RNA–Protein interactions for RNA: ENST00000557177.1

VRTN-202, Transcript of vertebrae development associated, humanhuman

TSL 4

Gene VRTN, Length 521 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRTN-202ENST00000557177 NTSR2O95665 410 aa19.01■□□□□ 0.63
VRTN-202ENST00000557177 CC2D2BQ6DHV5 1058 aa19.01■□□□□ 0.63
VRTN-202ENST00000557177 TSPYL4Q9UJ04 414 aa19.01■□□□□ 0.63
VRTN-202ENST00000557177 PDIA6Q15084 440 aa19■□□□□ 0.63
VRTN-202ENST00000557177 RPGRQ92834 1020 aaKnown RBP19■□□□□ 0.63
VRTN-202ENST00000557177 HACL1Q9UJ83 578 aa19■□□□□ 0.63
VRTN-202ENST00000557177 ITGBL1O95965 494 aaPredicted RBP18.99■□□□□ 0.63
VRTN-202ENST00000557177 GPC2Q8N158 579 aa18.99■□□□□ 0.63
VRTN-202ENST00000557177 BABAM1Q9NWV8 329 aa18.99■□□□□ 0.63
VRTN-202ENST00000557177 RNF123Q5XPI4 1314 aa18.99■□□□□ 0.63
VRTN-202ENST00000557177 ANKRD36CQ5JPF3 1778 aa18.98■□□□□ 0.63
VRTN-202ENST00000557177 CNTNAP1P78357 1384 aa18.98■□□□□ 0.63
VRTN-202ENST00000557177 EPHX2P34913 555 aa18.98■□□□□ 0.63
VRTN-202ENST00000557177 RIPK4P57078 832 aa18.98■□□□□ 0.63
VRTN-202ENST00000557177 RALBP1Q15311 655 aa18.98■□□□□ 0.63
VRTN-202ENST00000557177 C3orf67Q6ZVT6 689 aa18.98■□□□□ 0.63
VRTN-202ENST00000557177 CRAMP1Q96RY5 1269 aa18.98■□□□□ 0.63
VRTN-202ENST00000557177 MKRN1Q9UHC7 482 aaKnown RBP18.98■□□□□ 0.63
VRTN-202ENST00000557177 GRIPAP1Q4V328 841 aa18.97■□□□□ 0.63
VRTN-202ENST00000557177 PARP10Q53GL7 1025 aa18.97■□□□□ 0.63
VRTN-202ENST00000557177 EAPPQ56P03 285 aaPredicted RBP18.97■□□□□ 0.63
VRTN-202ENST00000557177 PPP1R42Q7Z4L9 355 aa18.97■□□□□ 0.63
VRTN-202ENST00000557177 SLC51AQ86UW1 340 aa18.97■□□□□ 0.63
VRTN-202ENST00000557177 JDP2Q8WYK2 163 aa18.97■□□□□ 0.63
VRTN-202ENST00000557177 LTBP1Q14766 1721 aa18.97■□□□□ 0.63
VRTN-202ENST00000557177 TMPOP42166 694 aaKnown RBP18.96■□□□□ 0.63
VRTN-202ENST00000557177 PROSER3Q2NL68 480 aa18.96■□□□□ 0.63
VRTN-202ENST00000557177 PNMA8AQ86V59 439 aaPredicted RBP18.96■□□□□ 0.63
VRTN-202ENST00000557177 TNS4Q8IZW8 715 aa18.96■□□□□ 0.63
VRTN-202ENST00000557177 RBM17Q96I25 401 aaKnown RBP18.96■□□□□ 0.63
VRTN-202ENST00000557177 LAMB2P55268 1798 aa18.96■□□□□ 0.63
VRTN-202ENST00000557177 PPEF1O14829 653 aaPredicted RBP18.95■□□□□ 0.62
VRTN-202ENST00000557177 EIF2S2P20042 333 aaKnown RBP18.95■□□□□ 0.62
VRTN-202ENST00000557177 TMEM88BA6NKF7 163 aa18.94■□□□□ 0.62
VRTN-202ENST00000557177 ANXA1P04083 346 aa18.94■□□□□ 0.62
VRTN-202ENST00000557177 LMOD3Q0VAK6 560 aa18.94■□□□□ 0.62
VRTN-202ENST00000557177 SLC10A5Q5PT55 438 aa18.94■□□□□ 0.62
VRTN-202ENST00000557177 EIF6P56537 245 aaKnown RBP18.93■□□□□ 0.62
VRTN-202ENST00000557177 NLRP3Q96P20 1036 aa18.93■□□□□ 0.62
VRTN-202ENST00000557177 UTP14AQ9BVJ6 771 aaKnown RBP18.93■□□□□ 0.62
VRTN-202ENST00000557177 CLEC11AQ9Y240 323 aa18.93■□□□□ 0.62
VRTN-202ENST00000557177 MAP1SQ66K74 1059 aaPredicted RBP18.92■□□□□ 0.62
VRTN-202ENST00000557177 LARGE2Q8N3Y3 721 aa18.92■□□□□ 0.62
VRTN-202ENST00000557177 SCNN1DP51172 638 aa18.91■□□□□ 0.62
VRTN-202ENST00000557177 CNTROBQ8N137 903 aa18.91■□□□□ 0.62
VRTN-202ENST00000557177 ATP6V0A2Q9Y487 856 aa18.91■□□□□ 0.62
VRTN-202ENST00000557177 GJA3Q9Y6H8 435 aa18.91■□□□□ 0.62
VRTN-202ENST00000557177 ABCC4O15439 1325 aa18.91■□□□□ 0.62
VRTN-202ENST00000557177 MYBBP1AQ9BQG0 1328 aaKnown RBP18.91■□□□□ 0.62
VRTN-202ENST00000557177 TCERG1O14776 1098 aaKnown RBP18.9■□□□□ 0.62
VRTN-202ENST00000557177 VEGFBP49765 207 aa18.9■□□□□ 0.62
VRTN-202ENST00000557177 HSP90AB3PQ58FF7 597 aa18.9■□□□□ 0.62
VRTN-202ENST00000557177 COPS6Q7L5N1 327 aa18.9■□□□□ 0.62
VRTN-202ENST00000557177 CHL1O00533 1208 aa18.89■□□□□ 0.61
VRTN-202ENST00000557177 NLRP10Q86W26 655 aa18.89■□□□□ 0.61
VRTN-202ENST00000557177 XAGE3Q8WTP9 111 aa18.89■□□□□ 0.61
VRTN-202ENST00000557177 VPS33BQ9H267 617 aa18.89■□□□□ 0.61
VRTN-202ENST00000557177 DDX21Q9NR30 783 aaKnown RBP eCLIP18.89■□□□□ 0.61
VRTN-202ENST00000557177 RASSF10A6NK89 507 aa18.88■□□□□ 0.61
VRTN-202ENST00000557177 LMOD1P29536 600 aaPredicted RBP18.88■□□□□ 0.61
VRTN-202ENST00000557177 EPS15P42566 896 aa18.88■□□□□ 0.61
VRTN-202ENST00000557177 KRT24Q2M2I5 525 aa18.88■□□□□ 0.61
VRTN-202ENST00000557177 NIM1KQ8IY84 436 aa18.88■□□□□ 0.61
VRTN-202ENST00000557177 CCDC146Q8IYE0 955 aa18.88■□□□□ 0.61
VRTN-202ENST00000557177 NECTIN2Q92692 538 aa18.88■□□□□ 0.61
VRTN-202ENST00000557177 RTFDC1Q9BY42 306 aaPredicted RBP18.88■□□□□ 0.61
VRTN-202ENST00000557177 TRIM35Q9UPQ4 493 aa18.88■□□□□ 0.61
VRTN-202ENST00000557177 FOXN1O15353 648 aa18.87■□□□□ 0.61
VRTN-202ENST00000557177 PPIP5K2O43314 1243 aa18.87■□□□□ 0.61
VRTN-202ENST00000557177 CAPN15O75808 1086 aa18.87■□□□□ 0.61
VRTN-202ENST00000557177 AIMP1Q12904 312 aaKnown RBP18.87■□□□□ 0.61
VRTN-202ENST00000557177 TCIRG1Q13488 830 aa18.87■□□□□ 0.61
VRTN-202ENST00000557177 AOC3Q16853 763 aa18.87■□□□□ 0.61
VRTN-202ENST00000557177 DDX60Q8IY21 1712 aaKnown RBP18.87■□□□□ 0.61
VRTN-202ENST00000557177 LRRC37AA6NMS7 1700 aa18.86■□□□□ 0.61
VRTN-202ENST00000557177 BBOX1O75936 387 aa18.86■□□□□ 0.61
VRTN-202ENST00000557177 HCLS1P14317 486 aaPredicted RBP18.86■□□□□ 0.61
VRTN-202ENST00000557177 NEUROD2Q15784 382 aa18.86■□□□□ 0.61
VRTN-202ENST00000557177 RUNDC1Q96C34 613 aa18.86■□□□□ 0.61
VRTN-202ENST00000557177 TMX4Q9H1E5 349 aaPredicted RBP18.86■□□□□ 0.61
VRTN-202ENST00000557177 TAF1P21675 1872 aa18.86■□□□□ 0.61
VRTN-202ENST00000557177 SH3TC1Q8TE82 1336 aa18.85■□□□□ 0.61
VRTN-202ENST00000557177 DDX10Q13206 875 aaKnown RBP18.85■□□□□ 0.61
VRTN-202ENST00000557177 USP50Q70EL3 339 aaPredicted RBP18.85■□□□□ 0.61
VRTN-202ENST00000557177 SP8Q8IXZ3 490 aa18.85■□□□□ 0.61
VRTN-202ENST00000557177 SUPT20HQ8NEM7 779 aa18.85■□□□□ 0.61
VRTN-202ENST00000557177 CHPF2Q9P2E5 772 aa18.85■□□□□ 0.61
VRTN-202ENST00000557177 TRMT112Q9UI30 125 aaKnown RBP18.85■□□□□ 0.61
VRTN-202ENST00000557177 THSD7BQ9C0I4 1608 aa18.85■□□□□ 0.61
VRTN-202ENST00000557177 DUOX1Q9NRD9 1551 aa18.85■□□□□ 0.61
VRTN-202ENST00000557177 TRPM7Q96QT4 1865 aa18.84■□□□□ 0.61
VRTN-202ENST00000557177 HOXB7P09629 217 aa18.84■□□□□ 0.61
VRTN-202ENST00000557177 DEFB115Q30KQ5 88 aa18.84■□□□□ 0.61
VRTN-202ENST00000557177 WBP1LQ9NX94 342 aa18.84■□□□□ 0.61
VRTN-202ENST00000557177 ZNRF3Q9ULT6 936 aa18.84■□□□□ 0.61
VRTN-202ENST00000557177 CXCL9Q07325 125 aa18.83■□□□□ 0.6
VRTN-202ENST00000557177 GRAPQ13588 217 aa18.83■□□□□ 0.6
VRTN-202ENST00000557177 DPP8Q6V1X1 898 aaPredicted RBP18.83■□□□□ 0.6
VRTN-202ENST00000557177 GRAPLQ8TC17 118 aaPredicted RBP18.83■□□□□ 0.6
VRTN-202ENST00000557177 PRDM10Q9NQV6 1147 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms