RNA–Protein interactions for RNA: ENST00000553361.5

XRCC3-204, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-204ENST00000553361 PRKRIP1Q9H875 184 aaPredicted RBP21.6■■□□□ 1.05
XRCC3-204ENST00000553361 LAMB4A4D0S4 1761 aa21.6■■□□□ 1.05
XRCC3-204ENST00000553361 FER1L6Q2WGJ9 1857 aa21.6■■□□□ 1.05
XRCC3-204ENST00000553361 POTEIP0CG38 1075 aa21.59■■□□□ 1.05
XRCC3-204ENST00000553361 POTEJP0CG39 1038 aa21.59■■□□□ 1.05
XRCC3-204ENST00000553361 NLRP3Q96P20 1036 aa21.59■■□□□ 1.05
XRCC3-204ENST00000553361 CCDC88AQ3V6T2 1871 aa21.58■■□□□ 1.05
XRCC3-204ENST00000553361 TIAM2Q8IVF5 1701 aa21.58■■□□□ 1.05
XRCC3-204ENST00000553361 CC2D2BQ6DHV5 1058 aa21.58■■□□□ 1.05
XRCC3-204ENST00000553361 IBTKQ9P2D0 1353 aaPredicted RBP21.58■■□□□ 1.04
XRCC3-204ENST00000553361 ZNF541Q9H0D2 1346 aa21.57■■□□□ 1.04
XRCC3-204ENST00000553361 IQCA1LA6NCM1 817 aa21.57■■□□□ 1.04
XRCC3-204ENST00000553361 IFFO2Q5TF58 517 aa21.57■■□□□ 1.04
XRCC3-204ENST00000553361 CHADLQ6NUI6 762 aa21.57■■□□□ 1.04
XRCC3-204ENST00000553361 CRAMP1Q96RY5 1269 aa21.57■■□□□ 1.04
XRCC3-204ENST00000553361 DDX21Q9NR30 783 aaKnown RBP eCLIP21.57■■□□□ 1.04
XRCC3-204ENST00000553361 HSP90AB3PQ58FF7 597 aa21.56■■□□□ 1.04
XRCC3-204ENST00000553361 SLC51AQ86UW1 340 aa21.56■■□□□ 1.04
XRCC3-204ENST00000553361 JDP2Q8WYK2 163 aa21.56■■□□□ 1.04
XRCC3-204ENST00000553361 PSMD1Q99460 953 aa21.56■■□□□ 1.04
XRCC3-204ENST00000553361 CHPF2Q9P2E5 772 aa21.56■■□□□ 1.04
XRCC3-204ENST00000553361 PPEF1O14829 653 aaPredicted RBP21.55■■□□□ 1.04
XRCC3-204ENST00000553361 SLC10A5Q5PT55 438 aa21.55■■□□□ 1.04
XRCC3-204ENST00000553361 HDGFL1Q5TGJ6 251 aa21.55■■□□□ 1.04
XRCC3-204ENST00000553361 NLRP10Q86W26 655 aa21.55■■□□□ 1.04
XRCC3-204ENST00000553361 ZNF428Q96B54 188 aa21.55■■□□□ 1.04
XRCC3-204ENST00000553361 L3MBTL3Q96JM7 780 aaPredicted RBP21.55■■□□□ 1.04
XRCC3-204ENST00000553361 TAF1DQ9H5J8 278 aaPredicted RBP21.55■■□□□ 1.04
XRCC3-204ENST00000553361 WDR90Q96KV7 1748 aa21.55■■□□□ 1.04
XRCC3-204ENST00000553361 FZD9O00144 591 aa21.54■■□□□ 1.04
XRCC3-204ENST00000553361 HCLS1P14317 486 aaPredicted RBP21.54■■□□□ 1.04
XRCC3-204ENST00000553361 TCIRG1Q13488 830 aa21.54■■□□□ 1.04
XRCC3-204ENST00000553361 JMYQ8N9B5 988 aa21.54■■□□□ 1.04
XRCC3-204ENST00000553361 CACNA1SQ13698 1873 aa21.54■■□□□ 1.04
XRCC3-204ENST00000553361 APAF1O14727 1248 aa21.53■■□□□ 1.04
XRCC3-204ENST00000553361 EAPPQ56P03 285 aaPredicted RBP21.53■■□□□ 1.04
XRCC3-204ENST00000553361 CFAP44Q96MT7 982 aa21.53■■□□□ 1.04
XRCC3-204ENST00000553361 TMX4Q9H1E5 349 aaPredicted RBP21.53■■□□□ 1.04
XRCC3-204ENST00000553361 TRMT112Q9UI30 125 aaKnown RBP21.53■■□□□ 1.04
XRCC3-204ENST00000553361 PCNTO95613 3336 aa21.52■■□□□ 1.04
XRCC3-204ENST00000553361 LARGE2Q8N3Y3 721 aa21.52■■□□□ 1.04
XRCC3-204ENST00000553361 HACL1Q9UJ83 578 aa21.52■■□□□ 1.04
XRCC3-204ENST00000553361 CLEC11AQ9Y240 323 aa21.52■■□□□ 1.04
XRCC3-204ENST00000553361 RIC1Q4ADV7 1423 aa21.52■■□□□ 1.04
XRCC3-204ENST00000553361 NUP98P52948 1817 aa21.52■■□□□ 1.04
XRCC3-204ENST00000553361 EIF6P56537 245 aaKnown RBP21.51■■□□□ 1.03
XRCC3-204ENST00000553361 GRIPAP1Q4V328 841 aa21.51■■□□□ 1.03
XRCC3-204ENST00000553361 DUSP27Q5VZP5 1158 aa21.51■■□□□ 1.03
XRCC3-204ENST00000553361 LDHDQ86WU2 507 aa21.51■■□□□ 1.03
XRCC3-204ENST00000553361 MBIPQ9NS73 344 aa21.51■■□□□ 1.03
XRCC3-204ENST00000553361 GJA3Q9Y6H8 435 aa21.51■■□□□ 1.03
XRCC3-204ENST00000553361 ARFGEF2Q9Y6D5 1785 aa21.51■■□□□ 1.03
XRCC3-204ENST00000553361 EPHX2P34913 555 aa21.5■■□□□ 1.03
XRCC3-204ENST00000553361 ANKRD13DQ6ZTN6 518 aa21.5■■□□□ 1.03
XRCC3-204ENST00000553361 DBF4Q9UBU7 674 aaPredicted RBP21.5■■□□□ 1.03
XRCC3-204ENST00000553361 ATP6V0A2Q9Y487 856 aa21.5■■□□□ 1.03
XRCC3-204ENST00000553361 DICER1Q9UPY3 1922 aaKnown RBP21.5■■□□□ 1.03
XRCC3-204ENST00000553361 RNF123Q5XPI4 1314 aa21.5■■□□□ 1.03
XRCC3-204ENST00000553361 SNED1Q8TER0 1413 aa21.49■■□□□ 1.03
XRCC3-204ENST00000553361 HOXB7P09629 217 aa21.49■■□□□ 1.03
XRCC3-204ENST00000553361 GPC2Q8N158 579 aa21.49■■□□□ 1.03
XRCC3-204ENST00000553361 PLBD2Q8NHP8 589 aa21.49■■□□□ 1.03
XRCC3-204ENST00000553361 ABCC4O15439 1325 aa21.49■■□□□ 1.03
XRCC3-204ENST00000553361 ATP5J2-PTCD1G3V325 749 aa21.48■■□□□ 1.03
XRCC3-204ENST00000553361 DDX46Q7L014 1031 aaKnown RBP21.48■■□□□ 1.03
XRCC3-204ENST00000553361 SH3TC1Q8TE82 1336 aa21.48■■□□□ 1.03
XRCC3-204ENST00000553361 ELL2O00472 640 aaPredicted RBP21.47■■□□□ 1.03
XRCC3-204ENST00000553361 PPIP5K2O43314 1243 aa21.47■■□□□ 1.03
XRCC3-204ENST00000553361 BBOX1O75936 387 aa21.47■■□□□ 1.03
XRCC3-204ENST00000553361 HYPKQ9NX55 129 aa21.47■■□□□ 1.03
XRCC3-204ENST00000553361 ZNF853P0CG23 659 aa21.46■■□□□ 1.03
XRCC3-204ENST00000553361 NIM1KQ8IY84 436 aa21.46■■□□□ 1.03
XRCC3-204ENST00000553361 CREBZFQ9NS37 354 aa21.46■■□□□ 1.03
XRCC3-204ENST00000553361 IFT57Q9NWB7 429 aa21.46■■□□□ 1.03
XRCC3-204ENST00000553361 MKRN1Q9UHC7 482 aaKnown RBP21.46■■□□□ 1.03
XRCC3-204ENST00000553361 CALD1Q05682 793 aaKnown RBP21.45■■□□□ 1.02
XRCC3-204ENST00000553361 AOC3Q16853 763 aa21.45■■□□□ 1.02
XRCC3-204ENST00000553361 PNMA8AQ86V59 439 aaPredicted RBP21.45■■□□□ 1.02
XRCC3-204ENST00000553361 SP8Q8IXZ3 490 aa21.45■■□□□ 1.02
XRCC3-204ENST00000553361 FAM89AQ96GI7 184 aa21.45■■□□□ 1.02
XRCC3-204ENST00000553361 ISCA1Q9BUE6 129 aa21.45■■□□□ 1.02
XRCC3-204ENST00000553361 LMOD1P29536 600 aaPredicted RBP21.44■■□□□ 1.02
XRCC3-204ENST00000553361 GNAI1P63096 354 aa21.44■■□□□ 1.02
XRCC3-204ENST00000553361 RTL5Q5HYW3 569 aaPredicted RBP21.44■■□□□ 1.02
XRCC3-204ENST00000553361 DPP8Q6V1X1 898 aaPredicted RBP21.44■■□□□ 1.02
XRCC3-204ENST00000553361 MPNDQ8N594 471 aa21.44■■□□□ 1.02
XRCC3-204ENST00000553361 ITGBL1O95965 494 aaPredicted RBP21.43■■□□□ 1.02
XRCC3-204ENST00000553361 GRAPQ13588 217 aa21.43■■□□□ 1.02
XRCC3-204ENST00000553361 MAP1SQ66K74 1059 aaPredicted RBP21.43■■□□□ 1.02
XRCC3-204ENST00000553361 GRAPLQ8TC17 118 aaPredicted RBP21.43■■□□□ 1.02
XRCC3-204ENST00000553361 PASKQ96RG2 1323 aa21.43■■□□□ 1.02
XRCC3-204ENST00000553361 COL4A5P29400 1685 aa21.42■■□□□ 1.02
XRCC3-204ENST00000553361 RIC3Q7Z5B4 369 aa21.42■■□□□ 1.02
XRCC3-204ENST00000553361 CNTROBQ8N137 903 aa21.42■■□□□ 1.02
XRCC3-204ENST00000553361 SUPT20HQ8NEM7 779 aa21.42■■□□□ 1.02
XRCC3-204ENST00000553361 EPS15P42566 896 aa21.41■■□□□ 1.02
XRCC3-204ENST00000553361 CCDC184Q52MB2 194 aa21.41■■□□□ 1.02
XRCC3-204ENST00000553361 C8orf58Q8NAV2 365 aa21.41■■□□□ 1.02
XRCC3-204ENST00000553361 RTFDC1Q9BY42 306 aaPredicted RBP21.41■■□□□ 1.02
XRCC3-204ENST00000553361 VPS33BQ9H267 617 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms