RNA–Protein interactions for RNA: ENST00000554584.5

SYNE2-212, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 20,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-212ENST00000554584 POLD4Q9HCU8 107 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 AQRO60306 1485 aaKnown RBP eCLIP3.82□□□□□ -1.8
SYNE2-212ENST00000554584 IDEP14735 1019 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 NEK4P51957 841 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 RAD51AP2Q09MP3 1159 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 EEPD1Q7L9B9 569 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 MRPL42Q9Y6G3 142 aaKnown RBP3.82□□□□□ -1.8
SYNE2-212ENST00000554584 NINQ8N4C6 2090 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 KIAA0754O94854 1291 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 IGBP1P78318 339 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 PPP2R5AQ15172 486 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 BSPRYQ5W0U4 402 aa3.82□□□□□ -1.8
SYNE2-212ENST00000554584 ARID1BQ8NFD5 2236 aaPredicted RBP3.82□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC91Q7Z6B0 441 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 WIZO95785 1651 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 SPDYE2BA6NHP3 402 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 SPDYE6P0CI01 402 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 ME1P48163 572 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 RALBP1Q15311 655 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 PPP1R13LQ8WUF5 828 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 LPXNO60711 386 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 ZNF594Q96JF6 807 aaPredicted RBP3.81□□□□□ -1.8
SYNE2-212ENST00000554584 OSCARQ8IYS5 282 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 RUFY2Q8WXA3 655 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 BAG1Q99933 345 aaPredicted RBP3.81□□□□□ -1.8
SYNE2-212ENST00000554584 SLC4A2P04920 1241 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 CALM1P0DP23 149 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 CALM2P0DP24 149 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 CALM3P0DP25 149 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 XRCC6P12956 609 aaKnown RBP eCLIP3.81□□□□□ -1.8
SYNE2-212ENST00000554584 RNF31Q96EP0 1072 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 ATICP31939 592 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 CCDC39Q9UFE4 941 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 CWC27Q6UX04 472 aaKnown RBP3.81□□□□□ -1.8
SYNE2-212ENST00000554584 TBC1D7Q9P0N9 293 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 COBLO75128 1261 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 ERLIN2O94905 339 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 LLGL1Q15334 1064 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 GNL3LQ9NVN8 582 aaKnown RBP3.81□□□□□ -1.8
SYNE2-212ENST00000554584 ANKRD35Q8N283 1001 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 ANKFY1Q9P2R3 1169 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 FCHSD1Q86WN1 690 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 SLC12A1Q13621 1099 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 LEKR1Q6ZMV7 388 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 FILIP1Q7Z7B0 1213 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 ZNF444Q8N0Y2 327 aaPredicted RBP3.81□□□□□ -1.8
SYNE2-212ENST00000554584 ATP6V1DQ9Y5K8 247 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 A0A087WWV3 80 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 CRCPO75575 148 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 SEC24BO95487 1268 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 IFFO1Q0D2I5 559 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 CHMP5Q9NZZ3 219 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 BTBD11A6QL63 1104 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 KRT24Q2M2I5 525 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 CC2D2BQ6DHV5 1058 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 CACNA1GO43497 2377 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 KRT9P35527 623 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 NASPP49321 788 aaPredicted RBP3.81□□□□□ -1.8
SYNE2-212ENST00000554584 LRRC23Q53EV4 343 aaPredicted RBP3.81□□□□□ -1.8
SYNE2-212ENST00000554584 POLIQ9UNA4 740 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 POTEJP0CG39 1038 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 HOOK3Q86VS8 718 aa3.81□□□□□ -1.8
SYNE2-212ENST00000554584 G3BP2Q9UN86 482 aaKnown RBP3.81□□□□□ -1.8
SYNE2-212ENST00000554584 CASP2P42575 452 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 PTPN21Q16825 1174 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 TSNARE1Q96NA8 513 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 KAT6AQ92794 2004 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 UBXN2AP68543 259 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 ANO4Q32M45 955 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 NBPF6Q5VWK0 638 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 NBPF5PQ86XG9 351 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-212ENST00000554584 NBPF4Q96M43 638 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 NOB1Q9ULX3 412 aaKnown RBP3.8□□□□□ -1.8
SYNE2-212ENST00000554584 F5H423 210 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-212ENST00000554584 LUZP1Q86V48 1076 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 C11orf74Q86VG3 221 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 MYO6Q9UM54 1294 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 CUL4BQ13620 913 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 CUL5Q93034 780 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 MTERF4Q7Z6M4 381 aaKnown RBP3.8□□□□□ -1.8
SYNE2-212ENST00000554584 UBAC1Q9BSL1 405 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 MYH10P35580 1976 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 CPA1P15085 419 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 NECAB1Q8N987 351 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 RFC1P35251 1148 aaPredicted RBP3.8□□□□□ -1.8
SYNE2-212ENST00000554584 FBXW4P57775 412 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 BRD3Q15059 726 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 TDRD12Q587J7 1177 aaKnown RBP3.8□□□□□ -1.8
SYNE2-212ENST00000554584 JAKMIP3Q5VZ66 844 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 JPH4Q96JJ6 628 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 SELENOSQ9BQE4 189 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 ANLNQ9NQW6 1124 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 PA2G4Q9UQ80 394 aaKnown RBP3.8□□□□□ -1.8
SYNE2-212ENST00000554584 FILIP1LQ4L180 1135 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 NANOGNBQ7Z5D8 188 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 RIOK3O14730 519 aaKnown RBP3.8□□□□□ -1.8
SYNE2-212ENST00000554584 MAN1A1P33908 653 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 FAM98CQ17RN3 349 aaKnown RBP3.8□□□□□ -1.8
SYNE2-212ENST00000554584 MAATS1Q7Z4T9 603 aa3.8□□□□□ -1.8
SYNE2-212ENST00000554584 TMOD3Q9NYL9 352 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms