RNA–Protein interactions for RNA: ENST00000552685.1

LINC00661-207, long intergenic non-protein coding RNA 661, humanhuman

TSL 4

Gene LINC00661, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-207ENST00000552685 NEUROD2Q15784 382 aa13.04□□□□□ -0.32
LINC00661-207ENST00000552685 CRY2Q49AN0 593 aa13.04□□□□□ -0.32
LINC00661-207ENST00000552685 EAPPQ56P03 285 aaPredicted RBP13.04□□□□□ -0.32
LINC00661-207ENST00000552685 ZNF34Q8IZ26 560 aa13.04□□□□□ -0.32
LINC00661-207ENST00000552685 RTKN2Q8IZC4 609 aa13.04□□□□□ -0.32
LINC00661-207ENST00000552685 RPGRQ92834 1020 aaKnown RBP13.04□□□□□ -0.32
LINC00661-207ENST00000552685 ZNF428Q96B54 188 aa13.04□□□□□ -0.32
LINC00661-207ENST00000552685 L3MBTL3Q96JM7 780 aaPredicted RBP13.04□□□□□ -0.32
LINC00661-207ENST00000552685 PNNQ9H307 717 aaKnown RBP13.04□□□□□ -0.32
LINC00661-207ENST00000552685 TAF1DQ9H5J8 278 aaPredicted RBP13.04□□□□□ -0.32
LINC00661-207ENST00000552685 CREBZFQ9NS37 354 aa13.04□□□□□ -0.32
LINC00661-207ENST00000552685 CNTNAP1P78357 1384 aa13.04□□□□□ -0.32
LINC00661-207ENST00000552685 ITGBL1O95965 494 aaPredicted RBP13.03□□□□□ -0.32
LINC00661-207ENST00000552685 TMPOP42166 694 aaKnown RBP13.03□□□□□ -0.32
LINC00661-207ENST00000552685 KRT24Q2M2I5 525 aa13.03□□□□□ -0.32
LINC00661-207ENST00000552685 GIGYF2Q6Y7W6 1299 aaKnown RBP13.03□□□□□ -0.32
LINC00661-207ENST00000552685 LRP10Q7Z4F1 713 aa13.03□□□□□ -0.32
LINC00661-207ENST00000552685 SCN4AP35499 1836 aa13.02□□□□□ -0.32
LINC00661-207ENST00000552685 IQCA1LA6NCM1 817 aa13.02□□□□□ -0.33
LINC00661-207ENST00000552685 AIMP1Q12904 312 aaKnown RBP13.02□□□□□ -0.33
LINC00661-207ENST00000552685 RALBP1Q15311 655 aa13.02□□□□□ -0.33
LINC00661-207ENST00000552685 RNF123Q5XPI4 1314 aa13.02□□□□□ -0.33
LINC00661-207ENST00000552685 FZD9O00144 591 aa13.01□□□□□ -0.33
LINC00661-207ENST00000552685 HOXA10P31260 410 aaPredicted RBP13.01□□□□□ -0.33
LINC00661-207ENST00000552685 LDHDQ86WU2 507 aa13.01□□□□□ -0.33
LINC00661-207ENST00000552685 RBM17Q96I25 401 aaKnown RBP13.01□□□□□ -0.33
LINC00661-207ENST00000552685 HACL1Q9UJ83 578 aa13.01□□□□□ -0.33
LINC00661-207ENST00000552685 CLEC11AQ9Y240 323 aa13.01□□□□□ -0.33
LINC00661-207ENST00000552685 LAS1LQ9Y4W2 734 aaKnown RBP13.01□□□□□ -0.33
LINC00661-207ENST00000552685 GJA3Q9Y6H8 435 aa13.01□□□□□ -0.33
LINC00661-207ENST00000552685 ERBB4Q15303 1308 aa13.01□□□□□ -0.33
LINC00661-207ENST00000552685 IBTKQ9P2D0 1353 aaPredicted RBP13□□□□□ -0.33
LINC00661-207ENST00000552685 PPEF1O14829 653 aaPredicted RBP13□□□□□ -0.33
LINC00661-207ENST00000552685 EPHX2P34913 555 aa13□□□□□ -0.33
LINC00661-207ENST00000552685 COPS6Q7L5N1 327 aa13□□□□□ -0.33
LINC00661-207ENST00000552685 XAGE3Q8WTP9 111 aa13□□□□□ -0.33
LINC00661-207ENST00000552685 PSMD1Q99460 953 aa13□□□□□ -0.33
LINC00661-207ENST00000552685 THSD7BQ9C0I4 1608 aa12.99□□□□□ -0.33
LINC00661-207ENST00000552685 RIC1Q4ADV7 1423 aa12.99□□□□□ -0.33
LINC00661-207ENST00000552685 MYBBP1AQ9BQG0 1328 aaKnown RBP12.99□□□□□ -0.33
LINC00661-207ENST00000552685 HCLS1P14317 486 aaPredicted RBP12.99□□□□□ -0.33
LINC00661-207ENST00000552685 VEGFBP49765 207 aa12.99□□□□□ -0.33
LINC00661-207ENST00000552685 MAP1SQ66K74 1059 aaPredicted RBP12.99□□□□□ -0.33
LINC00661-207ENST00000552685 PPP1R42Q7Z4L9 355 aa12.99□□□□□ -0.33
LINC00661-207ENST00000552685 JDP2Q8WYK2 163 aa12.99□□□□□ -0.33
LINC00661-207ENST00000552685 CRAMP1Q96RY5 1269 aa12.99□□□□□ -0.33
LINC00661-207ENST00000552685 UTP14AQ9BVJ6 771 aaKnown RBP12.99□□□□□ -0.33
LINC00661-207ENST00000552685 TRIM35Q9UPQ4 493 aa12.99□□□□□ -0.33
LINC00661-207ENST00000552685 FMR1Q06787 632 aaKnown RBP eCLIP12.98□□□□□ -0.33
LINC00661-207ENST00000552685 LMOD3Q0VAK6 560 aa12.98□□□□□ -0.33
LINC00661-207ENST00000552685 PARP10Q53GL7 1025 aa12.98□□□□□ -0.33
LINC00661-207ENST00000552685 LARGE2Q8N3Y3 721 aa12.98□□□□□ -0.33
LINC00661-207ENST00000552685 NLRP3Q96P20 1036 aa12.98□□□□□ -0.33
LINC00661-207ENST00000552685 LAMB2P55268 1798 aa12.97□□□□□ -0.33
LINC00661-207ENST00000552685 ANKRD36CQ5JPF3 1778 aa12.97□□□□□ -0.33
LINC00661-207ENST00000552685 ABCC4O15439 1325 aa12.97□□□□□ -0.33
LINC00661-207ENST00000552685 CHL1O00533 1208 aa12.97□□□□□ -0.33
LINC00661-207ENST00000552685 EIF6P56537 245 aaKnown RBP12.97□□□□□ -0.33
LINC00661-207ENST00000552685 CC2D2BQ6DHV5 1058 aa12.97□□□□□ -0.33
LINC00661-207ENST00000552685 NLRP10Q86W26 655 aa12.97□□□□□ -0.33
LINC00661-207ENST00000552685 GPC2Q8N158 579 aa12.97□□□□□ -0.33
LINC00661-207ENST00000552685 BABAM1Q9NWV8 329 aa12.97□□□□□ -0.33
LINC00661-207ENST00000552685 CHPF2Q9P2E5 772 aa12.97□□□□□ -0.33
LINC00661-207ENST00000552685 ADAMTS8Q9UP79 889 aa12.97□□□□□ -0.33
LINC00661-207ENST00000552685 TAF1P21675 1872 aa12.97□□□□□ -0.33
LINC00661-207ENST00000552685 PPIP5K2O43314 1243 aa12.96□□□□□ -0.33
LINC00661-207ENST00000552685 EPS15P42566 896 aa12.96□□□□□ -0.33
LINC00661-207ENST00000552685 WDR43Q15061 677 aaKnown RBP eCLIP12.96□□□□□ -0.33
LINC00661-207ENST00000552685 AOC3Q16853 763 aa12.96□□□□□ -0.33
LINC00661-207ENST00000552685 SLC10A5Q5PT55 438 aa12.96□□□□□ -0.33
LINC00661-207ENST00000552685 RUNDC1Q96C34 613 aa12.96□□□□□ -0.33
LINC00661-207ENST00000552685 WBP1LQ9NX94 342 aa12.96□□□□□ -0.33
LINC00661-207ENST00000552685 TMEM88BA6NKF7 163 aa12.95□□□□□ -0.34
LINC00661-207ENST00000552685 NIM1KQ8IY84 436 aa12.95□□□□□ -0.34
LINC00661-207ENST00000552685 CNTROBQ8N137 903 aa12.95□□□□□ -0.34
LINC00661-207ENST00000552685 DDX21Q9NR30 783 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC00661-207ENST00000552685 TRMT112Q9UI30 125 aaKnown RBP12.95□□□□□ -0.34
LINC00661-207ENST00000552685 ATP6V0A2Q9Y487 856 aa12.95□□□□□ -0.34
LINC00661-207ENST00000552685 LMOD1P29536 600 aaPredicted RBP12.94□□□□□ -0.34
LINC00661-207ENST00000552685 SCNN1DP51172 638 aa12.94□□□□□ -0.34
LINC00661-207ENST00000552685 TCIRG1Q13488 830 aa12.94□□□□□ -0.34
LINC00661-207ENST00000552685 HDGFL1Q5TGJ6 251 aa12.94□□□□□ -0.34
LINC00661-207ENST00000552685 PNMA8AQ86V59 439 aaPredicted RBP12.94□□□□□ -0.34
LINC00661-207ENST00000552685 PRDM10Q9NQV6 1147 aa12.94□□□□□ -0.34
LINC00661-207ENST00000552685 RASSF10A6NK89 507 aa12.93□□□□□ -0.34
LINC00661-207ENST00000552685 ATP5J2-PTCD1G3V325 749 aa12.93□□□□□ -0.34
LINC00661-207ENST00000552685 HSPA8P11142 646 aaKnown RBP12.93□□□□□ -0.34
LINC00661-207ENST00000552685 HSP90AB3PQ58FF7 597 aa12.93□□□□□ -0.34
LINC00661-207ENST00000552685 SH3TC1Q8TE82 1336 aa12.92□□□□□ -0.34
LINC00661-207ENST00000552685 LBX1P52954 281 aa12.92□□□□□ -0.34
LINC00661-207ENST00000552685 GRIPAP1Q4V328 841 aa12.92□□□□□ -0.34
LINC00661-207ENST00000552685 RTL5Q5HYW3 569 aaPredicted RBP12.92□□□□□ -0.34
LINC00661-207ENST00000552685 DPP8Q6V1X1 898 aaPredicted RBP12.92□□□□□ -0.34
LINC00661-207ENST00000552685 TMX4Q9H1E5 349 aaPredicted RBP12.92□□□□□ -0.34
LINC00661-207ENST00000552685 COL4A1P02462 1669 aa12.92□□□□□ -0.34
LINC00661-207ENST00000552685 DDX60Q8IY21 1712 aaKnown RBP12.91□□□□□ -0.34
LINC00661-207ENST00000552685 TRAF5O00463 557 aa12.91□□□□□ -0.34
LINC00661-207ENST00000552685 BBOX1O75936 387 aa12.91□□□□□ -0.34
LINC00661-207ENST00000552685 CXCL9Q07325 125 aa12.91□□□□□ -0.34
LINC00661-207ENST00000552685 GRAPQ13588 217 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms