RNA–Protein interactions for RNA: ENST00000555052.1

ARHGEF40-205, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 3

Gene ARHGEF40, Length 935 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-205ENST00000555052 LMOD3Q0VAK6 560 aa20.61■□□□□ 0.89
ARHGEF40-205ENST00000555052 CC2D2BQ6DHV5 1058 aa20.61■□□□□ 0.89
ARHGEF40-205ENST00000555052 LDHDQ86WU2 507 aa20.61■□□□□ 0.89
ARHGEF40-205ENST00000555052 COL4A5P29400 1685 aa20.61■□□□□ 0.89
ARHGEF40-205ENST00000555052 MYBBP1AQ9BQG0 1328 aaKnown RBP20.6■□□□□ 0.89
ARHGEF40-205ENST00000555052 ADAMTSL1Q8N6G6 1762 aa20.6■□□□□ 0.89
ARHGEF40-205ENST00000555052 PARP10Q53GL7 1025 aa20.6■□□□□ 0.89
ARHGEF40-205ENST00000555052 C3orf67Q6ZVT6 689 aa20.6■□□□□ 0.89
ARHGEF40-205ENST00000555052 RPGRQ92834 1020 aaKnown RBP20.6■□□□□ 0.89
ARHGEF40-205ENST00000555052 PASKQ96RG2 1323 aa20.59■□□□□ 0.89
ARHGEF40-205ENST00000555052 ANXA1P04083 346 aa20.59■□□□□ 0.89
ARHGEF40-205ENST00000555052 EIF2S2P20042 333 aaKnown RBP20.59■□□□□ 0.89
ARHGEF40-205ENST00000555052 SLC51AQ86UW1 340 aa20.59■□□□□ 0.89
ARHGEF40-205ENST00000555052 CRAMP1Q96RY5 1269 aa20.59■□□□□ 0.89
ARHGEF40-205ENST00000555052 CREBZFQ9NS37 354 aa20.59■□□□□ 0.89
ARHGEF40-205ENST00000555052 DDX10Q13206 875 aaKnown RBP20.58■□□□□ 0.89
ARHGEF40-205ENST00000555052 PPP1R42Q7Z4L9 355 aa20.58■□□□□ 0.89
ARHGEF40-205ENST00000555052 ANKRD36CQ5JPF3 1778 aa20.57■□□□□ 0.88
ARHGEF40-205ENST00000555052 COL13A1Q5TAT6 717 aaPredicted RBP20.57■□□□□ 0.88
ARHGEF40-205ENST00000555052 RBM17Q96I25 401 aaKnown RBP20.57■□□□□ 0.88
ARHGEF40-205ENST00000555052 HACL1Q9UJ83 578 aa20.57■□□□□ 0.88
ARHGEF40-205ENST00000555052 CHL1O00533 1208 aa20.56■□□□□ 0.88
ARHGEF40-205ENST00000555052 PPEF1O14829 653 aaPredicted RBP20.56■□□□□ 0.88
ARHGEF40-205ENST00000555052 GRIPAP1Q4V328 841 aa20.56■□□□□ 0.88
ARHGEF40-205ENST00000555052 SLC10A5Q5PT55 438 aa20.56■□□□□ 0.88
ARHGEF40-205ENST00000555052 CCDC146Q8IYE0 955 aa20.56■□□□□ 0.88
ARHGEF40-205ENST00000555052 GPC2Q8N158 579 aa20.56■□□□□ 0.88
ARHGEF40-205ENST00000555052 TRIM35Q9UPQ4 493 aa20.56■□□□□ 0.88
ARHGEF40-205ENST00000555052 RNF123Q5XPI4 1314 aa20.55■□□□□ 0.88
ARHGEF40-205ENST00000555052 JDP2Q8WYK2 163 aa20.55■□□□□ 0.88
ARHGEF40-205ENST00000555052 UTP14AQ9BVJ6 771 aaKnown RBP20.55■□□□□ 0.88
ARHGEF40-205ENST00000555052 ITGBL1O95965 494 aaPredicted RBP20.54■□□□□ 0.88
ARHGEF40-205ENST00000555052 HSPA1AP0DMV8 641 aaKnown RBP20.54■□□□□ 0.88
ARHGEF40-205ENST00000555052 HSPA1BP0DMV9 641 aaKnown RBP20.54■□□□□ 0.88
ARHGEF40-205ENST00000555052 EPHX2P34913 555 aa20.54■□□□□ 0.88
ARHGEF40-205ENST00000555052 KRT24Q2M2I5 525 aa20.54■□□□□ 0.88
ARHGEF40-205ENST00000555052 COPS6Q7L5N1 327 aa20.54■□□□□ 0.88
ARHGEF40-205ENST00000555052 XAGE3Q8WTP9 111 aa20.54■□□□□ 0.88
ARHGEF40-205ENST00000555052 LAMB2P55268 1798 aa20.54■□□□□ 0.88
ARHGEF40-205ENST00000555052 NEUROD2Q15784 382 aa20.53■□□□□ 0.88
ARHGEF40-205ENST00000555052 EAPPQ56P03 285 aaPredicted RBP20.53■□□□□ 0.88
ARHGEF40-205ENST00000555052 NECTIN2Q92692 538 aa20.53■□□□□ 0.88
ARHGEF40-205ENST00000555052 RUNDC1Q96C34 613 aa20.53■□□□□ 0.88
ARHGEF40-205ENST00000555052 NLRP3Q96P20 1036 aa20.53■□□□□ 0.88
ARHGEF40-205ENST00000555052 DDX21Q9NR30 783 aaKnown RBP eCLIP20.53■□□□□ 0.88
ARHGEF40-205ENST00000555052 LTBP1Q14766 1721 aa20.53■□□□□ 0.88
ARHGEF40-205ENST00000555052 CNTNAP1P78357 1384 aa20.52■□□□□ 0.88
ARHGEF40-205ENST00000555052 HSP90AB3PQ58FF7 597 aa20.52■□□□□ 0.88
ARHGEF40-205ENST00000555052 PNMA8AQ86V59 439 aaPredicted RBP20.52■□□□□ 0.88
ARHGEF40-205ENST00000555052 NLRP10Q86W26 655 aa20.52■□□□□ 0.88
ARHGEF40-205ENST00000555052 ABCC4O15439 1325 aa20.52■□□□□ 0.87
ARHGEF40-205ENST00000555052 LARGE2Q8N3Y3 721 aa20.51■□□□□ 0.87
ARHGEF40-205ENST00000555052 MKRN1Q9UHC7 482 aaKnown RBP20.51■□□□□ 0.87
ARHGEF40-205ENST00000555052 ATP6V0A2Q9Y487 856 aa20.51■□□□□ 0.87
ARHGEF40-205ENST00000555052 TCERG1O14776 1098 aaKnown RBP20.5■□□□□ 0.87
ARHGEF40-205ENST00000555052 EIF6P56537 245 aaKnown RBP20.5■□□□□ 0.87
ARHGEF40-205ENST00000555052 AIMP1Q12904 312 aaKnown RBP20.5■□□□□ 0.87
ARHGEF40-205ENST00000555052 TCIRG1Q13488 830 aa20.5■□□□□ 0.87
ARHGEF40-205ENST00000555052 WDR43Q15061 677 aaKnown RBP eCLIP20.5■□□□□ 0.87
ARHGEF40-205ENST00000555052 ADAMTS8Q9UP79 889 aa20.5■□□□□ 0.87
ARHGEF40-205ENST00000555052 HOXB7P09629 217 aa20.49■□□□□ 0.87
ARHGEF40-205ENST00000555052 SCNN1DP51172 638 aa20.49■□□□□ 0.87
ARHGEF40-205ENST00000555052 CHPF2Q9P2E5 772 aa20.49■□□□□ 0.87
ARHGEF40-205ENST00000555052 GJA3Q9Y6H8 435 aa20.49■□□□□ 0.87
ARHGEF40-205ENST00000555052 TMEM88BA6NKF7 163 aa20.48■□□□□ 0.87
ARHGEF40-205ENST00000555052 HCLS1P14317 486 aaPredicted RBP20.48■□□□□ 0.87
ARHGEF40-205ENST00000555052 RTFDC1Q9BY42 306 aaPredicted RBP20.48■□□□□ 0.87
ARHGEF40-205ENST00000555052 CLEC11AQ9Y240 323 aa20.48■□□□□ 0.87
ARHGEF40-205ENST00000555052 PPIP5K2O43314 1243 aa20.47■□□□□ 0.87
ARHGEF40-205ENST00000555052 HDGFL1Q5TGJ6 251 aa20.47■□□□□ 0.87
ARHGEF40-205ENST00000555052 MAP1SQ66K74 1059 aaPredicted RBP20.47■□□□□ 0.87
ARHGEF40-205ENST00000555052 CNTROBQ8N137 903 aa20.47■□□□□ 0.87
ARHGEF40-205ENST00000555052 VPS33BQ9H267 617 aa20.47■□□□□ 0.87
ARHGEF40-205ENST00000555052 TRMT112Q9UI30 125 aaKnown RBP20.47■□□□□ 0.87
ARHGEF40-205ENST00000555052 LAS1LQ9Y4W2 734 aaKnown RBP20.47■□□□□ 0.87
ARHGEF40-205ENST00000555052 SH3TC1Q8TE82 1336 aa20.47■□□□□ 0.87
ARHGEF40-205ENST00000555052 BBOX1O75936 387 aa20.46■□□□□ 0.87
ARHGEF40-205ENST00000555052 AOC3Q16853 763 aa20.46■□□□□ 0.87
ARHGEF40-205ENST00000555052 NIM1KQ8IY84 436 aa20.46■□□□□ 0.87
ARHGEF40-205ENST00000555052 CFAP44Q96MT7 982 aa20.46■□□□□ 0.87
ARHGEF40-205ENST00000555052 DDX60Q8IY21 1712 aaKnown RBP20.45■□□□□ 0.86
ARHGEF40-205ENST00000555052 LMOD1P29536 600 aaPredicted RBP20.45■□□□□ 0.86
ARHGEF40-205ENST00000555052 EPS15P42566 896 aa20.45■□□□□ 0.86
ARHGEF40-205ENST00000555052 PLBD2Q8NHP8 589 aa20.45■□□□□ 0.86
ARHGEF40-205ENST00000555052 PRKRIP1Q9H875 184 aaPredicted RBP20.45■□□□□ 0.86
ARHGEF40-205ENST00000555052 TAF1P21675 1872 aa20.45■□□□□ 0.86
ARHGEF40-205ENST00000555052 SP8Q8IXZ3 490 aa20.44■□□□□ 0.86
ARHGEF40-205ENST00000555052 TNS4Q8IZW8 715 aa20.44■□□□□ 0.86
ARHGEF40-205ENST00000555052 ISCA1Q9BUE6 129 aa20.44■□□□□ 0.86
ARHGEF40-205ENST00000555052 TMX4Q9H1E5 349 aaPredicted RBP20.44■□□□□ 0.86
ARHGEF40-205ENST00000555052 DBF4Q9UBU7 674 aaPredicted RBP20.44■□□□□ 0.86
ARHGEF40-205ENST00000555052 LRRC37AA6NMS7 1700 aa20.44■□□□□ 0.86
ARHGEF40-205ENST00000555052 DUOX1Q9NRD9 1551 aa20.43■□□□□ 0.86
ARHGEF40-205ENST00000555052 ZNF853P0CG23 659 aa20.43■□□□□ 0.86
ARHGEF40-205ENST00000555052 VEGFBP49765 207 aa20.43■□□□□ 0.86
ARHGEF40-205ENST00000555052 GRAPQ13588 217 aa20.43■□□□□ 0.86
ARHGEF40-205ENST00000555052 ANKRD13DQ6ZTN6 518 aa20.43■□□□□ 0.86
ARHGEF40-205ENST00000555052 DDX46Q7L014 1031 aaKnown RBP20.43■□□□□ 0.86
ARHGEF40-205ENST00000555052 SUPT20HQ8NEM7 779 aa20.43■□□□□ 0.86
ARHGEF40-205ENST00000555052 GRAPLQ8TC17 118 aaPredicted RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms