RNA–Protein interactions for RNA: ENST00000555576.5

TUBB3-208, Transcript of tubulin beta 3 class III, humanhuman

TSL 4 BASIC

Gene TUBB3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-208ENST00000555576 HACL1Q9UJ83 578 aa17.55■□□□□ 0.4
TUBB3-208ENST00000555576 RRP7AQ9Y3A4 280 aaKnown RBP17.55■□□□□ 0.4
TUBB3-208ENST00000555576 RNF123Q5XPI4 1314 aa17.54■□□□□ 0.4
TUBB3-208ENST00000555576 NEFMP07197 916 aa17.54■□□□□ 0.4
TUBB3-208ENST00000555576 GPTP24298 496 aa17.54■□□□□ 0.4
TUBB3-208ENST00000555576 GTF2E1P29083 439 aaPredicted RBP17.54■□□□□ 0.4
TUBB3-208ENST00000555576 EPHX2P34913 555 aa17.54■□□□□ 0.4
TUBB3-208ENST00000555576 PDIA6Q15084 440 aa17.54■□□□□ 0.4
TUBB3-208ENST00000555576 GIGYF2Q6Y7W6 1299 aaKnown RBP17.54■□□□□ 0.4
TUBB3-208ENST00000555576 C3orf67Q6ZVT6 689 aa17.54■□□□□ 0.4
TUBB3-208ENST00000555576 GPC2Q8N158 579 aa17.53■□□□□ 0.4
TUBB3-208ENST00000555576 ANKRD36CQ5JPF3 1778 aa17.53■□□□□ 0.4
TUBB3-208ENST00000555576 EAPPQ56P03 285 aaPredicted RBP17.52■□□□□ 0.4
TUBB3-208ENST00000555576 CC2D2BQ6DHV5 1058 aa17.52■□□□□ 0.4
TUBB3-208ENST00000555576 MAPK8IP3Q9UPT6 1336 aa17.51■□□□□ 0.39
TUBB3-208ENST00000555576 LAMB2P55268 1798 aa17.51■□□□□ 0.39
TUBB3-208ENST00000555576 PROSER3Q2NL68 480 aa17.51■□□□□ 0.39
TUBB3-208ENST00000555576 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
TUBB3-208ENST00000555576 TMEM88BA6NKF7 163 aa17.5■□□□□ 0.39
TUBB3-208ENST00000555576 PNMA8AQ86V59 439 aaPredicted RBP17.5■□□□□ 0.39
TUBB3-208ENST00000555576 RPGRQ92834 1020 aaKnown RBP17.5■□□□□ 0.39
TUBB3-208ENST00000555576 TSPYL4Q9UJ04 414 aa17.5■□□□□ 0.39
TUBB3-208ENST00000555576 PPEF1O14829 653 aaPredicted RBP17.49■□□□□ 0.39
TUBB3-208ENST00000555576 SCNN1DP51172 638 aa17.49■□□□□ 0.39
TUBB3-208ENST00000555576 GRIPAP1Q4V328 841 aa17.49■□□□□ 0.39
TUBB3-208ENST00000555576 MAP1SQ66K74 1059 aaPredicted RBP17.49■□□□□ 0.39
TUBB3-208ENST00000555576 PNNQ9H307 717 aaKnown RBP17.49■□□□□ 0.39
TUBB3-208ENST00000555576 THSD7BQ9C0I4 1608 aa17.49■□□□□ 0.39
TUBB3-208ENST00000555576 FOXN1O15353 648 aa17.48■□□□□ 0.39
TUBB3-208ENST00000555576 VEGFBP49765 207 aa17.48■□□□□ 0.39
TUBB3-208ENST00000555576 PARP10Q53GL7 1025 aa17.48■□□□□ 0.39
TUBB3-208ENST00000555576 CNTROBQ8N137 903 aa17.48■□□□□ 0.39
TUBB3-208ENST00000555576 JDP2Q8WYK2 163 aa17.48■□□□□ 0.39
TUBB3-208ENST00000555576 RBM17Q96I25 401 aaKnown RBP17.48■□□□□ 0.39
TUBB3-208ENST00000555576 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
TUBB3-208ENST00000555576 RASSF10A6NK89 507 aa17.47■□□□□ 0.39
TUBB3-208ENST00000555576 CAPN15O75808 1086 aa17.47■□□□□ 0.39
TUBB3-208ENST00000555576 ANXA1P04083 346 aa17.47■□□□□ 0.39
TUBB3-208ENST00000555576 SLC10A5Q5PT55 438 aa17.47■□□□□ 0.39
TUBB3-208ENST00000555576 PPP1R42Q7Z4L9 355 aa17.47■□□□□ 0.39
TUBB3-208ENST00000555576 ABCC4O15439 1325 aa17.47■□□□□ 0.39
TUBB3-208ENST00000555576 TMPOP42166 694 aaKnown RBP17.46■□□□□ 0.39
TUBB3-208ENST00000555576 EIF6P56537 245 aaKnown RBP17.46■□□□□ 0.39
TUBB3-208ENST00000555576 RIPK4P57078 832 aa17.46■□□□□ 0.39
TUBB3-208ENST00000555576 LARGE2Q8N3Y3 721 aa17.46■□□□□ 0.39
TUBB3-208ENST00000555576 DUOX1Q9NRD9 1551 aa17.45■□□□□ 0.38
TUBB3-208ENST00000555576 EIF2S2P20042 333 aaKnown RBP17.45■□□□□ 0.38
TUBB3-208ENST00000555576 EPS15P42566 896 aa17.45■□□□□ 0.38
TUBB3-208ENST00000555576 UTP14AQ9BVJ6 771 aaKnown RBP17.45■□□□□ 0.38
TUBB3-208ENST00000555576 CLEC11AQ9Y240 323 aa17.45■□□□□ 0.38
TUBB3-208ENST00000555576 ATP6V0A2Q9Y487 856 aa17.45■□□□□ 0.38
TUBB3-208ENST00000555576 GJA3Q9Y6H8 435 aa17.45■□□□□ 0.38
TUBB3-208ENST00000555576 LRRC37AA6NMS7 1700 aa17.44■□□□□ 0.38
TUBB3-208ENST00000555576 RALBP1Q15311 655 aa17.44■□□□□ 0.38
TUBB3-208ENST00000555576 NLRP3Q96P20 1036 aa17.44■□□□□ 0.38
TUBB3-208ENST00000555576 RTFDC1Q9BY42 306 aaPredicted RBP17.44■□□□□ 0.38
TUBB3-208ENST00000555576 DDX21Q9NR30 783 aaKnown RBP eCLIP17.44■□□□□ 0.38
TUBB3-208ENST00000555576 WBP1LQ9NX94 342 aa17.44■□□□□ 0.38
TUBB3-208ENST00000555576 TCERG1O14776 1098 aaKnown RBP17.43■□□□□ 0.38
TUBB3-208ENST00000555576 AOC3Q16853 763 aa17.43■□□□□ 0.38
TUBB3-208ENST00000555576 NLRP10Q86W26 655 aa17.43■□□□□ 0.38
TUBB3-208ENST00000555576 PRDM10Q9NQV6 1147 aa17.43■□□□□ 0.38
TUBB3-208ENST00000555576 DDX60Q8IY21 1712 aaKnown RBP17.43■□□□□ 0.38
TUBB3-208ENST00000555576 PPIP5K2O43314 1243 aa17.42■□□□□ 0.38
TUBB3-208ENST00000555576 FMR1Q06787 632 aaKnown RBP eCLIP17.42■□□□□ 0.38
TUBB3-208ENST00000555576 LMOD3Q0VAK6 560 aa17.42■□□□□ 0.38
TUBB3-208ENST00000555576 KRT24Q2M2I5 525 aa17.42■□□□□ 0.38
TUBB3-208ENST00000555576 COPS6Q7L5N1 327 aa17.42■□□□□ 0.38
TUBB3-208ENST00000555576 NIM1KQ8IY84 436 aa17.42■□□□□ 0.38
TUBB3-208ENST00000555576 XAGE3Q8WTP9 111 aa17.42■□□□□ 0.38
TUBB3-208ENST00000555576 VPS33BQ9H267 617 aa17.42■□□□□ 0.38
TUBB3-208ENST00000555576 TRPM7Q96QT4 1865 aa17.41■□□□□ 0.38
TUBB3-208ENST00000555576 CHL1O00533 1208 aa17.41■□□□□ 0.38
TUBB3-208ENST00000555576 LMOD1P29536 600 aaPredicted RBP17.41■□□□□ 0.38
TUBB3-208ENST00000555576 TRIM35Q9UPQ4 493 aa17.41■□□□□ 0.38
TUBB3-208ENST00000555576 COL4A1P02462 1669 aa17.41■□□□□ 0.38
TUBB3-208ENST00000555576 TAF1P21675 1872 aa17.41■□□□□ 0.38
TUBB3-208ENST00000555576 DEFB115Q30KQ5 88 aa17.4■□□□□ 0.38
TUBB3-208ENST00000555576 HSP90AB3PQ58FF7 597 aa17.4■□□□□ 0.38
TUBB3-208ENST00000555576 USP50Q70EL3 339 aaPredicted RBP17.4■□□□□ 0.38
TUBB3-208ENST00000555576 NECTIN2Q92692 538 aa17.4■□□□□ 0.38
TUBB3-208ENST00000555576 GPRC5DQ9NZD1 345 aa17.4■□□□□ 0.38
TUBB3-208ENST00000555576 WDR33Q9C0J8 1336 aaKnown RBP17.4■□□□□ 0.38
TUBB3-208ENST00000555576 HCLS1P14317 486 aaPredicted RBP17.39■□□□□ 0.37
TUBB3-208ENST00000555576 CTCFP49711 727 aaPredicted RBP17.39■□□□□ 0.37
TUBB3-208ENST00000555576 CXCL9Q07325 125 aa17.39■□□□□ 0.37
TUBB3-208ENST00000555576 TCIRG1Q13488 830 aa17.39■□□□□ 0.37
TUBB3-208ENST00000555576 SP8Q8IXZ3 490 aa17.39■□□□□ 0.37
TUBB3-208ENST00000555576 ZNRF3Q9ULT6 936 aa17.39■□□□□ 0.37
TUBB3-208ENST00000555576 MYBBP1AQ9BQG0 1328 aaKnown RBP17.39■□□□□ 0.37
TUBB3-208ENST00000555576 TRAF5O00463 557 aa17.38■□□□□ 0.37
TUBB3-208ENST00000555576 BBOX1O75936 387 aa17.38■□□□□ 0.37
TUBB3-208ENST00000555576 KIAA2012Q0VF49 1180 aa17.38■□□□□ 0.37
TUBB3-208ENST00000555576 AIMP1Q12904 312 aaKnown RBP17.38■□□□□ 0.37
TUBB3-208ENST00000555576 CST9Q5W186 159 aa17.38■□□□□ 0.37
TUBB3-208ENST00000555576 CCDC146Q8IYE0 955 aa17.38■□□□□ 0.37
TUBB3-208ENST00000555576 ADARB2Q9NS39 739 aaKnown RBP17.38■□□□□ 0.37
TUBB3-208ENST00000555576 CHPF2Q9P2E5 772 aa17.38■□□□□ 0.37
TUBB3-208ENST00000555576 ABT1Q9ULW3 272 aaKnown RBP17.38■□□□□ 0.37
TUBB3-208ENST00000555576 HSPA8P11142 646 aaKnown RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms