RNA–Protein interactions for RNA: ENST00000552020.1

PPFIA2-226, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 3

Gene PPFIA2, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-226ENST00000552020 A6NHS1 94 aa8.43□□□□□ -1.06
PPFIA2-226ENST00000552020 RNF223E7ERA6 249 aa8.43□□□□□ -1.06
PPFIA2-226ENST00000552020 NEFLP07196 543 aa8.43□□□□□ -1.06
PPFIA2-226ENST00000552020 TEAD4Q15561 434 aa8.43□□□□□ -1.06
PPFIA2-226ENST00000552020 CCDC144BQ3MJ40 725 aa8.43□□□□□ -1.06
PPFIA2-226ENST00000552020 ZDHHC1Q8WTX9 485 aa8.43□□□□□ -1.06
PPFIA2-226ENST00000552020 L3MBTL2Q969R5 705 aa8.43□□□□□ -1.06
PPFIA2-226ENST00000552020 ESYT1Q9BSJ8 1104 aa8.43□□□□□ -1.06
PPFIA2-226ENST00000552020 OPLAHO14841 1288 aa8.42□□□□□ -1.06
PPFIA2-226ENST00000552020 CTSHP09668 335 aa8.42□□□□□ -1.06
PPFIA2-226ENST00000552020 HS2ST1Q7LGA3 356 aa8.42□□□□□ -1.06
PPFIA2-226ENST00000552020 TREML1Q86YW5 311 aa8.42□□□□□ -1.06
PPFIA2-226ENST00000552020 HIRIP3Q9BW71 556 aaPredicted RBP8.42□□□□□ -1.06
PPFIA2-226ENST00000552020 MEN1O00255 615 aa8.41□□□□□ -1.06
PPFIA2-226ENST00000552020 CPNE3O75131 537 aaKnown RBP8.41□□□□□ -1.06
PPFIA2-226ENST00000552020 SLC19A1P41440 591 aa8.41□□□□□ -1.06
PPFIA2-226ENST00000552020 HIRAP54198 1017 aaPredicted RBP8.41□□□□□ -1.06
PPFIA2-226ENST00000552020 NR5A1Q13285 461 aa8.41□□□□□ -1.06
PPFIA2-226ENST00000552020 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.41□□□□□ -1.06
PPFIA2-226ENST00000552020 VPS37DQ86XT2 251 aa8.41□□□□□ -1.06
PPFIA2-226ENST00000552020 ANKRD13AQ8IZ07 590 aa8.41□□□□□ -1.06
PPFIA2-226ENST00000552020 ANKLE1Q8NAG6 615 aa8.41□□□□□ -1.06
PPFIA2-226ENST00000552020 ARMC5Q96C12 935 aa8.41□□□□□ -1.06
PPFIA2-226ENST00000552020 GGT7Q9UJ14 662 aa8.41□□□□□ -1.06
PPFIA2-226ENST00000552020 DDX41Q9UJV9 622 aaKnown RBP8.41□□□□□ -1.06
PPFIA2-226ENST00000552020 ADH1AP07327 375 aa8.4□□□□□ -1.06
PPFIA2-226ENST00000552020 NR3C2P08235 984 aa8.4□□□□□ -1.06
PPFIA2-226ENST00000552020 GTF2E1P29083 439 aaPredicted RBP8.4□□□□□ -1.06
PPFIA2-226ENST00000552020 FBXO41Q8TF61 875 aa8.4□□□□□ -1.06
PPFIA2-226ENST00000552020 NLRP3Q96P20 1036 aa8.4□□□□□ -1.06
PPFIA2-226ENST00000552020 GGNBP2Q9H3C7 697 aa8.4□□□□□ -1.06
PPFIA2-226ENST00000552020 ZSWIM4Q9H7M6 989 aa8.4□□□□□ -1.06
PPFIA2-226ENST00000552020 FAM13BQ9NYF5 915 aa8.4□□□□□ -1.06
PPFIA2-226ENST00000552020 CLASP1Q7Z460 1538 aa8.39□□□□□ -1.07
PPFIA2-226ENST00000552020 GAPVD1Q14C86 1478 aa8.39□□□□□ -1.07
PPFIA2-226ENST00000552020 KIF13AQ9H1H9 1805 aa8.39□□□□□ -1.07
PPFIA2-226ENST00000552020 STK10O94804 968 aaKnown RBP8.39□□□□□ -1.07
PPFIA2-226ENST00000552020 CD2BP2O95400 341 aaKnown RBP8.39□□□□□ -1.07
PPFIA2-226ENST00000552020 RPIAP49247 311 aa8.39□□□□□ -1.07
PPFIA2-226ENST00000552020 RACK1P63244 317 aaKnown RBP8.39□□□□□ -1.07
PPFIA2-226ENST00000552020 POTEAQ6S8J7 498 aa8.39□□□□□ -1.07
PPFIA2-226ENST00000552020 GMLQ99445 158 aa8.39□□□□□ -1.07
PPFIA2-226ENST00000552020 DNAJC25Q9H1X3 360 aa8.39□□□□□ -1.07
PPFIA2-226ENST00000552020 WIZO95785 1651 aa8.39□□□□□ -1.07
PPFIA2-226ENST00000552020 LMTK3Q96Q04 1460 aa8.38□□□□□ -1.07
PPFIA2-226ENST00000552020 CENPCQ03188 943 aa8.38□□□□□ -1.07
PPFIA2-226ENST00000552020 CLN3Q13286 438 aa8.38□□□□□ -1.07
PPFIA2-226ENST00000552020 TMEM214Q6NUQ4 689 aaKnown RBP8.38□□□□□ -1.07
PPFIA2-226ENST00000552020 PI16Q6UXB8 463 aa8.38□□□□□ -1.07
PPFIA2-226ENST00000552020 ZSCAN10Q96SZ4 725 aaPredicted RBP8.38□□□□□ -1.07
PPFIA2-226ENST00000552020 NIFKQ9BYG3 293 aaKnown RBP8.38□□□□□ -1.07
PPFIA2-226ENST00000552020 C12orf49Q9H741 205 aa8.38□□□□□ -1.07
PPFIA2-226ENST00000552020 ERCC6L2Q5T890 1561 aa8.37□□□□□ -1.07
PPFIA2-226ENST00000552020 RPLP1P05386 114 aaKnown RBP8.37□□□□□ -1.07
PPFIA2-226ENST00000552020 PKDCCQ504Y2 493 aa8.37□□□□□ -1.07
PPFIA2-226ENST00000552020 FHDC1Q9C0D6 1143 aaPredicted RBP8.37□□□□□ -1.07
PPFIA2-226ENST00000552020 HRH3Q9Y5N1 445 aa8.37□□□□□ -1.07
PPFIA2-226ENST00000552020 TOPBP1Q92547 1522 aa8.37□□□□□ -1.07
PPFIA2-226ENST00000552020 SYNJ1O43426 1573 aa8.36□□□□□ -1.07
PPFIA2-226ENST00000552020 CBLBQ13191 982 aa8.36□□□□□ -1.07
PPFIA2-226ENST00000552020 MEI1Q5TIA1 1274 aa8.36□□□□□ -1.07
PPFIA2-226ENST00000552020 USPL1Q5W0Q7 1092 aa8.36□□□□□ -1.07
PPFIA2-226ENST00000552020 ZNF662Q6ZS27 426 aa8.36□□□□□ -1.07
PPFIA2-226ENST00000552020 MPNDQ8N594 471 aa8.36□□□□□ -1.07
PPFIA2-226ENST00000552020 RHPN1Q8TCX5 695 aa8.36□□□□□ -1.07
PPFIA2-226ENST00000552020 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.36□□□□□ -1.07
PPFIA2-226ENST00000552020 PIF1Q9H611 641 aa8.36□□□□□ -1.07
PPFIA2-226ENST00000552020 FOXD3Q9UJU5 478 aaPredicted RBP8.36□□□□□ -1.07
PPFIA2-226ENST00000552020 TLDC2A0PJX2 215 aa8.35□□□□□ -1.07
PPFIA2-226ENST00000552020 MICAL2O94851 1124 aa8.35□□□□□ -1.07
PPFIA2-226ENST00000552020 IRS1P35568 1242 aa8.35□□□□□ -1.07
PPFIA2-226ENST00000552020 TXLNAP40222 546 aa8.35□□□□□ -1.07
PPFIA2-226ENST00000552020 PLA2G4AP47712 749 aa8.35□□□□□ -1.07
PPFIA2-226ENST00000552020 BMS1Q14692 1282 aaKnown RBP8.35□□□□□ -1.07
PPFIA2-226ENST00000552020 SOGA3Q5TF21 947 aa8.35□□□□□ -1.07
PPFIA2-226ENST00000552020 SPRYD7Q5W111 196 aa8.35□□□□□ -1.07
PPFIA2-226ENST00000552020 ZNF598Q86UK7 904 aaKnown RBP8.35□□□□□ -1.07
PPFIA2-226ENST00000552020 EPS8L3Q8TE67 593 aaKnown RBP8.35□□□□□ -1.07
PPFIA2-226ENST00000552020 CCDC74AQ96AQ1 378 aa8.35□□□□□ -1.07
PPFIA2-226ENST00000552020 AGBL1Q96MI9 1066 aa8.35□□□□□ -1.07
PPFIA2-226ENST00000552020 HECW2Q9P2P5 1572 aa8.35□□□□□ -1.07
PPFIA2-226ENST00000552020 PRDM2Q13029 1718 aa8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 SIAH2O43255 324 aa8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 USP17L7P0C7H9 530 aa8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 PTGIRP43119 386 aa8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 RELBQ01201 579 aa8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 PTPN12Q05209 780 aaKnown RBP8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 TAF1CQ15572 869 aaPredicted RBP8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 C1orf53Q5VUE5 145 aa8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 SDE2Q6IQ49 451 aa8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 PPARGC1BQ86YN6 1023 aaKnown RBP8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 MCF2L2Q86YR7 1114 aa8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 OSBPL7Q9BZF2 842 aa8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 OSBPL2Q9H1P3 480 aa8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 SRA1Q9HD15 236 aaKnown RBP8.34□□□□□ -1.07
PPFIA2-226ENST00000552020 TARBP1Q13395 1621 aaKnown RBP8.33□□□□□ -1.08
PPFIA2-226ENST00000552020 GIPC1O14908 333 aa8.33□□□□□ -1.08
PPFIA2-226ENST00000552020 PAK2Q13177 524 aa8.33□□□□□ -1.08
PPFIA2-226ENST00000552020 HIF1AQ16665 826 aa8.33□□□□□ -1.08
PPFIA2-226ENST00000552020 GNASQ5JWF2 1037 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms