RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 MYL6BP14649 208 aa19.03■□□□□ 0.64
CHMP4BP1-201ENST00000556017 TNS4Q8IZW8 715 aa19.03■□□□□ 0.64
CHMP4BP1-201ENST00000556017 ZBTB3Q9H5J0 574 aa19.03■□□□□ 0.64
CHMP4BP1-201ENST00000556017 RNF123Q5XPI4 1314 aa19.02■□□□□ 0.64
CHMP4BP1-201ENST00000556017 NYXQ9GZU5 481 aa19.02■□□□□ 0.64
CHMP4BP1-201ENST00000556017 EPHX2P34913 555 aa19.01■□□□□ 0.63
CHMP4BP1-201ENST00000556017 PROSER3Q2NL68 480 aa19.01■□□□□ 0.63
CHMP4BP1-201ENST00000556017 GIGYF2Q6Y7W6 1299 aaKnown RBP19.01■□□□□ 0.63
CHMP4BP1-201ENST00000556017 HACL1Q9UJ83 578 aa19.01■□□□□ 0.63
CHMP4BP1-201ENST00000556017 GTF2E1P29083 439 aaPredicted RBP19■□□□□ 0.63
CHMP4BP1-201ENST00000556017 TAF1P21675 1872 aa19■□□□□ 0.63
CHMP4BP1-201ENST00000556017 ERBB4Q15303 1308 aa19■□□□□ 0.63
CHMP4BP1-201ENST00000556017 EAPPQ56P03 285 aaPredicted RBP18.99■□□□□ 0.63
CHMP4BP1-201ENST00000556017 KIF6Q6ZMV9 814 aa18.99■□□□□ 0.63
CHMP4BP1-201ENST00000556017 GPC2Q8N158 579 aa18.99■□□□□ 0.63
CHMP4BP1-201ENST00000556017 FOXN1O15353 648 aa18.98■□□□□ 0.63
CHMP4BP1-201ENST00000556017 ANXA1P04083 346 aa18.98■□□□□ 0.63
CHMP4BP1-201ENST00000556017 MAP1SQ66K74 1059 aaPredicted RBP18.98■□□□□ 0.63
CHMP4BP1-201ENST00000556017 CC2D2BQ6DHV5 1058 aa18.98■□□□□ 0.63
CHMP4BP1-201ENST00000556017 CRAMP1Q96RY5 1269 aa18.98■□□□□ 0.63
CHMP4BP1-201ENST00000556017 TMEM88BA6NKF7 163 aa18.97■□□□□ 0.63
CHMP4BP1-201ENST00000556017 CAPN15O75808 1086 aa18.97■□□□□ 0.63
CHMP4BP1-201ENST00000556017 VEGFBP49765 207 aa18.97■□□□□ 0.63
CHMP4BP1-201ENST00000556017 SCNN1DP51172 638 aa18.97■□□□□ 0.63
CHMP4BP1-201ENST00000556017 SLC10A5Q5PT55 438 aa18.96■□□□□ 0.63
CHMP4BP1-201ENST00000556017 NEFMP07197 916 aa18.95■□□□□ 0.62
CHMP4BP1-201ENST00000556017 FMR1Q06787 632 aaKnown RBP eCLIP18.95■□□□□ 0.62
CHMP4BP1-201ENST00000556017 PNMA8AQ86V59 439 aaPredicted RBP18.95■□□□□ 0.62
CHMP4BP1-201ENST00000556017 CNTROBQ8N137 903 aa18.95■□□□□ 0.62
CHMP4BP1-201ENST00000556017 RPGRQ92834 1020 aaKnown RBP18.95■□□□□ 0.62
CHMP4BP1-201ENST00000556017 TSPYL4Q9UJ04 414 aa18.95■□□□□ 0.62
CHMP4BP1-201ENST00000556017 TRPM7Q96QT4 1865 aa18.94■□□□□ 0.62
CHMP4BP1-201ENST00000556017 THSD7BQ9C0I4 1608 aa18.94■□□□□ 0.62
CHMP4BP1-201ENST00000556017 RASSF10A6NK89 507 aa18.94■□□□□ 0.62
CHMP4BP1-201ENST00000556017 PPEF1O14829 653 aaPredicted RBP18.94■□□□□ 0.62
CHMP4BP1-201ENST00000556017 TMPOP42166 694 aaKnown RBP18.94■□□□□ 0.62
CHMP4BP1-201ENST00000556017 EPS15P42566 896 aa18.94■□□□□ 0.62
CHMP4BP1-201ENST00000556017 RIPK4P57078 832 aa18.94■□□□□ 0.62
CHMP4BP1-201ENST00000556017 JDP2Q8WYK2 163 aa18.94■□□□□ 0.62
CHMP4BP1-201ENST00000556017 MAPK8IP3Q9UPT6 1336 aa18.94■□□□□ 0.62
CHMP4BP1-201ENST00000556017 DDX60Q8IY21 1712 aaKnown RBP18.94■□□□□ 0.62
CHMP4BP1-201ENST00000556017 COL4A1P02462 1669 aa18.93■□□□□ 0.62
CHMP4BP1-201ENST00000556017 TCERG1O14776 1098 aaKnown RBP18.93■□□□□ 0.62
CHMP4BP1-201ENST00000556017 EIF2S2P20042 333 aaKnown RBP18.93■□□□□ 0.62
CHMP4BP1-201ENST00000556017 KRT24Q2M2I5 525 aa18.93■□□□□ 0.62
CHMP4BP1-201ENST00000556017 PARP10Q53GL7 1025 aa18.93■□□□□ 0.62
CHMP4BP1-201ENST00000556017 RBM17Q96I25 401 aaKnown RBP18.93■□□□□ 0.62
CHMP4BP1-201ENST00000556017 CLEC11AQ9Y240 323 aa18.93■□□□□ 0.62
CHMP4BP1-201ENST00000556017 ABCC4O15439 1325 aa18.93■□□□□ 0.62
CHMP4BP1-201ENST00000556017 DUOX1Q9NRD9 1551 aa18.93■□□□□ 0.62
CHMP4BP1-201ENST00000556017 LRRC37AA6NMS7 1700 aa18.92■□□□□ 0.62
CHMP4BP1-201ENST00000556017 BABAM1Q9NWV8 329 aa18.92■□□□□ 0.62
CHMP4BP1-201ENST00000556017 WBP1LQ9NX94 342 aa18.92■□□□□ 0.62
CHMP4BP1-201ENST00000556017 ATP6V0A2Q9Y487 856 aa18.92■□□□□ 0.62
CHMP4BP1-201ENST00000556017 GJA3Q9Y6H8 435 aa18.92■□□□□ 0.62
CHMP4BP1-201ENST00000556017 GRIPAP1Q4V328 841 aa18.91■□□□□ 0.62
CHMP4BP1-201ENST00000556017 PPP1R42Q7Z4L9 355 aa18.91■□□□□ 0.62
CHMP4BP1-201ENST00000556017 NLRP10Q86W26 655 aa18.91■□□□□ 0.62
CHMP4BP1-201ENST00000556017 LARGE2Q8N3Y3 721 aa18.91■□□□□ 0.62
CHMP4BP1-201ENST00000556017 PNNQ9H307 717 aaKnown RBP18.91■□□□□ 0.62
CHMP4BP1-201ENST00000556017 EIF6P56537 245 aaKnown RBP18.9■□□□□ 0.62
CHMP4BP1-201ENST00000556017 COPS6Q7L5N1 327 aa18.9■□□□□ 0.62
CHMP4BP1-201ENST00000556017 NLRP3Q96P20 1036 aa18.9■□□□□ 0.62
CHMP4BP1-201ENST00000556017 UTP14AQ9BVJ6 771 aaKnown RBP18.9■□□□□ 0.62
CHMP4BP1-201ENST00000556017 RTFDC1Q9BY42 306 aaPredicted RBP18.9■□□□□ 0.62
CHMP4BP1-201ENST00000556017 DDX21Q9NR30 783 aaKnown RBP eCLIP18.9■□□□□ 0.62
CHMP4BP1-201ENST00000556017 TRIM35Q9UPQ4 493 aa18.9■□□□□ 0.62
CHMP4BP1-201ENST00000556017 CHL1O00533 1208 aa18.89■□□□□ 0.61
CHMP4BP1-201ENST00000556017 HCLS1P14317 486 aaPredicted RBP18.89■□□□□ 0.61
CHMP4BP1-201ENST00000556017 AOC3Q16853 763 aa18.89■□□□□ 0.61
CHMP4BP1-201ENST00000556017 XAGE3Q8WTP9 111 aa18.89■□□□□ 0.61
CHMP4BP1-201ENST00000556017 PRDM10Q9NQV6 1147 aa18.89■□□□□ 0.61
CHMP4BP1-201ENST00000556017 RALBP1Q15311 655 aa18.88■□□□□ 0.61
CHMP4BP1-201ENST00000556017 CST9Q5W186 159 aa18.88■□□□□ 0.61
CHMP4BP1-201ENST00000556017 NECTIN2Q92692 538 aa18.88■□□□□ 0.61
CHMP4BP1-201ENST00000556017 TRAF5O00463 557 aa18.87■□□□□ 0.61
CHMP4BP1-201ENST00000556017 PPIP5K2O43314 1243 aa18.87■□□□□ 0.61
CHMP4BP1-201ENST00000556017 CXCL9Q07325 125 aa18.87■□□□□ 0.61
CHMP4BP1-201ENST00000556017 DEFB115Q30KQ5 88 aa18.87■□□□□ 0.61
CHMP4BP1-201ENST00000556017 WDR33Q9C0J8 1336 aaKnown RBP18.86■□□□□ 0.61
CHMP4BP1-201ENST00000556017 AIMP1Q12904 312 aaKnown RBP18.86■□□□□ 0.61
CHMP4BP1-201ENST00000556017 TCIRG1Q13488 830 aa18.86■□□□□ 0.61
CHMP4BP1-201ENST00000556017 USP50Q70EL3 339 aaPredicted RBP18.86■□□□□ 0.61
CHMP4BP1-201ENST00000556017 SP8Q8IXZ3 490 aa18.86■□□□□ 0.61
CHMP4BP1-201ENST00000556017 NIM1KQ8IY84 436 aa18.86■□□□□ 0.61
CHMP4BP1-201ENST00000556017 CCDC146Q8IYE0 955 aa18.86■□□□□ 0.61
CHMP4BP1-201ENST00000556017 VPS33BQ9H267 617 aa18.86■□□□□ 0.61
CHMP4BP1-201ENST00000556017 GPRC5DQ9NZD1 345 aa18.86■□□□□ 0.61
CHMP4BP1-201ENST00000556017 ZNRF3Q9ULT6 936 aa18.85■□□□□ 0.61
CHMP4BP1-201ENST00000556017 BBOX1O75936 387 aa18.84■□□□□ 0.61
CHMP4BP1-201ENST00000556017 LMOD1P29536 600 aaPredicted RBP18.84■□□□□ 0.61
CHMP4BP1-201ENST00000556017 CTCFP49711 727 aaPredicted RBP18.84■□□□□ 0.61
CHMP4BP1-201ENST00000556017 LBX1P52954 281 aa18.84■□□□□ 0.61
CHMP4BP1-201ENST00000556017 KIAA2012Q0VF49 1180 aa18.84■□□□□ 0.61
CHMP4BP1-201ENST00000556017 ZNF428Q96B54 188 aa18.84■□□□□ 0.61
CHMP4BP1-201ENST00000556017 CHPF2Q9P2E5 772 aa18.84■□□□□ 0.61
CHMP4BP1-201ENST00000556017 YDJCA8MPS7 323 aa18.83■□□□□ 0.6
CHMP4BP1-201ENST00000556017 HSPA8P11142 646 aaKnown RBP18.83■□□□□ 0.6
CHMP4BP1-201ENST00000556017 HIRAP54198 1017 aaPredicted RBP18.83■□□□□ 0.6
CHMP4BP1-201ENST00000556017 PGAP2Q9UHJ9 254 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms