RNA–Protein interactions for RNA: ENST00000554722.1

GABRB3-207, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 3

Gene GABRB3, Length 406 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-207ENST00000554722 ALDH1B1P30837 517 aa20.5■□□□□ 0.87
GABRB3-207ENST00000554722 COPS6Q7L5N1 327 aa20.5■□□□□ 0.87
GABRB3-207ENST00000554722 NYXQ9GZU5 481 aa20.5■□□□□ 0.87
GABRB3-207ENST00000554722 FKBP4Q02790 459 aaKnown RBP eCLIP20.49■□□□□ 0.87
GABRB3-207ENST00000554722 AIMP1Q12904 312 aaKnown RBP20.49■□□□□ 0.87
GABRB3-207ENST00000554722 RTKN2Q8IZC4 609 aa20.49■□□□□ 0.87
GABRB3-207ENST00000554722 XAGE3Q8WTP9 111 aa20.49■□□□□ 0.87
GABRB3-207ENST00000554722 OLFM4Q6UX06 510 aa20.48■□□□□ 0.87
GABRB3-207ENST00000554722 CHPF2Q9P2E5 772 aa20.48■□□□□ 0.87
GABRB3-207ENST00000554722 IQCA1LA6NCM1 817 aa20.47■□□□□ 0.87
GABRB3-207ENST00000554722 NTSR2O95665 410 aa20.47■□□□□ 0.87
GABRB3-207ENST00000554722 CHADLQ6NUI6 762 aa20.47■□□□□ 0.87
GABRB3-207ENST00000554722 DDX21Q9NR30 783 aaKnown RBP eCLIP20.47■□□□□ 0.87
GABRB3-207ENST00000554722 TAF1P21675 1872 aa20.47■□□□□ 0.87
GABRB3-207ENST00000554722 PCNTO95613 3336 aa20.47■□□□□ 0.87
GABRB3-207ENST00000554722 DUSP27Q5VZP5 1158 aa20.46■□□□□ 0.87
GABRB3-207ENST00000554722 ZNF277Q9NRM2 450 aaPredicted RBP20.46■□□□□ 0.87
GABRB3-207ENST00000554722 HDGFL1Q5TGJ6 251 aa20.45■□□□□ 0.86
GABRB3-207ENST00000554722 C3orf67Q6ZVT6 689 aa20.45■□□□□ 0.86
GABRB3-207ENST00000554722 SLC51AQ86UW1 340 aa20.45■□□□□ 0.86
GABRB3-207ENST00000554722 L3MBTL3Q96JM7 780 aaPredicted RBP20.45■□□□□ 0.86
GABRB3-207ENST00000554722 IBTKQ9P2D0 1353 aaPredicted RBP20.45■□□□□ 0.86
GABRB3-207ENST00000554722 CRY2Q49AN0 593 aa20.44■□□□□ 0.86
GABRB3-207ENST00000554722 ZNF428Q96B54 188 aa20.44■□□□□ 0.86
GABRB3-207ENST00000554722 IFT57Q9NWB7 429 aa20.44■□□□□ 0.86
GABRB3-207ENST00000554722 ELL2O00472 640 aaPredicted RBP20.43■□□□□ 0.86
GABRB3-207ENST00000554722 ANP32CO43423 234 aa20.43■□□□□ 0.86
GABRB3-207ENST00000554722 HOXB7P09629 217 aa20.43■□□□□ 0.86
GABRB3-207ENST00000554722 RPGRQ92834 1020 aaKnown RBP20.43■□□□□ 0.86
GABRB3-207ENST00000554722 MRS2Q9HD23 443 aa20.43■□□□□ 0.86
GABRB3-207ENST00000554722 RIC1Q4ADV7 1423 aa20.43■□□□□ 0.86
GABRB3-207ENST00000554722 DDX60Q8IY21 1712 aaKnown RBP20.42■□□□□ 0.86
GABRB3-207ENST00000554722 IARSP41252 1262 aaKnown RBP20.42■□□□□ 0.86
GABRB3-207ENST00000554722 GNAI1P63096 354 aa20.42■□□□□ 0.86
GABRB3-207ENST00000554722 CC2D2BQ6DHV5 1058 aa20.42■□□□□ 0.86
GABRB3-207ENST00000554722 PPP1R42Q7Z4L9 355 aa20.42■□□□□ 0.86
GABRB3-207ENST00000554722 SYNE4Q8N205 404 aa20.42■□□□□ 0.86
GABRB3-207ENST00000554722 POTEIP0CG38 1075 aa20.41■□□□□ 0.86
GABRB3-207ENST00000554722 POTEJP0CG39 1038 aa20.41■□□□□ 0.86
GABRB3-207ENST00000554722 PARP10Q53GL7 1025 aa20.41■□□□□ 0.86
GABRB3-207ENST00000554722 LDHDQ86WU2 507 aa20.41■□□□□ 0.86
GABRB3-207ENST00000554722 C8orf58Q8NAV2 365 aa20.41■□□□□ 0.86
GABRB3-207ENST00000554722 PSMD1Q99460 953 aa20.41■□□□□ 0.86
GABRB3-207ENST00000554722 TAF1DQ9H5J8 278 aaPredicted RBP20.41■□□□□ 0.86
GABRB3-207ENST00000554722 CREBZFQ9NS37 354 aa20.41■□□□□ 0.86
GABRB3-207ENST00000554722 HOXA10P31260 410 aaPredicted RBP20.4■□□□□ 0.86
GABRB3-207ENST00000554722 TCIRG1Q13488 830 aa20.4■□□□□ 0.86
GABRB3-207ENST00000554722 NLRP10Q86W26 655 aa20.4■□□□□ 0.86
GABRB3-207ENST00000554722 SNED1Q8TER0 1413 aa20.4■□□□□ 0.86
GABRB3-207ENST00000554722 UTP14AQ9BVJ6 771 aaKnown RBP20.4■□□□□ 0.86
GABRB3-207ENST00000554722 ZNF541Q9H0D2 1346 aa20.4■□□□□ 0.86
GABRB3-207ENST00000554722 DBF4Q9UBU7 674 aaPredicted RBP20.4■□□□□ 0.86
GABRB3-207ENST00000554722 GRIPAP1Q4V328 841 aa20.39■□□□□ 0.85
GABRB3-207ENST00000554722 TSPYL6Q8N831 410 aa20.39■□□□□ 0.85
GABRB3-207ENST00000554722 JDP2Q8WYK2 163 aa20.39■□□□□ 0.85
GABRB3-207ENST00000554722 PHAXQ9H814 394 aaKnown RBP20.39■□□□□ 0.85
GABRB3-207ENST00000554722 HACL1Q9UJ83 578 aa20.39■□□□□ 0.85
GABRB3-207ENST00000554722 FZD9O00144 591 aa20.38■□□□□ 0.85
GABRB3-207ENST00000554722 SLC10A5Q5PT55 438 aa20.38■□□□□ 0.85
GABRB3-207ENST00000554722 COL13A1Q5TAT6 717 aaPredicted RBP20.38■□□□□ 0.85
GABRB3-207ENST00000554722 TSR2Q969E8 191 aaKnown RBP20.38■□□□□ 0.85
GABRB3-207ENST00000554722 RBM17Q96I25 401 aaKnown RBP20.38■□□□□ 0.85
GABRB3-207ENST00000554722 CALD1Q05682 793 aaKnown RBP20.37■□□□□ 0.85
GABRB3-207ENST00000554722 EAPPQ56P03 285 aaPredicted RBP20.37■□□□□ 0.85
GABRB3-207ENST00000554722 HSP90AB3PQ58FF7 597 aa20.37■□□□□ 0.85
GABRB3-207ENST00000554722 ANKRD13DQ6ZTN6 518 aa20.37■□□□□ 0.85
GABRB3-207ENST00000554722 WWC1Q8IX03 1113 aa20.37■□□□□ 0.85
GABRB3-207ENST00000554722 PLBD2Q8NHP8 589 aa20.37■□□□□ 0.85
GABRB3-207ENST00000554722 CRAMP1Q96RY5 1269 aa20.37■□□□□ 0.85
GABRB3-207ENST00000554722 SCN4AP35499 1836 aa20.37■□□□□ 0.85
GABRB3-207ENST00000554722 HSPA1AP0DMV8 641 aaKnown RBP20.36■□□□□ 0.85
GABRB3-207ENST00000554722 HSPA1BP0DMV9 641 aaKnown RBP20.36■□□□□ 0.85
GABRB3-207ENST00000554722 HCLS1P14317 486 aaPredicted RBP20.36■□□□□ 0.85
GABRB3-207ENST00000554722 CCDC27Q2M243 656 aa20.36■□□□□ 0.85
GABRB3-207ENST00000554722 GPC2Q8N158 579 aa20.36■□□□□ 0.85
GABRB3-207ENST00000554722 ISCA1Q9BUE6 129 aa20.36■□□□□ 0.85
GABRB3-207ENST00000554722 HYPKQ9NX55 129 aa20.36■□□□□ 0.85
GABRB3-207ENST00000554722 CLEC11AQ9Y240 323 aa20.36■□□□□ 0.85
GABRB3-207ENST00000554722 ATP5J2-PTCD1G3V325 749 aa20.35■□□□□ 0.85
GABRB3-207ENST00000554722 TCERG1O14776 1098 aaKnown RBP20.35■□□□□ 0.85
GABRB3-207ENST00000554722 EPHX2P34913 555 aa20.35■□□□□ 0.85
GABRB3-207ENST00000554722 PNMA8AQ86V59 439 aaPredicted RBP20.35■□□□□ 0.85
GABRB3-207ENST00000554722 NLRP3Q96P20 1036 aa20.35■□□□□ 0.85
GABRB3-207ENST00000554722 COL4A5P29400 1685 aa20.35■□□□□ 0.85
GABRB3-207ENST00000554722 PPEF1O14829 653 aaPredicted RBP20.34■□□□□ 0.85
GABRB3-207ENST00000554722 EIF6P56537 245 aaKnown RBP20.34■□□□□ 0.85
GABRB3-207ENST00000554722 TMX4Q9H1E5 349 aaPredicted RBP20.34■□□□□ 0.85
GABRB3-207ENST00000554722 MKRN1Q9UHC7 482 aaKnown RBP20.34■□□□□ 0.85
GABRB3-207ENST00000554722 TRMT112Q9UI30 125 aaKnown RBP20.34■□□□□ 0.85
GABRB3-207ENST00000554722 SALL2Q9Y467 1007 aaPredicted RBP20.34■□□□□ 0.85
GABRB3-207ENST00000554722 COL4A1P02462 1669 aa20.34■□□□□ 0.85
GABRB3-207ENST00000554722 RNF123Q5XPI4 1314 aa20.33■□□□□ 0.85
GABRB3-207ENST00000554722 PASKQ96RG2 1323 aa20.33■□□□□ 0.85
GABRB3-207ENST00000554722 LARGE2Q8N3Y3 721 aa20.33■□□□□ 0.85
GABRB3-207ENST00000554722 ABCC4O15439 1325 aa20.32■□□□□ 0.84
GABRB3-207ENST00000554722 GJA3Q9Y6H8 435 aa20.32■□□□□ 0.84
GABRB3-207ENST00000554722 SH3TC1Q8TE82 1336 aa20.31■□□□□ 0.84
GABRB3-207ENST00000554722 TMEM88BA6NKF7 163 aa20.31■□□□□ 0.84
GABRB3-207ENST00000554722 ITGBL1O95965 494 aaPredicted RBP20.31■□□□□ 0.84
GABRB3-207ENST00000554722 TNS4Q8IZW8 715 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms