RNA–Protein interactions for RNA: ENST00000555709.6

MTHFD1-211, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-211ENST00000555709 CT47B1P0C2W7 299 aaPredicted RBP15.11■□□□□ 0.01
MTHFD1-211ENST00000555709 TSPYL6Q8N831 410 aa15.11■□□□□ 0.01
MTHFD1-211ENST00000555709 GPR101Q96P66 508 aaPredicted RBP15.11■□□□□ 0.01
MTHFD1-211ENST00000555709 EPHX2P34913 555 aa15.1■□□□□ 0.01
MTHFD1-211ENST00000555709 CYP4F22Q6NT55 531 aa15.1■□□□□ 0.01
MTHFD1-211ENST00000555709 ZNF622Q969S3 477 aaKnown RBP eCLIP15.1■□□□□ 0.01
MTHFD1-211ENST00000555709 ZNF496Q96IT1 587 aaPredicted RBP15.1■□□□□ 0.01
MTHFD1-211ENST00000555709 HACL1Q9UJ83 578 aa15.1■□□□□ 0.01
MTHFD1-211ENST00000555709 CLEC11AQ9Y240 323 aa15.1■□□□□ 0.01
MTHFD1-211ENST00000555709 SLX4Q8IY92 1834 aa15.1■□□□□ 0.01
MTHFD1-211ENST00000555709 HOXB7P09629 217 aa15.09■□□□□ 0.01
MTHFD1-211ENST00000555709 ECE1P42892 770 aa15.09■□□□□ 0.01
MTHFD1-211ENST00000555709 TWISTNBQ3B726 338 aaPredicted RBP15.09■□□□□ 0.01
MTHFD1-211ENST00000555709 TTC5Q8N0Z6 440 aa15.09■□□□□ 0.01
MTHFD1-211ENST00000555709 DDX21Q9NR30 783 aaKnown RBP eCLIP15.09■□□□□ 0.01
MTHFD1-211ENST00000555709 ZNF541Q9H0D2 1346 aa15.09■□□□□ 0.01
MTHFD1-211ENST00000555709 VAMP4O75379 141 aa15.08■□□□□ 0
MTHFD1-211ENST00000555709 DGKZQ13574 1117 aa15.08■□□□□ 0
MTHFD1-211ENST00000555709 PNMA8AQ86V59 439 aaPredicted RBP15.08■□□□□ 0
MTHFD1-211ENST00000555709 DNAJC10Q8IXB1 793 aa15.08■□□□□ 0
MTHFD1-211ENST00000555709 FMNL2Q96PY5 1086 aa15.08■□□□□ 0
MTHFD1-211ENST00000555709 PDZRN3Q9UPQ7 1066 aa15.08■□□□□ 0
MTHFD1-211ENST00000555709 COL15A1P39059 1388 aa15.08■□□□□ 0
MTHFD1-211ENST00000555709 MAP2K2P36507 400 aa15.07■□□□□ 0
MTHFD1-211ENST00000555709 FMR1Q06787 632 aaKnown RBP eCLIP15.07■□□□□ 01e-9■■■■□ 20.2
MTHFD1-211ENST00000555709 ZNF428Q96B54 188 aa15.07■□□□□ 0
MTHFD1-211ENST00000555709 BRIP1Q9BX63 1249 aa15.07■□□□□ 0
MTHFD1-211ENST00000555709 RCAN3Q9UKA8 241 aa15.07■□□□□ 0
MTHFD1-211ENST00000555709 CACNA1FO60840 1977 aa15.07■□□□□ 0
MTHFD1-211ENST00000555709 ARFGEF2Q9Y6D5 1785 aa15.06■□□□□ 0
MTHFD1-211ENST00000555709 ELL2O00472 640 aaPredicted RBP15.06■□□□□ 0
MTHFD1-211ENST00000555709 CA12O43570 354 aa15.06■□□□□ 0
MTHFD1-211ENST00000555709 AOC2O75106 756 aa15.06■□□□□ 0
MTHFD1-211ENST00000555709 CYP19A1P11511 503 aaPredicted RBP15.06■□□□□ 0
MTHFD1-211ENST00000555709 PRAMEF22A3QJZ6 481 aa15.05■□□□□ -0
MTHFD1-211ENST00000555709 PDE6BP35913 854 aa15.05■□□□□ -0
MTHFD1-211ENST00000555709 RARSP54136 660 aaKnown RBP15.05■□□□□ -0
MTHFD1-211ENST00000555709 GRM1Q13255 1194 aa15.05■□□□□ -0
MTHFD1-211ENST00000555709 CST9Q5W186 159 aa15.05■□□□□ -0
MTHFD1-211ENST00000555709 PAXIP1Q6ZW49 1069 aaPredicted RBP15.05■□□□□ -0
MTHFD1-211ENST00000555709 RNF123Q5XPI4 1314 aa15.05■□□□□ -0
MTHFD1-211ENST00000555709 CACNA1SQ13698 1873 aa15.04■□□□□ -0
MTHFD1-211ENST00000555709 SNRPA1P09661 255 aaKnown RBP15.04■□□□□ -0
MTHFD1-211ENST00000555709 SOX10P56693 466 aa15.04■□□□□ -0
MTHFD1-211ENST00000555709 PRR5LQ6MZQ0 368 aa15.04■□□□□ -0
MTHFD1-211ENST00000555709 PRPF40BQ6NWY9 871 aaKnown RBP15.04■□□□□ -0
MTHFD1-211ENST00000555709 VSIG10Q8N0Z9 540 aa15.04■□□□□ -0
MTHFD1-211ENST00000555709 C7orf43Q8WVR3 580 aa15.04■□□□□ -0
MTHFD1-211ENST00000555709 ZBTB1Q9Y2K1 713 aa15.04■□□□□ -0
MTHFD1-211ENST00000555709 TLL2Q9Y6L7 1015 aa15.04■□□□□ -0
MTHFD1-211ENST00000555709 TRPM7Q96QT4 1865 aa15.03■□□□□ -0
MTHFD1-211ENST00000555709 ALDH1L2Q3SY69 923 aa15.03■□□□□ -0
MTHFD1-211ENST00000555709 SOGA3Q5TF21 947 aa15.03■□□□□ -0
MTHFD1-211ENST00000555709 BICDL1Q6ZP65 573 aa15.03■□□□□ -0
MTHFD1-211ENST00000555709 CCDC24Q8N4L8 307 aa15.03■□□□□ -0
MTHFD1-211ENST00000555709 SSH1Q8WYL5 1049 aa15.03■□□□□ -0
MTHFD1-211ENST00000555709 CNKSR1Q969H4 720 aa15.03■□□□□ -0
MTHFD1-211ENST00000555709 HDGFL1Q5TGJ6 251 aa15.02■□□□□ -0
MTHFD1-211ENST00000555709 STYK1Q6J9G0 422 aa15.02■□□□□ -0
MTHFD1-211ENST00000555709 FZD9O00144 591 aa15.01□□□□□ -0.01
MTHFD1-211ENST00000555709 SRGNP10124 158 aa15.01□□□□□ -0.01
MTHFD1-211ENST00000555709 TBC1D9BQ66K14 1250 aa15.01□□□□□ -0.01
MTHFD1-211ENST00000555709 BCL2L13Q9BXK5 485 aa15.01□□□□□ -0.01
MTHFD1-211ENST00000555709 BCAR3O75815 825 aa15□□□□□ -0.01
MTHFD1-211ENST00000555709 BRPF1P55201 1214 aaPredicted RBP15□□□□□ -0.01
MTHFD1-211ENST00000555709 CCDC30Q5VVM6 783 aa15□□□□□ -0.01
MTHFD1-211ENST00000555709 ZNF277Q9NRM2 450 aaPredicted RBP15□□□□□ -0.01
MTHFD1-211ENST00000555709 SMC4Q9NTJ3 1288 aa15□□□□□ -0.01
MTHFD1-211ENST00000555709 USP16Q9Y5T5 823 aa15□□□□□ -0.01
MTHFD1-211ENST00000555709 ERBB4Q15303 1308 aa14.99□□□□□ -0.01
MTHFD1-211ENST00000555709 TRAF5O00463 557 aa14.99□□□□□ -0.01
MTHFD1-211ENST00000555709 TCERG1O14776 1098 aaKnown RBP14.99□□□□□ -0.01
MTHFD1-211ENST00000555709 FKBP4Q02790 459 aaKnown RBP eCLIP14.99□□□□□ -0.01
MTHFD1-211ENST00000555709 CCDC93Q567U6 631 aa14.99□□□□□ -0.01
MTHFD1-211ENST00000555709 GPC2Q8N158 579 aa14.99□□□□□ -0.01
MTHFD1-211ENST00000555709 MRPL50Q8N5N7 158 aaKnown RBP14.99□□□□□ -0.01
MTHFD1-211ENST00000555709 CHMP4AQ9BY43 222 aa14.99□□□□□ -0.01
MTHFD1-211ENST00000555709 SCN7AQ01118 1682 aa14.98□□□□□ -0.01
MTHFD1-211ENST00000555709 EIF2S2P20042 333 aaKnown RBP14.98□□□□□ -0.01
MTHFD1-211ENST00000555709 EIF5P55010 431 aaKnown RBP14.98□□□□□ -0.01
MTHFD1-211ENST00000555709 SAPCD2Q86UD0 394 aa14.98□□□□□ -0.01
MTHFD1-211ENST00000555709 NECTIN2Q92692 538 aa14.98□□□□□ -0.01
MTHFD1-211ENST00000555709 MASTLQ96GX5 879 aa14.98□□□□□ -0.01
MTHFD1-211ENST00000555709 TEX13AQ9BXU3 409 aaPredicted RBP14.98□□□□□ -0.01
MTHFD1-211ENST00000555709 CHPF2Q9P2E5 772 aa14.98□□□□□ -0.01
MTHFD1-211ENST00000555709 KIF16BQ96L93 1317 aa14.97□□□□□ -0.01
MTHFD1-211ENST00000555709 RRP1P56182 461 aaKnown RBP14.97□□□□□ -0.01
MTHFD1-211ENST00000555709 PDIA6Q15084 440 aa14.97□□□□□ -0.01
MTHFD1-211ENST00000555709 PROSER3Q2NL68 480 aa14.97□□□□□ -0.01
MTHFD1-211ENST00000555709 LRP10Q7Z4F1 713 aa14.97□□□□□ -0.01
MTHFD1-211ENST00000555709 STK31Q9BXU1 1019 aa14.97□□□□□ -0.01
MTHFD1-211ENST00000555709 CIAPIN1Q6FI81 312 aa14.96□□□□□ -0.01
MTHFD1-211ENST00000555709 HHIPL1Q96JK4 782 aa14.96□□□□□ -0.01
MTHFD1-211ENST00000555709 DBF4Q9UBU7 674 aaPredicted RBP14.96□□□□□ -0.01
MTHFD1-211ENST00000555709 SUPT16HQ9Y5B9 1047 aaKnown RBP14.96□□□□□ -0.01
MTHFD1-211ENST00000555709 NBPF26B4DH59 902 aa14.95□□□□□ -0.02
MTHFD1-211ENST00000555709 STARD3NLO95772 234 aa14.95□□□□□ -0.02
MTHFD1-211ENST00000555709 CANXP27824 592 aaKnown RBP14.95□□□□□ -0.02
MTHFD1-211ENST00000555709 NBPF10Q6P3W6 841 aaKnown RBP14.95□□□□□ -0.02
MTHFD1-211ENST00000555709 OLFM4Q6UX06 510 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms