RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 NTSR2O95665 410 aa23.61■■□□□ 1.37
PRPF40B-215ENST00000551418 ITGBL1O95965 494 aaPredicted RBP23.61■■□□□ 1.37
PRPF40B-215ENST00000551418 EIF2S2P20042 333 aaKnown RBP23.61■■□□□ 1.37
PRPF40B-215ENST00000551418 HOXA10P31260 410 aaPredicted RBP23.61■■□□□ 1.37
PRPF40B-215ENST00000551418 TSPYL4Q9UJ04 414 aa23.61■■□□□ 1.37
PRPF40B-215ENST00000551418 RNF123Q5XPI4 1314 aa23.6■■□□□ 1.37
PRPF40B-215ENST00000551418 RIPK4P57078 832 aa23.6■■□□□ 1.37
PRPF40B-215ENST00000551418 GIGYF2Q6Y7W6 1299 aaKnown RBP23.6■■□□□ 1.37
PRPF40B-215ENST00000551418 CAPN15O75808 1086 aa23.59■■□□□ 1.37
PRPF40B-215ENST00000551418 EPHX2P34913 555 aa23.59■■□□□ 1.37
PRPF40B-215ENST00000551418 RPGRQ92834 1020 aaKnown RBP23.59■■□□□ 1.37
PRPF40B-215ENST00000551418 PSMD1Q99460 953 aa23.59■■□□□ 1.37
PRPF40B-215ENST00000551418 HACL1Q9UJ83 578 aa23.59■■□□□ 1.37
PRPF40B-215ENST00000551418 ADAMTSL1Q8N6G6 1762 aa23.58■■□□□ 1.37
PRPF40B-215ENST00000551418 TNS4Q8IZW8 715 aa23.58■■□□□ 1.37
PRPF40B-215ENST00000551418 NECTIN2Q92692 538 aa23.58■■□□□ 1.37
PRPF40B-215ENST00000551418 CLEC11AQ9Y240 323 aa23.58■■□□□ 1.37
PRPF40B-215ENST00000551418 PNNQ9H307 717 aaKnown RBP23.57■■□□□ 1.36
PRPF40B-215ENST00000551418 IBTKQ9P2D0 1353 aaPredicted RBP23.56■■□□□ 1.36
PRPF40B-215ENST00000551418 TMPOP42166 694 aaKnown RBP23.56■■□□□ 1.36
PRPF40B-215ENST00000551418 CRAMP1Q96RY5 1269 aa23.56■■□□□ 1.36
PRPF40B-215ENST00000551418 ERBB4Q15303 1308 aa23.56■■□□□ 1.36
PRPF40B-215ENST00000551418 LTBP1Q14766 1721 aa23.56■■□□□ 1.36
PRPF40B-215ENST00000551418 KRT24Q2M2I5 525 aa23.55■■□□□ 1.36
PRPF40B-215ENST00000551418 MAP1SQ66K74 1059 aaPredicted RBP23.55■■□□□ 1.36
PRPF40B-215ENST00000551418 RBM17Q96I25 401 aaKnown RBP23.55■■□□□ 1.36
PRPF40B-215ENST00000551418 GJA3Q9Y6H8 435 aa23.55■■□□□ 1.36
PRPF40B-215ENST00000551418 RIC1Q4ADV7 1423 aa23.55■■□□□ 1.36
PRPF40B-215ENST00000551418 CCDC146Q8IYE0 955 aa23.54■■□□□ 1.36
PRPF40B-215ENST00000551418 GPC2Q8N158 579 aa23.54■■□□□ 1.36
PRPF40B-215ENST00000551418 JDP2Q8WYK2 163 aa23.54■■□□□ 1.36
PRPF40B-215ENST00000551418 ZNF428Q96B54 188 aa23.54■■□□□ 1.36
PRPF40B-215ENST00000551418 CNTNAP1P78357 1384 aa23.53■■□□□ 1.36
PRPF40B-215ENST00000551418 PPEF1O14829 653 aaPredicted RBP23.53■■□□□ 1.36
PRPF40B-215ENST00000551418 AIMP1Q12904 312 aaKnown RBP23.53■■□□□ 1.36
PRPF40B-215ENST00000551418 NEUROD2Q15784 382 aa23.53■■□□□ 1.36
PRPF40B-215ENST00000551418 CC2D2BQ6DHV5 1058 aa23.53■■□□□ 1.36
PRPF40B-215ENST00000551418 PPP1R42Q7Z4L9 355 aa23.53■■□□□ 1.36
PRPF40B-215ENST00000551418 FMR1Q06787 632 aaKnown RBP eCLIP23.52■■□□□ 1.36
PRPF40B-215ENST00000551418 SLC10A5Q5PT55 438 aa23.52■■□□□ 1.36
PRPF40B-215ENST00000551418 COPS6Q7L5N1 327 aa23.52■■□□□ 1.36
PRPF40B-215ENST00000551418 CNTROBQ8N137 903 aa23.52■■□□□ 1.36
PRPF40B-215ENST00000551418 LARGE2Q8N3Y3 721 aa23.52■■□□□ 1.36
PRPF40B-215ENST00000551418 TMEM88BA6NKF7 163 aa23.51■■□□□ 1.35
PRPF40B-215ENST00000551418 EPS15P42566 896 aa23.51■■□□□ 1.35
PRPF40B-215ENST00000551418 VEGFBP49765 207 aa23.51■■□□□ 1.35
PRPF40B-215ENST00000551418 RALBP1Q15311 655 aa23.51■■□□□ 1.35
PRPF40B-215ENST00000551418 PARP10Q53GL7 1025 aa23.51■■□□□ 1.35
PRPF40B-215ENST00000551418 XAGE3Q8WTP9 111 aa23.51■■□□□ 1.35
PRPF40B-215ENST00000551418 NLRP3Q96P20 1036 aa23.51■■□□□ 1.35
PRPF40B-215ENST00000551418 UTP14AQ9BVJ6 771 aaKnown RBP23.51■■□□□ 1.35
PRPF40B-215ENST00000551418 LAMB2P55268 1798 aa23.5■■□□□ 1.35
PRPF40B-215ENST00000551418 TAF1P21675 1872 aa23.5■■□□□ 1.35
PRPF40B-215ENST00000551418 EIF6P56537 245 aaKnown RBP23.5■■□□□ 1.35
PRPF40B-215ENST00000551418 DDX10Q13206 875 aaKnown RBP23.5■■□□□ 1.35
PRPF40B-215ENST00000551418 FOXN1O15353 648 aa23.49■■□□□ 1.35
PRPF40B-215ENST00000551418 HCLS1P14317 486 aaPredicted RBP23.49■■□□□ 1.35
PRPF40B-215ENST00000551418 SCNN1DP51172 638 aa23.49■■□□□ 1.35
PRPF40B-215ENST00000551418 PNMA8AQ86V59 439 aaPredicted RBP23.49■■□□□ 1.35
PRPF40B-215ENST00000551418 ANKRD36CQ5JPF3 1778 aa23.48■■□□□ 1.35
PRPF40B-215ENST00000551418 AOC3Q16853 763 aa23.48■■□□□ 1.35
PRPF40B-215ENST00000551418 NLRP10Q86W26 655 aa23.48■■□□□ 1.35
PRPF40B-215ENST00000551418 BABAM1Q9NWV8 329 aa23.48■■□□□ 1.35
PRPF40B-215ENST00000551418 TRIM35Q9UPQ4 493 aa23.48■■□□□ 1.35
PRPF40B-215ENST00000551418 ATP6V0A2Q9Y487 856 aa23.48■■□□□ 1.35
PRPF40B-215ENST00000551418 ABCC4O15439 1325 aa23.48■■□□□ 1.35
PRPF40B-215ENST00000551418 CHL1O00533 1208 aa23.47■■□□□ 1.35
PRPF40B-215ENST00000551418 LAS1LQ9Y4W2 734 aaKnown RBP23.47■■□□□ 1.35
PRPF40B-215ENST00000551418 PPIP5K2O43314 1243 aa23.46■■□□□ 1.35
PRPF40B-215ENST00000551418 TCIRG1Q13488 830 aa23.45■■□□□ 1.34
PRPF40B-215ENST00000551418 NIM1KQ8IY84 436 aa23.45■■□□□ 1.34
PRPF40B-215ENST00000551418 LMOD3Q0VAK6 560 aa23.44■■□□□ 1.34
PRPF40B-215ENST00000551418 GRIPAP1Q4V328 841 aa23.44■■□□□ 1.34
PRPF40B-215ENST00000551418 DDX21Q9NR30 783 aaKnown RBP eCLIP23.44■■□□□ 1.34
PRPF40B-215ENST00000551418 CHPF2Q9P2E5 772 aa23.44■■□□□ 1.34
PRPF40B-215ENST00000551418 MYBBP1AQ9BQG0 1328 aaKnown RBP23.43■■□□□ 1.34
PRPF40B-215ENST00000551418 LMOD1P29536 600 aaPredicted RBP23.43■■□□□ 1.34
PRPF40B-215ENST00000551418 TRMT112Q9UI30 125 aaKnown RBP23.43■■□□□ 1.34
PRPF40B-215ENST00000551418 TRAF5O00463 557 aa23.42■■□□□ 1.34
PRPF40B-215ENST00000551418 CXCL9Q07325 125 aa23.42■■□□□ 1.34
PRPF40B-215ENST00000551418 DEFB115Q30KQ5 88 aa23.42■■□□□ 1.34
PRPF40B-215ENST00000551418 ADAMTS8Q9UP79 889 aa23.42■■□□□ 1.34
PRPF40B-215ENST00000551418 RASSF10A6NK89 507 aa23.41■■□□□ 1.34
PRPF40B-215ENST00000551418 SP8Q8IXZ3 490 aa23.41■■□□□ 1.34
PRPF40B-215ENST00000551418 RUNDC1Q96C34 613 aa23.41■■□□□ 1.34
PRPF40B-215ENST00000551418 RTFDC1Q9BY42 306 aaPredicted RBP23.41■■□□□ 1.34
PRPF40B-215ENST00000551418 BBOX1O75936 387 aa23.4■■□□□ 1.34
PRPF40B-215ENST00000551418 HSP90AB3PQ58FF7 597 aa23.4■■□□□ 1.34
PRPF40B-215ENST00000551418 WBP1LQ9NX94 342 aa23.4■■□□□ 1.34
PRPF40B-215ENST00000551418 ZNRF3Q9ULT6 936 aa23.4■■□□□ 1.34
PRPF40B-215ENST00000551418 ABT1Q9ULW3 272 aaKnown RBP23.4■■□□□ 1.34
PRPF40B-215ENST00000551418 COL4A1P02462 1669 aa23.39■■□□□ 1.34
PRPF40B-215ENST00000551418 CST9Q5W186 159 aa23.39■■□□□ 1.33
PRPF40B-215ENST00000551418 DPP8Q6V1X1 898 aaPredicted RBP23.39■■□□□ 1.33
PRPF40B-215ENST00000551418 MPNDQ8N594 471 aa23.39■■□□□ 1.33
PRPF40B-215ENST00000551418 GPRC5DQ9NZD1 345 aa23.39■■□□□ 1.33
PRPF40B-215ENST00000551418 SH3TC1Q8TE82 1336 aa23.38■■□□□ 1.33
PRPF40B-215ENST00000551418 ATP5J2-PTCD1G3V325 749 aa23.38■■□□□ 1.33
PRPF40B-215ENST00000551418 TMX4Q9H1E5 349 aaPredicted RBP23.38■■□□□ 1.33
PRPF40B-215ENST00000551418 DDX60Q8IY21 1712 aaKnown RBP23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms