RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 CRY2Q49AN0 593 aa17.5■□□□□ 0.39
TGFB3-204ENST00000556285 CCDC146Q8IYE0 955 aa17.5■□□□□ 0.39
TGFB3-204ENST00000556285 RNF123Q5XPI4 1314 aa17.49■□□□□ 0.39
TGFB3-204ENST00000556285 EIF2S2P20042 333 aaKnown RBP17.49■□□□□ 0.39
TGFB3-204ENST00000556285 ZNF34Q8IZ26 560 aa17.49■□□□□ 0.39
TGFB3-204ENST00000556285 TNS4Q8IZW8 715 aa17.49■□□□□ 0.39
TGFB3-204ENST00000556285 CREBZFQ9NS37 354 aa17.49■□□□□ 0.39
TGFB3-204ENST00000556285 ITGBL1O95965 494 aaPredicted RBP17.48■□□□□ 0.39
TGFB3-204ENST00000556285 ALDH1B1P30837 517 aa17.48■□□□□ 0.39
TGFB3-204ENST00000556285 GIGYF2Q6Y7W6 1299 aaKnown RBP17.48■□□□□ 0.39
TGFB3-204ENST00000556285 SYNE4Q8N205 404 aa17.48■□□□□ 0.39
TGFB3-204ENST00000556285 NECTIN2Q92692 538 aa17.48■□□□□ 0.39
TGFB3-204ENST00000556285 NYXQ9GZU5 481 aa17.48■□□□□ 0.39
TGFB3-204ENST00000556285 FZD9O00144 591 aa17.47■□□□□ 0.39
TGFB3-204ENST00000556285 NTSR2O95665 410 aa17.47■□□□□ 0.39
TGFB3-204ENST00000556285 IARSP41252 1262 aaKnown RBP17.47■□□□□ 0.39
TGFB3-204ENST00000556285 NEUROD2Q15784 382 aa17.47■□□□□ 0.39
TGFB3-204ENST00000556285 KRT24Q2M2I5 525 aa17.47■□□□□ 0.39
TGFB3-204ENST00000556285 RTKN2Q8IZC4 609 aa17.47■□□□□ 0.39
TGFB3-204ENST00000556285 CNTNAP1P78357 1384 aa17.47■□□□□ 0.39
TGFB3-204ENST00000556285 RIC1Q4ADV7 1423 aa17.47■□□□□ 0.39
TGFB3-204ENST00000556285 ERBB4Q15303 1308 aa17.47■□□□□ 0.39
TGFB3-204ENST00000556285 TRPM7Q96QT4 1865 aa17.46■□□□□ 0.39
TGFB3-204ENST00000556285 FMR1Q06787 632 aaKnown RBP eCLIP17.46■□□□□ 0.39
TGFB3-204ENST00000556285 EAPPQ56P03 285 aaPredicted RBP17.46■□□□□ 0.39
TGFB3-204ENST00000556285 LDHDQ86WU2 507 aa17.46■□□□□ 0.39
TGFB3-204ENST00000556285 MYBBP1AQ9BQG0 1328 aaKnown RBP17.46■□□□□ 0.38
TGFB3-204ENST00000556285 COL4A1P02462 1669 aa17.45■□□□□ 0.38
TGFB3-204ENST00000556285 IBTKQ9P2D0 1353 aaPredicted RBP17.45■□□□□ 0.38
TGFB3-204ENST00000556285 RPGRQ92834 1020 aaKnown RBP17.45■□□□□ 0.38
TGFB3-204ENST00000556285 DDX60Q8IY21 1712 aaKnown RBP17.44■□□□□ 0.38
TGFB3-204ENST00000556285 TCERG1O14776 1098 aaKnown RBP17.44■□□□□ 0.38
TGFB3-204ENST00000556285 FOXN1O15353 648 aa17.44■□□□□ 0.38
TGFB3-204ENST00000556285 HOXA10P31260 410 aaPredicted RBP17.44■□□□□ 0.38
TGFB3-204ENST00000556285 EPHX2P34913 555 aa17.44■□□□□ 0.38
TGFB3-204ENST00000556285 MAP1SQ66K74 1059 aaPredicted RBP17.44■□□□□ 0.38
TGFB3-204ENST00000556285 TRIM35Q9UPQ4 493 aa17.44■□□□□ 0.38
TGFB3-204ENST00000556285 IQCA1LA6NCM1 817 aa17.43■□□□□ 0.38
TGFB3-204ENST00000556285 VEGFBP49765 207 aa17.43■□□□□ 0.38
TGFB3-204ENST00000556285 ZNF428Q96B54 188 aa17.43■□□□□ 0.38
TGFB3-204ENST00000556285 HACL1Q9UJ83 578 aa17.43■□□□□ 0.38
TGFB3-204ENST00000556285 CHL1O00533 1208 aa17.42■□□□□ 0.38
TGFB3-204ENST00000556285 LMOD3Q0VAK6 560 aa17.42■□□□□ 0.38
TGFB3-204ENST00000556285 AIMP1Q12904 312 aaKnown RBP17.42■□□□□ 0.38
TGFB3-204ENST00000556285 COPS6Q7L5N1 327 aa17.42■□□□□ 0.38
TGFB3-204ENST00000556285 XAGE3Q8WTP9 111 aa17.42■□□□□ 0.38
TGFB3-204ENST00000556285 CRAMP1Q96RY5 1269 aa17.42■□□□□ 0.38
TGFB3-204ENST00000556285 PSMD1Q99460 953 aa17.42■□□□□ 0.38
TGFB3-204ENST00000556285 BABAM1Q9NWV8 329 aa17.42■□□□□ 0.38
TGFB3-204ENST00000556285 ADAMTS8Q9UP79 889 aa17.42■□□□□ 0.38
TGFB3-204ENST00000556285 LAS1LQ9Y4W2 734 aaKnown RBP17.42■□□□□ 0.38
TGFB3-204ENST00000556285 THSD7BQ9C0I4 1608 aa17.41■□□□□ 0.38
TGFB3-204ENST00000556285 PPP1R42Q7Z4L9 355 aa17.41■□□□□ 0.38
TGFB3-204ENST00000556285 RUNDC1Q96C34 613 aa17.41■□□□□ 0.38
TGFB3-204ENST00000556285 RBM17Q96I25 401 aaKnown RBP17.41■□□□□ 0.38
TGFB3-204ENST00000556285 PPEF1O14829 653 aaPredicted RBP17.4■□□□□ 0.38
TGFB3-204ENST00000556285 SCNN1DP51172 638 aa17.4■□□□□ 0.38
TGFB3-204ENST00000556285 PARP10Q53GL7 1025 aa17.4■□□□□ 0.38
TGFB3-204ENST00000556285 UTP14AQ9BVJ6 771 aaKnown RBP17.4■□□□□ 0.38
TGFB3-204ENST00000556285 CLEC11AQ9Y240 323 aa17.4■□□□□ 0.38
TGFB3-204ENST00000556285 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
TGFB3-204ENST00000556285 TMEM88BA6NKF7 163 aa17.39■□□□□ 0.37
TGFB3-204ENST00000556285 HCLS1P14317 486 aaPredicted RBP17.39■□□□□ 0.37
TGFB3-204ENST00000556285 EPS15P42566 896 aa17.39■□□□□ 0.37
TGFB3-204ENST00000556285 SLC10A5Q5PT55 438 aa17.39■□□□□ 0.37
TGFB3-204ENST00000556285 CC2D2BQ6DHV5 1058 aa17.39■□□□□ 0.37
TGFB3-204ENST00000556285 GPC2Q8N158 579 aa17.39■□□□□ 0.37
TGFB3-204ENST00000556285 GJA3Q9Y6H8 435 aa17.39■□□□□ 0.37
TGFB3-204ENST00000556285 LRRC37AA6NMS7 1700 aa17.38■□□□□ 0.37
TGFB3-204ENST00000556285 WDR43Q15061 677 aaKnown RBP eCLIP17.38■□□□□ 0.37
TGFB3-204ENST00000556285 PPP4R3CPQ6ZMV5 832 aa17.38■□□□□ 0.37
TGFB3-204ENST00000556285 NLRP10Q86W26 655 aa17.38■□□□□ 0.37
TGFB3-204ENST00000556285 CNTROBQ8N137 903 aa17.38■□□□□ 0.37
TGFB3-204ENST00000556285 NLRP3Q96P20 1036 aa17.38■□□□□ 0.37
TGFB3-204ENST00000556285 DDX21Q9NR30 783 aaKnown RBP eCLIP17.38■□□□□ 0.37
TGFB3-204ENST00000556285 CHPF2Q9P2E5 772 aa17.38■□□□□ 0.37
TGFB3-204ENST00000556285 LARGE2Q8N3Y3 721 aa17.37■□□□□ 0.37
TGFB3-204ENST00000556285 JDP2Q8WYK2 163 aa17.37■□□□□ 0.37
TGFB3-204ENST00000556285 ABCC4O15439 1325 aa17.37■□□□□ 0.37
TGFB3-204ENST00000556285 TCIRG1Q13488 830 aa17.36■□□□□ 0.37
TGFB3-204ENST00000556285 TRAF5O00463 557 aa17.35■□□□□ 0.37
TGFB3-204ENST00000556285 AOC3Q16853 763 aa17.35■□□□□ 0.37
TGFB3-204ENST00000556285 TRMT112Q9UI30 125 aaKnown RBP17.35■□□□□ 0.37
TGFB3-204ENST00000556285 ATP6V0A2Q9Y487 856 aa17.35■□□□□ 0.37
TGFB3-204ENST00000556285 POLR2AP24928 1970 aaKnown RBP17.35■□□□□ 0.37
TGFB3-204ENST00000556285 RASSF10A6NK89 507 aa17.34■□□□□ 0.37
TGFB3-204ENST00000556285 EIF6P56537 245 aaKnown RBP17.34■□□□□ 0.37
TGFB3-204ENST00000556285 HDGFL1Q5TGJ6 251 aa17.34■□□□□ 0.37
TGFB3-204ENST00000556285 PRKRIP1Q9H875 184 aaPredicted RBP17.34■□□□□ 0.37
TGFB3-204ENST00000556285 WBP1LQ9NX94 342 aa17.34■□□□□ 0.37
TGFB3-204ENST00000556285 PPIP5K2O43314 1243 aa17.33■□□□□ 0.36
TGFB3-204ENST00000556285 GRIPAP1Q4V328 841 aa17.33■□□□□ 0.36
TGFB3-204ENST00000556285 HSP90AB3PQ58FF7 597 aa17.33■□□□□ 0.36
TGFB3-204ENST00000556285 DUSP27Q5VZP5 1158 aa17.33■□□□□ 0.36
TGFB3-204ENST00000556285 PNMA8AQ86V59 439 aaPredicted RBP17.33■□□□□ 0.36
TGFB3-204ENST00000556285 MBIPQ9NS73 344 aa17.33■□□□□ 0.36
TGFB3-204ENST00000556285 SH3TC1Q8TE82 1336 aa17.32■□□□□ 0.36
TGFB3-204ENST00000556285 SHTN1A0MZ66 631 aa17.32■□□□□ 0.36
TGFB3-204ENST00000556285 ATP5J2-PTCD1G3V325 749 aa17.32■□□□□ 0.36
TGFB3-204ENST00000556285 LBX1P52954 281 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms