RNA–Protein interactions for RNA: ENST00000554290.1

CPSF2-203, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 4

Gene CPSF2, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-203ENST00000554290 IARSP41252 1262 aaKnown RBP24.52■■□□□ 1.52
CPSF2-203ENST00000554290 PROSER3Q2NL68 480 aa24.52■■□□□ 1.52
CPSF2-203ENST00000554290 GRIPAP1Q4V328 841 aa24.52■■□□□ 1.52
CPSF2-203ENST00000554290 CHADLQ6NUI6 762 aa24.52■■□□□ 1.52
CPSF2-203ENST00000554290 JMYQ8N9B5 988 aa24.52■■□□□ 1.52
CPSF2-203ENST00000554290 L3MBTL3Q96JM7 780 aaPredicted RBP24.52■■□□□ 1.52
CPSF2-203ENST00000554290 PSMD1Q99460 953 aa24.52■■□□□ 1.52
CPSF2-203ENST00000554290 ADAMTS8Q9UP79 889 aa24.52■■□□□ 1.52
CPSF2-203ENST00000554290 LAS1LQ9Y4W2 734 aaKnown RBP24.52■■□□□ 1.52
CPSF2-203ENST00000554290 ANXA1P04083 346 aa24.51■■□□□ 1.51
CPSF2-203ENST00000554290 NECTIN2Q92692 538 aa24.51■■□□□ 1.51
CPSF2-203ENST00000554290 NLRP3Q96P20 1036 aa24.51■■□□□ 1.51
CPSF2-203ENST00000554290 CRAMP1Q96RY5 1269 aa24.51■■□□□ 1.51
CPSF2-203ENST00000554290 UTP14AQ9BVJ6 771 aaKnown RBP24.51■■□□□ 1.51
CPSF2-203ENST00000554290 HSP90AB3PQ58FF7 597 aa24.5■■□□□ 1.51
CPSF2-203ENST00000554290 COPS6Q7L5N1 327 aa24.5■■□□□ 1.51
CPSF2-203ENST00000554290 TRIM35Q9UPQ4 493 aa24.5■■□□□ 1.51
CPSF2-203ENST00000554290 AIMP1Q12904 312 aaKnown RBP24.49■■□□□ 1.51
CPSF2-203ENST00000554290 JDP2Q8WYK2 163 aa24.49■■□□□ 1.51
CPSF2-203ENST00000554290 DDX21Q9NR30 783 aaKnown RBP eCLIP24.49■■□□□ 1.51
CPSF2-203ENST00000554290 SLC10A5Q5PT55 438 aa24.48■■□□□ 1.51
CPSF2-203ENST00000554290 RNF123Q5XPI4 1314 aa24.48■■□□□ 1.51
CPSF2-203ENST00000554290 XAGE3Q8WTP9 111 aa24.48■■□□□ 1.51
CPSF2-203ENST00000554290 TMX4Q9H1E5 349 aaPredicted RBP24.48■■□□□ 1.51
CPSF2-203ENST00000554290 ZNF541Q9H0D2 1346 aa24.47■■□□□ 1.51
CPSF2-203ENST00000554290 FZD9O00144 591 aa24.47■■□□□ 1.51
CPSF2-203ENST00000554290 TAF1DQ9H5J8 278 aaPredicted RBP24.47■■□□□ 1.51
CPSF2-203ENST00000554290 PRKRIP1Q9H875 184 aaPredicted RBP24.47■■□□□ 1.51
CPSF2-203ENST00000554290 PPEF1O14829 653 aaPredicted RBP24.46■■□□□ 1.51
CPSF2-203ENST00000554290 POTEIP0CG38 1075 aa24.46■■□□□ 1.51
CPSF2-203ENST00000554290 POTEJP0CG39 1038 aa24.46■■□□□ 1.51
CPSF2-203ENST00000554290 HACL1Q9UJ83 578 aa24.46■■□□□ 1.51
CPSF2-203ENST00000554290 HOXB7P09629 217 aa24.45■■□□□ 1.5
CPSF2-203ENST00000554290 KRT24Q2M2I5 525 aa24.45■■□□□ 1.5
CPSF2-203ENST00000554290 C3orf67Q6ZVT6 689 aa24.45■■□□□ 1.5
CPSF2-203ENST00000554290 LDHDQ86WU2 507 aa24.45■■□□□ 1.5
CPSF2-203ENST00000554290 SNED1Q8TER0 1413 aa24.44■■□□□ 1.5
CPSF2-203ENST00000554290 TCERG1O14776 1098 aaKnown RBP24.44■■□□□ 1.5
CPSF2-203ENST00000554290 TCIRG1Q13488 830 aa24.44■■□□□ 1.5
CPSF2-203ENST00000554290 HDGFL1Q5TGJ6 251 aa24.44■■□□□ 1.5
CPSF2-203ENST00000554290 GPC2Q8N158 579 aa24.44■■□□□ 1.5
CPSF2-203ENST00000554290 CFAP44Q96MT7 982 aa24.44■■□□□ 1.5
CPSF2-203ENST00000554290 EIF6P56537 245 aaKnown RBP24.43■■□□□ 1.5
CPSF2-203ENST00000554290 NLRP10Q86W26 655 aa24.43■■□□□ 1.5
CPSF2-203ENST00000554290 CHPF2Q9P2E5 772 aa24.43■■□□□ 1.5
CPSF2-203ENST00000554290 EAPPQ56P03 285 aaPredicted RBP24.42■■□□□ 1.5
CPSF2-203ENST00000554290 PNMA8AQ86V59 439 aaPredicted RBP24.42■■□□□ 1.5
CPSF2-203ENST00000554290 LARGE2Q8N3Y3 721 aa24.42■■□□□ 1.5
CPSF2-203ENST00000554290 DBF4Q9UBU7 674 aaPredicted RBP24.42■■□□□ 1.5
CPSF2-203ENST00000554290 TRMT112Q9UI30 125 aaKnown RBP24.42■■□□□ 1.5
CPSF2-203ENST00000554290 SCN4AP35499 1836 aa24.42■■□□□ 1.5
CPSF2-203ENST00000554290 EPHX2P34913 555 aa24.41■■□□□ 1.5
CPSF2-203ENST00000554290 CREBZFQ9NS37 354 aa24.41■■□□□ 1.5
CPSF2-203ENST00000554290 ATP6V0A2Q9Y487 856 aa24.41■■□□□ 1.5
CPSF2-203ENST00000554290 CLEC11AQ9Y240 323 aa24.4■■□□□ 1.5
CPSF2-203ENST00000554290 SH3TC1Q8TE82 1336 aa24.39■■□□□ 1.5
CPSF2-203ENST00000554290 BBOX1O75936 387 aa24.39■■□□□ 1.49
CPSF2-203ENST00000554290 HCLS1P14317 486 aaPredicted RBP24.39■■□□□ 1.49
CPSF2-203ENST00000554290 ANKRD13DQ6ZTN6 518 aa24.39■■□□□ 1.49
CPSF2-203ENST00000554290 PLBD2Q8NHP8 589 aa24.39■■□□□ 1.49
CPSF2-203ENST00000554290 GJA3Q9Y6H8 435 aa24.39■■□□□ 1.49
CPSF2-203ENST00000554290 ABCC4O15439 1325 aa24.38■■□□□ 1.49
CPSF2-203ENST00000554290 CALD1Q05682 793 aaKnown RBP24.38■■□□□ 1.49
CPSF2-203ENST00000554290 DUSP27Q5VZP5 1158 aa24.38■■□□□ 1.49
CPSF2-203ENST00000554290 SUPT20HQ8NEM7 779 aa24.38■■□□□ 1.49
CPSF2-203ENST00000554290 VPS33BQ9H267 617 aa24.38■■□□□ 1.49
CPSF2-203ENST00000554290 HYPKQ9NX55 129 aa24.38■■□□□ 1.49
CPSF2-203ENST00000554290 DDX46Q7L014 1031 aaKnown RBP24.37■■□□□ 1.49
CPSF2-203ENST00000554290 NIM1KQ8IY84 436 aa24.37■■□□□ 1.49
CPSF2-203ENST00000554290 MBIPQ9NS73 344 aa24.37■■□□□ 1.49
CPSF2-203ENST00000554290 APAF1O14727 1248 aa24.36■■□□□ 1.49
CPSF2-203ENST00000554290 PPIP5K2O43314 1243 aa24.36■■□□□ 1.49
CPSF2-203ENST00000554290 LMOD1P29536 600 aaPredicted RBP24.36■■□□□ 1.49
CPSF2-203ENST00000554290 SP8Q8IXZ3 490 aa24.36■■□□□ 1.49
CPSF2-203ENST00000554290 PASKQ96RG2 1323 aa24.35■■□□□ 1.49
CPSF2-203ENST00000554290 GNAI1P63096 354 aa24.35■■□□□ 1.49
CPSF2-203ENST00000554290 ANKRD36CQ5JPF3 1778 aa24.34■■□□□ 1.49
CPSF2-203ENST00000554290 ITGBL1O95965 494 aaPredicted RBP24.34■■□□□ 1.49
CPSF2-203ENST00000554290 ZNF853P0CG23 659 aa24.34■■□□□ 1.49
CPSF2-203ENST00000554290 DPP8Q6V1X1 898 aaPredicted RBP24.34■■□□□ 1.49
CPSF2-203ENST00000554290 SLC51AQ86UW1 340 aa24.34■■□□□ 1.49
CPSF2-203ENST00000554290 RTFDC1Q9BY42 306 aaPredicted RBP24.34■■□□□ 1.49
CPSF2-203ENST00000554290 IFT57Q9NWB7 429 aa24.34■■□□□ 1.49
CPSF2-203ENST00000554290 GRAPQ13588 217 aa24.33■■□□□ 1.49
CPSF2-203ENST00000554290 AOC3Q16853 763 aa24.33■■□□□ 1.49
CPSF2-203ENST00000554290 MPNDQ8N594 471 aa24.33■■□□□ 1.49
CPSF2-203ENST00000554290 GRAPLQ8TC17 118 aaPredicted RBP24.33■■□□□ 1.49
CPSF2-203ENST00000554290 COL4A5P29400 1685 aa24.32■■□□□ 1.48
CPSF2-203ENST00000554290 TMEM88BA6NKF7 163 aa24.32■■□□□ 1.48
CPSF2-203ENST00000554290 TMC4Q7Z404 712 aa24.32■■□□□ 1.48
CPSF2-203ENST00000554290 ISCA1Q9BUE6 129 aa24.32■■□□□ 1.48
CPSF2-203ENST00000554290 MKRN1Q9UHC7 482 aaKnown RBP24.32■■□□□ 1.48
CPSF2-203ENST00000554290 HSPA1AP0DMV8 641 aaKnown RBP24.31■■□□□ 1.48
CPSF2-203ENST00000554290 HSPA1BP0DMV9 641 aaKnown RBP24.31■■□□□ 1.48
CPSF2-203ENST00000554290 CNTROBQ8N137 903 aa24.31■■□□□ 1.48
CPSF2-203ENST00000554290 ZNRF3Q9ULT6 936 aa24.31■■□□□ 1.48
CPSF2-203ENST00000554290 ATP5J2-PTCD1G3V325 749 aa24.3■■□□□ 1.48
CPSF2-203ENST00000554290 MAP1SQ66K74 1059 aaPredicted RBP24.3■■□□□ 1.48
CPSF2-203ENST00000554290 ZNF428Q96B54 188 aa24.3■■□□□ 1.48
CPSF2-203ENST00000554290 FAM89AQ96GI7 184 aa24.3■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms