RNA–Protein interactions for RNA: ENST00000555935.1

CHD8-209, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 2,617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-209ENST00000555935 RIMBP3BA6NNM3 1639 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 H2AFXP16104 143 aaPredicted RBP9.17□□□□□ -0.94
CHD8-209ENST00000555935 GSDMDP57764 484 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 IQCB1Q15051 598 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 NECTIN1Q15223 517 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 ADCK5Q3MIX3 580 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 PPP1R42Q7Z4L9 355 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 CCAR2Q8N163 923 aaKnown RBP9.17□□□□□ -0.94
CHD8-209ENST00000555935 BICD2Q8TD16 824 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 NOL10Q9BSC4 688 aaKnown RBP9.17□□□□□ -0.94
CHD8-209ENST00000555935 MIS18AQ9NYP9 233 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 RIMBP3Q9UFD9 1639 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 TPCN1Q9ULQ1 816 aa9.17□□□□□ -0.94
CHD8-209ENST00000555935 NAP1L2Q9ULW6 460 aaPredicted RBP9.17□□□□□ -0.94
CHD8-209ENST00000555935 CHD2O14647 1828 aaKnown RBP9.16□□□□□ -0.94
CHD8-209ENST00000555935 CYP2C19P33261 490 aa9.16□□□□□ -0.94
CHD8-209ENST00000555935 DHX8Q14562 1220 aaKnown RBP9.16□□□□□ -0.94
CHD8-209ENST00000555935 STX1AQ16623 288 aa9.16□□□□□ -0.94
CHD8-209ENST00000555935 FERMT3Q86UX7 667 aa9.16□□□□□ -0.94
CHD8-209ENST00000555935 L2HGDHQ9H9P8 463 aa9.16□□□□□ -0.94
CHD8-209ENST00000555935 FAM208AQ9UK61 1670 aaKnown RBP9.16□□□□□ -0.94
CHD8-209ENST00000555935 NR1I2O75469 434 aa9.16□□□□□ -0.94
CHD8-209ENST00000555935 CCZ1BP86790 482 aa9.16□□□□□ -0.94
CHD8-209ENST00000555935 CCZ1P86791 482 aaPredicted RBP9.16□□□□□ -0.94
CHD8-209ENST00000555935 PTH1RQ03431 593 aa9.16□□□□□ -0.94
CHD8-209ENST00000555935 NECAB1Q8N987 351 aa9.16□□□□□ -0.94
CHD8-209ENST00000555935 ERBB3P21860 1342 aa9.15□□□□□ -0.94
CHD8-209ENST00000555935 CCDC69A6NI79 296 aa9.15□□□□□ -0.94
CHD8-209ENST00000555935 USP27XA6NNY8 438 aa9.15□□□□□ -0.94
CHD8-209ENST00000555935 HIP1O00291 1037 aa9.15□□□□□ -0.94
CHD8-209ENST00000555935 GPATCH3Q96I76 525 aa9.15□□□□□ -0.94
CHD8-209ENST00000555935 BABAM1Q9NWV8 329 aa9.15□□□□□ -0.94
CHD8-209ENST00000555935 AKAP12Q02952 1782 aa9.15□□□□□ -0.94
CHD8-209ENST00000555935 KCNJ6P48051 423 aa9.15□□□□□ -0.95
CHD8-209ENST00000555935 MTHFSDQ2M296 383 aaKnown RBP9.15□□□□□ -0.95
CHD8-209ENST00000555935 CREB3L3Q68CJ9 461 aa9.15□□□□□ -0.95
CHD8-209ENST00000555935 ZNF446Q9NWS9 450 aa9.15□□□□□ -0.95
CHD8-209ENST00000555935 IMPACTQ9P2X3 320 aa9.15□□□□□ -0.95
CHD8-209ENST00000555935 NEO1Q92859 1461 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 OVOS2A0A0J9YW53 1432 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 OVOS2Q6IE36 1432 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 ZBTB22O15209 634 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 SRGAP3O43295 1099 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 FAM173BQ6P4H8 233 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 EVI5LQ96CN4 794 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 SIRT1Q96EB6 747 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 PGBD1Q96JS3 809 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 STAG3Q9UJ98 1225 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 CFAP45Q9UL16 551 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 RBM8AQ9Y5S9 174 aaKnown RBP9.14□□□□□ -0.95
CHD8-209ENST00000555935 KDRP35968 1356 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 ERICH4A6NGS2 130 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 BECN2A8MW95 431 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 TEX35Q5T0J7 233 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 MAP4K1Q92918 833 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 OSBPL5Q9H0X9 879 aaPredicted RBP9.14□□□□□ -0.95
CHD8-209ENST00000555935 ZSCAN16Q9H4T2 348 aaPredicted RBP9.14□□□□□ -0.95
CHD8-209ENST00000555935 SNRKQ9NRH2 765 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 ECHDC1Q9NTX5 307 aa9.14□□□□□ -0.95
CHD8-209ENST00000555935 TFIP11Q9UBB9 837 aaKnown RBP9.14□□□□□ -0.95
CHD8-209ENST00000555935 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.14□□□□□ -0.95
CHD8-209ENST00000555935 V9GYY5 206 aaPredicted RBP9.14□□□□□ -0.95
CHD8-209ENST00000555935 USP31Q70CQ4 1352 aa9.13□□□□□ -0.95
CHD8-209ENST00000555935 SETD1AO15047 1707 aaKnown RBP9.13□□□□□ -0.95
CHD8-209ENST00000555935 MAP3K19Q56UN5 1328 aa9.13□□□□□ -0.95
CHD8-209ENST00000555935 SNW1Q13573 536 aaKnown RBP9.13□□□□□ -0.95
CHD8-209ENST00000555935 LARP1Q6PKG0 1096 aaKnown RBP9.13□□□□□ -0.95
CHD8-209ENST00000555935 BLOC1S2Q6QNY1 142 aa9.13□□□□□ -0.95
CHD8-209ENST00000555935 FILIP1Q7Z7B0 1213 aa9.13□□□□□ -0.95
CHD8-209ENST00000555935 CLASRPQ8N2M8 674 aaKnown RBP9.13□□□□□ -0.95
CHD8-209ENST00000555935 ANO10Q9NW15 660 aa9.13□□□□□ -0.95
CHD8-209ENST00000555935 ARGLU1Q9NWB6 273 aaPredicted RBP9.13□□□□□ -0.95
CHD8-209ENST00000555935 FHOD1Q9Y613 1164 aa9.13□□□□□ -0.95
CHD8-209ENST00000555935 LRRC37A3O60309 1634 aa9.13□□□□□ -0.95
CHD8-209ENST00000555935 PSDA5PKW4 1024 aaPredicted RBP9.13□□□□□ -0.95
CHD8-209ENST00000555935 TPM4P67936 248 aa9.13□□□□□ -0.95
CHD8-209ENST00000555935 RESTQ13127 1097 aa9.13□□□□□ -0.95
CHD8-209ENST00000555935 ARID5BQ14865 1188 aa9.13□□□□□ -0.95
CHD8-209ENST00000555935 HSP90AB2PQ58FF8 381 aa9.13□□□□□ -0.95
CHD8-209ENST00000555935 C11orf57Q6ZUT1 292 aaPredicted RBP9.13□□□□□ -0.95
CHD8-209ENST00000555935 CCDC150Q8NCX0 1101 aa9.13□□□□□ -0.95
CHD8-209ENST00000555935 CACNA1FO60840 1977 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 SLC27A2O14975 620 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 ATP8B1O43520 1251 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 FOXO3O43524 673 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 NRDCO43847 1150 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 RPS6KB1P23443 525 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 CCDC93Q567U6 631 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 NAT10Q9H0A0 1025 aaKnown RBP9.12□□□□□ -0.95
CHD8-209ENST00000555935 TRMT1Q9NXH9 659 aaKnown RBP9.12□□□□□ -0.95
CHD8-209ENST00000555935 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.12□□□□□ -0.95
CHD8-209ENST00000555935 HMG20BQ9P0W2 317 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 USP16Q9Y5T5 823 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 CCP110O43303 1012 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 CLCN6P51797 869 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 ERC1Q8IUD2 1116 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 CEP57L1Q8IYX8 460 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 TXLNBQ8N3L3 684 aa9.12□□□□□ -0.95
CHD8-209ENST00000555935 TECPR2O15040 1411 aa9.11□□□□□ -0.95
CHD8-209ENST00000555935 TPM1P09493 284 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms