RNA–Protein interactions for RNA: ENST00000551557.1

TGIF1-220, Transcript of TGFB induced factor homeobox 1, humanhuman

TSL 3

Gene TGIF1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGIF1-220ENST00000551557 HSP90AB3PQ58FF7 597 aa25.67■■□□□ 1.7
TGIF1-220ENST00000551557 DDX60Q8IY21 1712 aaKnown RBP25.66■■□□□ 1.7
TGIF1-220ENST00000551557 LMNB1P20700 586 aa25.66■■□□□ 1.7
TGIF1-220ENST00000551557 C1QTNF8P60827 252 aa25.66■■□□□ 1.7
TGIF1-220ENST00000551557 CRY2Q49AN0 593 aa25.66■■□□□ 1.7
TGIF1-220ENST00000551557 ANKRD13DQ6ZTN6 518 aa25.66■■□□□ 1.7
TGIF1-220ENST00000551557 NLRP10Q86W26 655 aa25.66■■□□□ 1.7
TGIF1-220ENST00000551557 PLBD2Q8NHP8 589 aa25.66■■□□□ 1.7
TGIF1-220ENST00000551557 UTP14AQ9BVJ6 771 aaKnown RBP25.66■■□□□ 1.7
TGIF1-220ENST00000551557 IL16Q14005 1332 aa25.65■■□□□ 1.7
TGIF1-220ENST00000551557 C3orf67Q6ZVT6 689 aa25.65■■□□□ 1.7
TGIF1-220ENST00000551557 C7orf43Q8WVR3 580 aa25.65■■□□□ 1.7
TGIF1-220ENST00000551557 ZNF428Q96B54 188 aa25.65■■□□□ 1.7
TGIF1-220ENST00000551557 PHAXQ9H814 394 aaKnown RBP25.65■■□□□ 1.7
TGIF1-220ENST00000551557 TAF1P21675 1872 aa25.64■■□□□ 1.7
TGIF1-220ENST00000551557 OLFM4Q6UX06 510 aa25.64■■□□□ 1.7
TGIF1-220ENST00000551557 CACNA1FO60840 1977 aa25.64■■□□□ 1.69
TGIF1-220ENST00000551557 SYNE4Q8N205 404 aa25.63■■□□□ 1.69
TGIF1-220ENST00000551557 KIF3CO14782 793 aa25.61■■□□□ 1.69
TGIF1-220ENST00000551557 ALDH1B1P30837 517 aa25.61■■□□□ 1.69
TGIF1-220ENST00000551557 CCDC30Q5VVM6 783 aa25.61■■□□□ 1.69
TGIF1-220ENST00000551557 RPGRQ92834 1020 aaKnown RBP25.61■■□□□ 1.69
TGIF1-220ENST00000551557 TAOK3Q9H2K8 898 aa25.61■■□□□ 1.69
TGIF1-220ENST00000551557 NMRK2Q9NPI5 230 aa25.61■■□□□ 1.69
TGIF1-220ENST00000551557 LTBP3Q9NS15 1303 aa25.61■■□□□ 1.69
TGIF1-220ENST00000551557 FANCIQ9NVI1 1328 aa25.61■■□□□ 1.69
TGIF1-220ENST00000551557 ATP5J2-PTCD1G3V325 749 aa25.6■■□□□ 1.69
TGIF1-220ENST00000551557 SLC10A5Q5PT55 438 aa25.6■■□□□ 1.69
TGIF1-220ENST00000551557 SOGA3Q5TF21 947 aa25.6■■□□□ 1.69
TGIF1-220ENST00000551557 WDR63Q8IWG1 891 aa25.6■■□□□ 1.69
TGIF1-220ENST00000551557 ISCA1Q9BUE6 129 aa25.6■■□□□ 1.69
TGIF1-220ENST00000551557 TRMT112Q9UI30 125 aaKnown RBP25.6■■□□□ 1.69
TGIF1-220ENST00000551557 RNF123Q5XPI4 1314 aa25.6■■□□□ 1.69
TGIF1-220ENST00000551557 TCERG1O14776 1098 aaKnown RBP25.59■■□□□ 1.69
TGIF1-220ENST00000551557 HOXA10P31260 410 aaPredicted RBP25.59■■□□□ 1.69
TGIF1-220ENST00000551557 TWISTNBQ3B726 338 aaPredicted RBP25.59■■□□□ 1.69
TGIF1-220ENST00000551557 CCDC93Q567U6 631 aa25.59■■□□□ 1.69
TGIF1-220ENST00000551557 HCLS1P14317 486 aaPredicted RBP25.58■■□□□ 1.69
TGIF1-220ENST00000551557 GOLGA2Q08379 1002 aa25.58■■□□□ 1.69
TGIF1-220ENST00000551557 NLRP3Q96P20 1036 aa25.58■■□□□ 1.69
TGIF1-220ENST00000551557 SPINK5Q9NQ38 1064 aaPredicted RBP25.58■■□□□ 1.69
TGIF1-220ENST00000551557 ZC3H4Q9UPT8 1303 aaKnown RBP25.58■■□□□ 1.69
TGIF1-220ENST00000551557 RIC3Q7Z5B4 369 aa25.57■■□□□ 1.68
TGIF1-220ENST00000551557 SLC51AQ86UW1 340 aa25.57■■□□□ 1.68
TGIF1-220ENST00000551557 SH3TC1Q8TE82 1336 aa25.57■■□□□ 1.68
TGIF1-220ENST00000551557 SNED1Q8TER0 1413 aa25.56■■□□□ 1.68
TGIF1-220ENST00000551557 RBM17Q96I25 401 aaKnown RBP25.56■■□□□ 1.68
TGIF1-220ENST00000551557 CRAMP1Q96RY5 1269 aa25.55■■□□□ 1.68
TGIF1-220ENST00000551557 CHMP4AQ9BY43 222 aa25.55■■□□□ 1.68
TGIF1-220ENST00000551557 KDM2BQ8NHM5 1336 aa25.55■■□□□ 1.68
TGIF1-220ENST00000551557 FKBP4Q02790 459 aaKnown RBP eCLIP25.53■■□□□ 1.68
TGIF1-220ENST00000551557 FAM89AQ96GI7 184 aa25.53■■□□□ 1.68
TGIF1-220ENST00000551557 MYD88Q99836 296 aa25.53■■□□□ 1.68
TGIF1-220ENST00000551557 EXOSC9Q06265 439 aaKnown RBP25.52■■□□□ 1.68
TGIF1-220ENST00000551557 TRIM28Q13263 835 aaKnown RBP25.52■■□□□ 1.68
TGIF1-220ENST00000551557 RTL5Q5HYW3 569 aaPredicted RBP25.52■■□□□ 1.68
TGIF1-220ENST00000551557 G2E3Q7L622 706 aa25.52■■□□□ 1.68
TGIF1-220ENST00000551557 RTKN2Q8IZC4 609 aa25.52■■□□□ 1.68
TGIF1-220ENST00000551557 STK31Q9BXU1 1019 aa25.52■■□□□ 1.68
TGIF1-220ENST00000551557 RRAGCQ9HB90 399 aa25.52■■□□□ 1.68
TGIF1-220ENST00000551557 ZNF277Q9NRM2 450 aaPredicted RBP25.52■■□□□ 1.68
TGIF1-220ENST00000551557 ABCC4O15439 1325 aa25.52■■□□□ 1.68
TGIF1-220ENST00000551557 CEP350Q5VT06 3117 aa25.51■■□□□ 1.67
TGIF1-220ENST00000551557 GLTPD2A6NH11 291 aa25.51■■□□□ 1.67
TGIF1-220ENST00000551557 PPEF1O14829 653 aaPredicted RBP25.51■■□□□ 1.67
TGIF1-220ENST00000551557 WDR90Q96KV7 1748 aa25.51■■□□□ 1.67
TGIF1-220ENST00000551557 DDX58O95786 925 aaKnown RBP25.5■■□□□ 1.67
TGIF1-220ENST00000551557 MAP3K2Q9Y2U5 619 aa25.5■■□□□ 1.67
TGIF1-220ENST00000551557 COL4A1P02462 1669 aa25.49■■□□□ 1.67
TGIF1-220ENST00000551557 ZNF521Q96K83 1311 aa25.49■■□□□ 1.67
TGIF1-220ENST00000551557 VAMP4O75379 141 aa25.49■■□□□ 1.67
TGIF1-220ENST00000551557 SLC4A2P04920 1241 aa25.49■■□□□ 1.67
TGIF1-220ENST00000551557 METTL22Q9BUU2 404 aaPredicted RBP25.49■■□□□ 1.67
TGIF1-220ENST00000551557 MYH3P11055 1940 aa25.48■■□□□ 1.67
TGIF1-220ENST00000551557 PI4KAP2A4QPH2 592 aa25.48■■□□□ 1.67
TGIF1-220ENST00000551557 PI4KAP1Q8N8J0 262 aa25.48■■□□□ 1.67
TGIF1-220ENST00000551557 CC2D2BQ6DHV5 1058 aa25.47■■□□□ 1.67
TGIF1-220ENST00000551557 KSR2Q6VAB6 950 aa25.47■■□□□ 1.67
TGIF1-220ENST00000551557 LRRC37AA6NMS7 1700 aa25.46■■□□□ 1.67
TGIF1-220ENST00000551557 COL4A5P29400 1685 aa25.46■■□□□ 1.67
TGIF1-220ENST00000551557 PSMD1Q99460 953 aa25.46■■□□□ 1.67
TGIF1-220ENST00000551557 MYH16Q9H6N6 1097 aa25.46■■□□□ 1.67
TGIF1-220ENST00000551557 IRS4O14654 1257 aaPredicted RBP25.45■■□□□ 1.66
TGIF1-220ENST00000551557 TOMM70O94826 608 aa25.45■■□□□ 1.66
TGIF1-220ENST00000551557 IARSP41252 1262 aaKnown RBP25.45■■□□□ 1.66
TGIF1-220ENST00000551557 DDX46Q7L014 1031 aaKnown RBP25.45■■□□□ 1.66
TGIF1-220ENST00000551557 ZBTB38Q8NAP3 1195 aaPredicted RBP25.45■■□□□ 1.66
TGIF1-220ENST00000551557 CCDC191Q8NCU4 936 aa25.45■■□□□ 1.66
TGIF1-220ENST00000551557 JARID2Q92833 1246 aaPredicted RBP25.45■■□□□ 1.66
TGIF1-220ENST00000551557 ATP6V0A2Q9Y487 856 aa25.45■■□□□ 1.66
TGIF1-220ENST00000551557 DPY19L2Q6NUT2 758 aa25.44■■□□□ 1.66
TGIF1-220ENST00000551557 CWC25Q9NXE8 425 aaPredicted RBP25.44■■□□□ 1.66
TGIF1-220ENST00000551557 CCER2I3L3R5 266 aa25.43■■□□□ 1.66
TGIF1-220ENST00000551557 IGKV5-2P06315 115 aa25.43■■□□□ 1.66
TGIF1-220ENST00000551557 FLIIQ13045 1269 aa25.43■■□□□ 1.66
TGIF1-220ENST00000551557 GRAPQ13588 217 aa25.43■■□□□ 1.66
TGIF1-220ENST00000551557 SF3B3Q15393 1217 aaKnown RBP25.43■■□□□ 1.66
TGIF1-220ENST00000551557 GRAPLQ8TC17 118 aaPredicted RBP25.43■■□□□ 1.66
TGIF1-220ENST00000551557 POTECB2RU33 542 aa25.42■■□□□ 1.66
TGIF1-220ENST00000551557 BBOX1O75936 387 aa25.42■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 91.7 ms