RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 TMEM214Q6NUQ4 689 aaKnown RBP6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 TREML4Q6UXN2 200 aa6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 DPH6Q7L8W6 267 aa6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 ARMC5Q96C12 935 aa6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 OSBPL7Q9BZF2 842 aa6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 ZNF395Q9H8N7 513 aaPredicted RBP6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 CAPN10Q9HC96 672 aa6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 ZDHHC3Q9NYG2 299 aa6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 SPG7Q9UQ90 795 aa6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 GPC6Q9Y625 555 aaPredicted RBP6.22□□□□□ -1.41
LSM6P2-201ENST00000552208 USP31Q70CQ4 1352 aa6.21□□□□□ -1.41
LSM6P2-201ENST00000552208 GIPC1O14908 333 aa6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 TNFRSF21O75509 655 aa6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 EIF4BP23588 611 aaKnown RBP6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 INPP5BP32019 993 aa6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 RNF144AP50876 292 aaPredicted RBP6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 RELBQ01201 579 aa6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 C8orf34Q49A92 452 aa6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 USPL1Q5W0Q7 1092 aa6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 SNIP1Q8TAD8 396 aaKnown RBP6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 SUSD3Q96L08 255 aa6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 CUEDC1Q9NWM3 386 aaPredicted RBP6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 STK17AQ9UEE5 414 aa6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 WASF2Q9Y6W5 498 aa6.21□□□□□ -1.42
LSM6P2-201ENST00000552208 SPATA31C2B4DYI2 1134 aa6.2□□□□□ -1.42
LSM6P2-201ENST00000552208 WDR4P57081 412 aaKnown RBP6.2□□□□□ -1.42
LSM6P2-201ENST00000552208 RBL2Q08999 1139 aa6.2□□□□□ -1.42
LSM6P2-201ENST00000552208 HIF1AQ16665 826 aa6.2□□□□□ -1.42
LSM6P2-201ENST00000552208 ZNF394Q53GI3 561 aa6.2□□□□□ -1.42
LSM6P2-201ENST00000552208 GIMAP6Q6P9H5 292 aa6.2□□□□□ -1.42
LSM6P2-201ENST00000552208 MEIOBQ8N635 442 aa6.2□□□□□ -1.42
LSM6P2-201ENST00000552208 ZNF280CQ8ND82 737 aa6.2□□□□□ -1.42
LSM6P2-201ENST00000552208 CCDC74AQ96AQ1 378 aa6.2□□□□□ -1.42
LSM6P2-201ENST00000552208 C12orf49Q9H741 205 aa6.2□□□□□ -1.42
LSM6P2-201ENST00000552208 ZFYVE28Q9HCC9 887 aa6.2□□□□□ -1.42
LSM6P2-201ENST00000552208 POTECB2RU33 542 aa6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 ATP2B1P20020 1258 aa6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 PLA2G4AP47712 749 aa6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 TRIP4Q15650 581 aaPredicted RBP6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 GNASQ5JWF2 1037 aa6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 ZNF697Q5TEC3 545 aa6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 PDE12Q6L8Q7 609 aaKnown RBP6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 PI16Q6UXB8 463 aa6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 ZNF654Q8IZM8 581 aa6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 RHPN1Q8TCX5 695 aa6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 EPS8L3Q8TE67 593 aaKnown RBP6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 DHX38Q92620 1227 aaKnown RBP6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 LNPKQ9C0E8 428 aa6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 FOXD3Q9UJU5 478 aaPredicted RBP6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 KCNMB2Q9Y691 235 aa6.19□□□□□ -1.42
LSM6P2-201ENST00000552208 J3QL48 77 aa6.18□□□□□ -1.42
LSM6P2-201ENST00000552208 GRNP28799 593 aaKnown RBP6.18□□□□□ -1.42
LSM6P2-201ENST00000552208 GTF2E1P29083 439 aaPredicted RBP6.18□□□□□ -1.42
LSM6P2-201ENST00000552208 IRS1P35568 1242 aa6.18□□□□□ -1.42
LSM6P2-201ENST00000552208 IDH3AP50213 366 aa6.18□□□□□ -1.42
LSM6P2-201ENST00000552208 USP48Q86UV5 1035 aa6.18□□□□□ -1.42
LSM6P2-201ENST00000552208 TTC16Q8NEE8 873 aa6.18□□□□□ -1.42
LSM6P2-201ENST00000552208 DNAJC2Q99543 621 aaKnown RBP6.18□□□□□ -1.42
LSM6P2-201ENST00000552208 RTCBQ9Y3I0 505 aaKnown RBP6.18□□□□□ -1.42
LSM6P2-201ENST00000552208 PCDHGB7Q9Y5F8 929 aa6.18□□□□□ -1.42
LSM6P2-201ENST00000552208 SPINT1O43278 529 aa6.17□□□□□ -1.42
LSM6P2-201ENST00000552208 ATP4AP20648 1035 aa6.17□□□□□ -1.42
LSM6P2-201ENST00000552208 ST13P50502 369 aaKnown RBP6.17□□□□□ -1.42
LSM6P2-201ENST00000552208 ARSDP51689 593 aa6.17□□□□□ -1.42
LSM6P2-201ENST00000552208 GNL2Q13823 731 aaKnown RBP6.17□□□□□ -1.42
LSM6P2-201ENST00000552208 TAF1CQ15572 869 aaPredicted RBP6.17□□□□□ -1.42
LSM6P2-201ENST00000552208 NBPF1Q3BBV0 1214 aa6.17□□□□□ -1.42
LSM6P2-201ENST00000552208 MEI1Q5TIA1 1274 aa6.17□□□□□ -1.42
LSM6P2-201ENST00000552208 HS2ST1Q7LGA3 356 aa6.17□□□□□ -1.42
LSM6P2-201ENST00000552208 SNX29Q8TEQ0 813 aa6.17□□□□□ -1.42
LSM6P2-201ENST00000552208 HSH2DQ96JZ2 352 aa6.17□□□□□ -1.42
LSM6P2-201ENST00000552208 USP20Q9Y2K6 914 aa6.17□□□□□ -1.42
LSM6P2-201ENST00000552208 GDF9O60383 454 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 SMPD1P17405 629 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 GJA8P48165 433 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 PRR20EP86478 221 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 PRR20CP86479 221 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 PRR20DP86480 221 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 PRR20BP86481 221 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 PRR20AP86496 221 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 ARID5AQ03989 594 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 FOXC1Q12948 553 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 WDR44Q5JSH3 913 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 SLC27A3Q5K4L6 730 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 ERMP1Q7Z2K6 904 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 BTLAQ7Z6A9 289 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 NOP9Q86U38 636 aaKnown RBP6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 ZIC5Q96T25 663 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 INSM2Q96T92 566 aaPredicted RBP6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 SRCIN1Q9C0H9 1055 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 CHRDQ9H2X0 955 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 ELP3Q9H9T3 547 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 TOR4AQ9NXH8 423 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 ANKIB1Q9P2G1 1089 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 FAM8A1Q9UBU6 413 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 GGT7Q9UJ14 662 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 INPP5FQ9Y2H2 1132 aa6.16□□□□□ -1.42
LSM6P2-201ENST00000552208 DNAJA1P31689 397 aaKnown RBP6.15□□□□□ -1.42
LSM6P2-201ENST00000552208 MCF2L2Q86YR7 1114 aa6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms