557866 SLC52A2Q9HAB3 445 aa9.34□□□□□ -0.91
SPG11-204ENST00000557866 BTG4Q9NY30 223 aa9.34□□□□□ -0.91
SPG11-204ENST00000557866 HEG1Q9ULI3 1381 aa9.34□□□□□ -0.91
SPG11-204ENST00000557866 TLL1O43897 1013 aa9.33□□□□□ -0.92
SPG11-204ENST00000557866 ADH1BP00325 375 aa9.33□□□□□ -0.92
SPG11-204ENST00000557866 HOXB7P09629 217 aa9.33□□□□□ -0.92
SPG11-204ENST00000557866 IL2RBP14784 551 aa9.33□□□□□ -0.92
SPG11-204ENST00000557866 ATP6V1AP38606 617 aa9.33□□□□□ -0.92
SPG11-204ENST00000557866 PUS10Q3MIT2 529 aaKnown RBP9.33□□□□□ -0.92
SPG11-204ENST00000557866 ZCRB1Q8TBF4 217 aaKnown RBP9.33□□□□□ -0.92
SPG11-204ENST00000557866 DCAF5Q96JK2 942 aa9.33□□□□□ -0.92
SPG11-204ENST00000557866 ADAMTS7Q9UKP4 1686 aa9.32□□□□□ -0.92
SPG11-204ENST00000557866 PRAMEF22A3QJZ6 481 aa9.32□□□□□ -0.92
SPG11-204ENST00000557866 RNF223E7ERA6 249 aa9.32□□□□□ -0.92
SPG11-204ENST00000557866 F6X3S4 739 aa9.32□□□□□ -0.92
SPG11-204ENST00000557866 GIGYF1O75420 1035 aaPredicted RBP9.32□□□□□ -0.92
SPG11-204ENST00000557866 SLC39A6Q13433 755 aa9.32□□□□□ -0.92
SPG11-204ENST00000557866 HDAC1Q13547 482 aaPredicted RBP9.32□□□□□ -0.92
SPG11-204ENST00000557866 HDGFL1Q5TGJ6 251 aa9.32□□□□□ -0.92
SPG11-204ENST00000557866 NFATC2IPQ8NCF5 419 aa9.32□□□□□ -0.92
SPG11-204ENST00000557866 RWDD1Q9H446 243 aaPredicted RBP9.32□□□□□ -0.92
SPG11-204ENST00000557866 RBM19Q9Y4C8 960 aaKnown RBP9.32□□□□□ -0.92
SPG11-204ENST00000557866 COL16A1Q07092 1604 aaPredicted RBP9.31□□□□□ -0.92
SPG11-204ENST00000557866 COL22A1Q8NFW1 1626 aaPredicted RBP9.31□□□□□ -0.92
SPG11-204ENST00000557866 UBAP1LF5GYI3 381 aa9.31□□□□□ -0.92
SPG11-204ENST00000557866 HSP90AB1P08238 724 aaKnown RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms