RNA–Protein interactions for RNA: ENST00000557662.1

RIPK3-207, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 2

Gene RIPK3, Length 569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-207ENST00000557662 ZNF277Q9NRM2 450 aaPredicted RBP30.15■■■□□ 2.42
RIPK3-207ENST00000557662 PSMD1Q99460 953 aa30.14■■■□□ 2.42
RIPK3-207ENST00000557662 ANXA1P04083 346 aa30.13■■■□□ 2.41
RIPK3-207ENST00000557662 EIF2S2P20042 333 aaKnown RBP30.13■■■□□ 2.41
RIPK3-207ENST00000557662 PARP10Q53GL7 1025 aa30.13■■■□□ 2.41
RIPK3-207ENST00000557662 ZNF541Q9H0D2 1346 aa30.13■■■□□ 2.41
RIPK3-207ENST00000557662 POTEIP0CG38 1075 aa30.12■■■□□ 2.41
RIPK3-207ENST00000557662 POTEJP0CG39 1038 aa30.12■■■□□ 2.41
RIPK3-207ENST00000557662 C3orf67Q6ZVT6 689 aa30.12■■■□□ 2.41
RIPK3-207ENST00000557662 DDX60Q8IY21 1712 aaKnown RBP30.12■■■□□ 2.41
RIPK3-207ENST00000557662 FZD9O00144 591 aa30.11■■■□□ 2.41
RIPK3-207ENST00000557662 IARSP41252 1262 aaKnown RBP30.11■■■□□ 2.41
RIPK3-207ENST00000557662 KRT24Q2M2I5 525 aa30.11■■■□□ 2.41
RIPK3-207ENST00000557662 SLC10A5Q5PT55 438 aa30.11■■■□□ 2.41
RIPK3-207ENST00000557662 CC2D2BQ6DHV5 1058 aa30.11■■■□□ 2.41
RIPK3-207ENST00000557662 CRAMP1Q96RY5 1269 aa30.11■■■□□ 2.41
RIPK3-207ENST00000557662 PRKRIP1Q9H875 184 aaPredicted RBP30.11■■■□□ 2.41
RIPK3-207ENST00000557662 ADAMTS8Q9UP79 889 aa30.11■■■□□ 2.41
RIPK3-207ENST00000557662 TAF1P21675 1872 aa30.1■■■□□ 2.41
RIPK3-207ENST00000557662 SYNE4Q8N205 404 aa30.1■■■□□ 2.41
RIPK3-207ENST00000557662 LTBP1Q14766 1721 aa30.09■■■□□ 2.41
RIPK3-207ENST00000557662 RNF123Q5XPI4 1314 aa30.09■■■□□ 2.41
RIPK3-207ENST00000557662 PPP1R42Q7Z4L9 355 aa30.09■■■□□ 2.41
RIPK3-207ENST00000557662 CHADLQ6NUI6 762 aa30.08■■■□□ 2.41
RIPK3-207ENST00000557662 SLC51AQ86UW1 340 aa30.08■■■□□ 2.41
RIPK3-207ENST00000557662 DDX21Q9NR30 783 aaKnown RBP eCLIP30.08■■■□□ 2.41
RIPK3-207ENST00000557662 IQCA1LA6NCM1 817 aa30.07■■■□□ 2.4
RIPK3-207ENST00000557662 NEUROD2Q15784 382 aa30.07■■■□□ 2.4
RIPK3-207ENST00000557662 RPGRQ92834 1020 aaKnown RBP30.07■■■□□ 2.4
RIPK3-207ENST00000557662 TAF1DQ9H5J8 278 aaPredicted RBP30.07■■■□□ 2.4
RIPK3-207ENST00000557662 LRRC37AA6NMS7 1700 aa30.06■■■□□ 2.4
RIPK3-207ENST00000557662 WDR43Q15061 677 aaKnown RBP eCLIP30.06■■■□□ 2.4
RIPK3-207ENST00000557662 COPS6Q7L5N1 327 aa30.06■■■□□ 2.4
RIPK3-207ENST00000557662 HOXB7P09629 217 aa30.05■■■□□ 2.4
RIPK3-207ENST00000557662 GRIPAP1Q4V328 841 aa30.05■■■□□ 2.4
RIPK3-207ENST00000557662 XAGE3Q8WTP9 111 aa30.05■■■□□ 2.4
RIPK3-207ENST00000557662 NLRP10Q86W26 655 aa30.04■■■□□ 2.4
RIPK3-207ENST00000557662 RBM17Q96I25 401 aaKnown RBP30.04■■■□□ 2.4
RIPK3-207ENST00000557662 UTP14AQ9BVJ6 771 aaKnown RBP30.04■■■□□ 2.4
RIPK3-207ENST00000557662 PASKQ96RG2 1323 aa30.03■■■□□ 2.4
RIPK3-207ENST00000557662 NECTIN2Q92692 538 aa30.03■■■□□ 2.4
RIPK3-207ENST00000557662 HSP90AB3PQ58FF7 597 aa30.02■■■□□ 2.4
RIPK3-207ENST00000557662 LDHDQ86WU2 507 aa30.02■■■□□ 2.4
RIPK3-207ENST00000557662 PPEF1O14829 653 aaPredicted RBP30.01■■■□□ 2.39
RIPK3-207ENST00000557662 ZNF853P0CG23 659 aa30.01■■■□□ 2.39
RIPK3-207ENST00000557662 TCIRG1Q13488 830 aa30.01■■■□□ 2.39
RIPK3-207ENST00000557662 CFAP44Q96MT7 982 aa30.01■■■□□ 2.39
RIPK3-207ENST00000557662 NLRP3Q96P20 1036 aa30.01■■■□□ 2.39
RIPK3-207ENST00000557662 CHPF2Q9P2E5 772 aa30.01■■■□□ 2.39
RIPK3-207ENST00000557662 GPC2Q8N158 579 aa30■■■□□ 2.39
RIPK3-207ENST00000557662 ABCC4O15439 1325 aa29.99■■■□□ 2.39
RIPK3-207ENST00000557662 AIMP1Q12904 312 aaKnown RBP29.98■■■□□ 2.39
RIPK3-207ENST00000557662 CREBZFQ9NS37 354 aa29.98■■■□□ 2.39
RIPK3-207ENST00000557662 HACL1Q9UJ83 578 aa29.98■■■□□ 2.39
RIPK3-207ENST00000557662 ATP6V0A2Q9Y487 856 aa29.98■■■□□ 2.39
RIPK3-207ENST00000557662 DUOX1Q9NRD9 1551 aa29.98■■■□□ 2.39
RIPK3-207ENST00000557662 ITGBL1O95965 494 aaPredicted RBP29.97■■■□□ 2.39
RIPK3-207ENST00000557662 HDGFL1Q5TGJ6 251 aa29.97■■■□□ 2.39
RIPK3-207ENST00000557662 EPHX2P34913 555 aa29.96■■■□□ 2.39
RIPK3-207ENST00000557662 JDP2Q8WYK2 163 aa29.96■■■□□ 2.39
RIPK3-207ENST00000557662 MBIPQ9NS73 344 aa29.96■■■□□ 2.39
RIPK3-207ENST00000557662 LAS1LQ9Y4W2 734 aaKnown RBP29.96■■■□□ 2.39
RIPK3-207ENST00000557662 COL4A1P02462 1669 aa29.95■■■□□ 2.39
RIPK3-207ENST00000557662 PLBD2Q8NHP8 589 aa29.95■■■□□ 2.39
RIPK3-207ENST00000557662 ISCA1Q9BUE6 129 aa29.95■■■□□ 2.39
RIPK3-207ENST00000557662 RTFDC1Q9BY42 306 aaPredicted RBP29.95■■■□□ 2.39
RIPK3-207ENST00000557662 DBF4Q9UBU7 674 aaPredicted RBP29.94■■■□□ 2.38
RIPK3-207ENST00000557662 SH3TC1Q8TE82 1336 aa29.94■■■□□ 2.38
RIPK3-207ENST00000557662 HCLS1P14317 486 aaPredicted RBP29.93■■■□□ 2.38
RIPK3-207ENST00000557662 DUSP27Q5VZP5 1158 aa29.93■■■□□ 2.38
RIPK3-207ENST00000557662 VPS33BQ9H267 617 aa29.93■■■□□ 2.38
RIPK3-207ENST00000557662 TRPM7Q96QT4 1865 aa29.92■■■□□ 2.38
RIPK3-207ENST00000557662 TRMT112Q9UI30 125 aaKnown RBP29.92■■■□□ 2.38
RIPK3-207ENST00000557662 APAF1O14727 1248 aa29.91■■■□□ 2.38
RIPK3-207ENST00000557662 SCNN1DP51172 638 aa29.91■■■□□ 2.38
RIPK3-207ENST00000557662 ANKRD13DQ6ZTN6 518 aa29.91■■■□□ 2.38
RIPK3-207ENST00000557662 PNMA8AQ86V59 439 aaPredicted RBP29.91■■■□□ 2.38
RIPK3-207ENST00000557662 LARGE2Q8N3Y3 721 aa29.91■■■□□ 2.38
RIPK3-207ENST00000557662 IFT57Q9NWB7 429 aa29.91■■■□□ 2.38
RIPK3-207ENST00000557662 BBOX1O75936 387 aa29.9■■■□□ 2.38
RIPK3-207ENST00000557662 EIF6P56537 245 aaKnown RBP29.9■■■□□ 2.38
RIPK3-207ENST00000557662 SP8Q8IXZ3 490 aa29.9■■■□□ 2.38
RIPK3-207ENST00000557662 TCERG1O14776 1098 aaKnown RBP29.89■■■□□ 2.38
RIPK3-207ENST00000557662 HYPKQ9NX55 129 aa29.89■■■□□ 2.38
RIPK3-207ENST00000557662 CNTNAP1P78357 1384 aa29.89■■■□□ 2.37
RIPK3-207ENST00000557662 TRIM28Q13263 835 aaKnown RBP29.88■■■□□ 2.37
RIPK3-207ENST00000557662 EAPPQ56P03 285 aaPredicted RBP29.88■■■□□ 2.37
RIPK3-207ENST00000557662 GRAPQ13588 217 aa29.87■■■□□ 2.37
RIPK3-207ENST00000557662 AOC3Q16853 763 aa29.87■■■□□ 2.37
RIPK3-207ENST00000557662 GRAPLQ8TC17 118 aaPredicted RBP29.87■■■□□ 2.37
RIPK3-207ENST00000557662 PPIP5K2O43314 1243 aa29.86■■■□□ 2.37
RIPK3-207ENST00000557662 COL13A1Q5TAT6 717 aaPredicted RBP29.86■■■□□ 2.37
RIPK3-207ENST00000557662 HSPA1AP0DMV8 641 aaKnown RBP29.85■■■□□ 2.37
RIPK3-207ENST00000557662 HSPA1BP0DMV9 641 aaKnown RBP29.85■■■□□ 2.37
RIPK3-207ENST00000557662 NIM1KQ8IY84 436 aa29.85■■■□□ 2.37
RIPK3-207ENST00000557662 GNAI1P63096 354 aa29.84■■■□□ 2.37
RIPK3-207ENST00000557662 SF3B3Q15393 1217 aaKnown RBP29.84■■■□□ 2.37
RIPK3-207ENST00000557662 DDX46Q7L014 1031 aaKnown RBP29.84■■■□□ 2.37
RIPK3-207ENST00000557662 GJA3Q9Y6H8 435 aa29.84■■■□□ 2.37
RIPK3-207ENST00000557662 EPS15P42566 896 aa29.83■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms